| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903830
Identifier: 220903830
GI number: 220903830
Start: 667310
End: 668989
Strand: Direct
Name: 220903830
Synonym: Ddes_0554
Alternate gene names: NA
Gene position: 667310-668989 (Clockwise)
Preceding gene: 220903829
Following gene: 220903831
Centisome position: 23.22
GC content: 61.31
Gene sequence:
>1680_bases ATGAATATCGGTTCCTATACATTCGACGAATTCCGGCGCCTGGCGGAAAATTTTCATGGCTATGCCGCGCCTGGTCTGCT TGTGGGCGGGTATATGGTGGAACTCGCCAAAAGGCATATCCCCGAAGGCACGCTTTTCGAGGCCGTGGTGGAATCCGGCA AATGCCTGCCCGACGCCGTGCAACTGCTCACCCTGTGCAGCATCGGCAACGGCTGGATGAAGATACACAATCTGGGGCGC TATGCGGTATCGCTTTTTGACAAGCATACGGGCGAAGGTGTGCGTGTAAGCCTGGACCCGGAAAAAATGGCCGCCTACCC TGAAATCAAGGCATGGTTTTTTAAGGAAAAGCCCAAGAAAGATCAGGATGTTCCGCGCCTTGAATCCGAAATAGAGCAGG CCGGGGACAGCATCTGCACTGTGGAGCCTGTGACCATAAAGCGCCGTTTCATCGGGCATAAGCACATGACACGCATTGTC TGCTGTCCCGGCTGTGGCGAGGCCTATCCGGTGGAAGACGGCCCCGTATGCCGGGGCTGTCAGGGCGAGGCCCCCTATGT GGTGGCACGGCGCGAGATCAAGGCGGCCCCCCGGCAGGAAACCGCCGGCATACGGGTAGTCCCTGTGGAAGAAGCCGTGG GCCATACCGTAGCGCACGACATGACCCGTATAGACCCAGGCCAGTTCAAGGGACCGGAATTCAAGGCCGGGCAGCGCATC AGCGTGGGCGATATATGTCGCCTCCAGCAGATGGGCCGCTTTCATGTGGCGGTTACGGACAGCCCGGTAGGGGAGAGTGA TTTTGCCGCCTATGCTGCGCGAAGCGGCGATACGGTACACGAAAATGAAGCGGCCGAGGCTTTTGCCCGGCGCATGGCTG GTGAGGGCGTGGTTTTTTCGCTGCCGCCCCGCGAGGGCAAGGTAGAATTTACCGCCGGGCGCGCCGGTCTTTTTACCGTG GATGTGGAGCGCATGCGCCGCTTCAACCTGGTGCCCGAGGTTATGGTGGCCTCCCGGCAGGACGCCACTGTGGTCAAACA GGGCGGCCCGCTGGCCGGGACCAGGGCCATACCGCTTTTTATCAGCCGTGAGCGCCTCTCCCAGGCTCTTGAAACGCTGG AAGGTGGCCCGCTTTTCAGCGTACTGCCCCTGCGCAAGGCGCGCGTGGGCATTCTTGTGACAGGCACCGAGGTCTTTCAG GGCATCATTGAAGACAAGTTTATTCCCATTATCACGGCCAAGGTCGCCATGCTGGGCTGCGAGGTGGTCAGGACCGGCAT CGTGCCCGATGACAGGGTCATGATGGGCAAGGCCGTGGCGGAAATGCGTACGGCAGGGGTGGATCTGCTGGTGACCACGG GCGGGCTTTCCGTGGACCCTGATGATGTGACCCGCCAGGCCCTGCTGGACGCCGGGCTTGCCGATGTGCTGCACGGTGTG CCCGTGCTGCCGGGAACCATGAGCCTTATCGGTCGCATACCCGGTCCCGGTGGCGGCATGCAGGTGCTTGGCGTACCCGC CTGCGCCCTGTACTTCAAGACCACGTTTCTGGATCTTGTGCTGCCGCGCCTTCTGGCCGGGCGCGAGATTACCCGTGCCG AGCTTGCCCGCCTGGGTGAGGGCGGCTATTGCCTGGCCTGTCACACATGCACCTGGCCCAAATGCTGGTTTGGTAAATAG
Upstream 100 bases:
>100_bases AAAGCGGCGCACAGGTAGCCAGAACAGACGAATTGGCTTACACAAGGTCAAAACAGCATTTGCATCCGCTCCCGCAGGGG CAGCAGCATTGGAGAAAAGC
