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The map label for this gene is ybeB [H]

Identifier: 220903836

GI number: 220903836

Start: 678422

End: 678853

Strand: Direct

Name: ybeB [H]

Synonym: Ddes_0560

Alternate gene names: 220903836

Gene position: 678422-678853 (Clockwise)

Preceding gene: 220903834

Following gene: 220903837

Centisome position: 23.61

GC content: 59.72

Gene sequence:

>432_bases
GTGCTGGCTATGGAAAACAATCATCCCAATACACCCGCCGGGGGCCGCGCCCCCATACAGTTTTCAGATGTTCCCGCGAG
CCGCAAGGCGGCGGATGTGGCCCAATGGCTTGAAGAGCACAAGGCGCTGCGCGTGGTCTGCCTTGACCTTGAAGGTGAAG
GCAGCTTTGCCGACGTCCTTGTTGTGGCCGGCGCAAATTCGGTGCGCCATGCCCAGAGCCTTGCCGACGGCGTGGCCCAG
CTATGCCGCGAACACAACTACGAATTTCTGCGTACAGAAGGGTATGCCACCGGGCAGTGGATTCTTGTGGATATGAACGA
TGTTATCGTCAACATCTTTCAGGAGCCGGTGCGCGAGCTCTACGCCCTTGAAGCCCTGTGGGGGCACGGTTCCGGAAAAG
GCACGGCCGCTGGGCAGAACAGCGGAGAATAA

Upstream 100 bases:

>100_bases
TTTACACCTAGGGGCGGCAGCCCGGGAAAAAGCGAAATCCTCCGCTCGGGCATGCCGCCACCCTGGCAAGCCCATTGCCC
TTGACCCGGCTTTACGGTAT

Downstream 100 bases:

>100_bases
TATCATGACGCCAACACTGCTGCTGATACTGGACGGATGGGGCATTGCCCCTCCTGGGCCTGGCAACGCTCCGTCTGTTG
CCCGTACCCCCAATCTGGAT

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MLAMENNHPNTPAGGRAPIQFSDVPASRKAADVAQWLEEHKALRVVCLDLEGEGSFADVLVVAGANSVRHAQSLADGVAQ
LCREHNYEFLRTEGYATGQWILVDMNDVIVNIFQEPVRELYALEALWGHGSGKGTAAGQNSGE

Sequences:

>Translated_143_residues
MLAMENNHPNTPAGGRAPIQFSDVPASRKAADVAQWLEEHKALRVVCLDLEGEGSFADVLVVAGANSVRHAQSLADGVAQ
LCREHNYEFLRTEGYATGQWILVDMNDVIVNIFQEPVRELYALEALWGHGSGKGTAAGQNSGE
>Mature_143_residues
MLAMENNHPNTPAGGRAPIQFSDVPASRKAADVAQWLEEHKALRVVCLDLEGEGSFADVLVVAGANSVRHAQSLADGVAQ
LCREHNYEFLRTEGYATGQWILVDMNDVIVNIFQEPVRELYALEALWGHGSGKGTAAGQNSGE

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=91, Percent_Identity=38.4615384615385, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 15444; Mature: 15444

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAMENNHPNTPAGGRAPIQFSDVPASRKAADVAQWLEEHKALRVVCLDLEGEGSFADVL
CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEE
VVAGANSVRHAQSLADGVAQLCREHNYEFLRTEGYATGQWILVDMNDVIVNIFQEPVREL
EEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHH
YALEALWGHGSGKGTAAGQNSGE
HHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAMENNHPNTPAGGRAPIQFSDVPASRKAADVAQWLEEHKALRVVCLDLEGEGSFADVL
CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEE
VVAGANSVRHAQSLADGVAQLCREHNYEFLRTEGYATGQWILVDMNDVIVNIFQEPVREL
EEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHH
YALEALWGHGSGKGTAAGQNSGE
HHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]