Downstream 100 bases:
>100_bases TGGAGTAAAATCCGCAGCTTCATATTCTGCTCAACGGCCTGTGAAAAAGTTTTCGCAGGCCGTTTTTTGGGCGCTTTTGC GGCCGGGGCCGCCCTGTTGA
Product: formylmethanofuran dehydrogenase subunit E
Products: NA
Alternate protein names: Formylmethanofuran Dehydrogenase Subunit E Region; 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Synthase; Formylmethanofuran Dehydrogenase Subunit E; Molybdenum Cofactor Biosynthesis Protein; Molybdenum Formylmethanofuran Dehydrogenase Subunit E; Molybdenum Cofactor Cytidylyltransferase; TUNGsten Formylmethanofuran Dehydrogenase Subunit E; Molybdopterin Biosynthesis; Molybdenum Cofactor Synthesis Domain Protein; Protein Family UPF; L-Seryl-TRNA(Ser) Selenium Transferase Protein; Molybdopterin Biosynthesis Protein MoeA; Transcriptional Regulator Fis Family; Molybdenum Cofactor Biosynthesis Family Protein
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MNIGSYTFDEFRRLAENFHGYAAPGLLVGGYMVELAKRHIPEGTLFEAVVESGKCLPDAVQLLTLCSIGNGWMKIHNLGR YAVSLFDKHTGEGVRVSLDPEKMAAYPEIKAWFFKEKPKKDQDVPRLESEIEQAGDSICTVEPVTIKRRFIGHKHMTRIV CCPGCGEAYPVEDGPVCRGCQGEAPYVVARREIKAAPRQETAGIRVVPVEEAVGHTVAHDMTRIDPGQFKGPEFKAGQRI SVGDICRLQQMGRFHVAVTDSPVGESDFAAYAARSGDTVHENEAAEAFARRMAGEGVVFSLPPREGKVEFTAGRAGLFTV DVERMRRFNLVPEVMVASRQDATVVKQGGPLAGTRAIPLFISRERLSQALETLEGGPLFSVLPLRKARVGILVTGTEVFQ GIIEDKFIPIITAKVAMLGCEVVRTGIVPDDRVMMGKAVAEMRTAGVDLLVTTGGLSVDPDDVTRQALLDAGLADVLHGV PVLPGTMSLIGRIPGPGGGMQVLGVPACALYFKTTFLDLVLPRLLAGREITRAELARLGEGGYCLACHTCTWPKCWFGK
Sequences:
>Translated_559_residues MNIGSYTFDEFRRLAENFHGYAAPGLLVGGYMVELAKRHIPEGTLFEAVVESGKCLPDAVQLLTLCSIGNGWMKIHNLGR YAVSLFDKHTGEGVRVSLDPEKMAAYPEIKAWFFKEKPKKDQDVPRLESEIEQAGDSICTVEPVTIKRRFIGHKHMTRIV CCPGCGEAYPVEDGPVCRGCQGEAPYVVARREIKAAPRQETAGIRVVPVEEAVGHTVAHDMTRIDPGQFKGPEFKAGQRI SVGDICRLQQMGRFHVAVTDSPVGESDFAAYAARSGDTVHENEAAEAFARRMAGEGVVFSLPPREGKVEFTAGRAGLFTV DVERMRRFNLVPEVMVASRQDATVVKQGGPLAGTRAIPLFISRERLSQALETLEGGPLFSVLPLRKARVGILVTGTEVFQ GIIEDKFIPIITAKVAMLGCEVVRTGIVPDDRVMMGKAVAEMRTAGVDLLVTTGGLSVDPDDVTRQALLDAGLADVLHGV PVLPGTMSLIGRIPGPGGGMQVLGVPACALYFKTTFLDLVLPRLLAGREITRAELARLGEGGYCLACHTCTWPKCWFGK >Mature_559_residues MNIGSYTFDEFRRLAENFHGYAAPGLLVGGYMVELAKRHIPEGTLFEAVVESGKCLPDAVQLLTLCSIGNGWMKIHNLGR YAVSLFDKHTGEGVRVSLDPEKMAAYPEIKAWFFKEKPKKDQDVPRLESEIEQAGDSICTVEPVTIKRRFIGHKHMTRIV CCPGCGEAYPVEDGPVCRGCQGEAPYVVARREIKAAPRQETAGIRVVPVEEAVGHTVAHDMTRIDPGQFKGPEFKAGQRI SVGDICRLQQMGRFHVAVTDSPVGESDFAAYAARSGDTVHENEAAEAFARRMAGEGVVFSLPPREGKVEFTAGRAGLFTV DVERMRRFNLVPEVMVASRQDATVVKQGGPLAGTRAIPLFISRERLSQALETLEGGPLFSVLPLRKARVGILVTGTEVFQ GIIEDKFIPIITAKVAMLGCEVVRTGIVPDDRVMMGKAVAEMRTAGVDLLVTTGGLSVDPDDVTRQALLDAGLADVLHGV PVLPGTMSLIGRIPGPGGGMQVLGVPACALYFKTTFLDLVLPRLLAGREITRAELARLGEGGYCLACHTCTWPKCWFGK
Specific function: Unknown
COG id: COG0303
COG function: function code H; Molybdopterin biosynthesis enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60584; Mature: 60584
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIGSYTFDEFRRLAENFHGYAAPGLLVGGYMVELAKRHIPEGTLFEAVVESGKCLPDAV CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHH QLLTLCSIGNGWMKIHNLGRYAVSLFDKHTGEGVRVSLDPEKMAAYPEIKAWFFKEKPKK HHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCHHHHHCCCCCCC DQDVPRLESEIEQAGDSICTVEPVTIKRRFIGHKHMTRIVCCPGCGEAYPVEDGPVCRGC CCCCHHHHHHHHHCCCCEEEECCHHHHHHHHCHHHCEEEEECCCCCCCCCCCCCCCCCCC QGEAPYVVARREIKAAPRQETAGIRVVPVEEAVGHTVAHDMTRIDPGQFKGPEFKAGQRI CCCCCEEEEHHHHHCCCCCHHCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SVGDICRLQQMGRFHVAVTDSPVGESDFAAYAARSGDTVHENEAAEAFARRMAGEGVVFS CHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEE LPPREGKVEFTAGRAGLFTVDVERMRRFNLVPEVMVASRQDATVVKQGGPLAGTRAIPLF CCCCCCCEEEEECCCCEEEEEHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCEEEE ISRERLSQALETLEGGPLFSVLPLRKARVGILVTGTEVFQGIIEDKFIPIITAKVAMLGC EEHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHH EVVRTGIVPDDRVMMGKAVAEMRTAGVDLLVTTGGLSVDPDDVTRQALLDAGLADVLHGV HHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHCCC PVLPGTMSLIGRIPGPGGGMQVLGVPACALYFKTTFLDLVLPRLLAGREITRAELARLGE CCCCCHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC GGYCLACHTCTWPKCWFGK CCEEEEEECCCCCCCCCCC >Mature Secondary Structure MNIGSYTFDEFRRLAENFHGYAAPGLLVGGYMVELAKRHIPEGTLFEAVVESGKCLPDAV CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHH QLLTLCSIGNGWMKIHNLGRYAVSLFDKHTGEGVRVSLDPEKMAAYPEIKAWFFKEKPKK HHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCHHHHHCCCCCCC DQDVPRLESEIEQAGDSICTVEPVTIKRRFIGHKHMTRIVCCPGCGEAYPVEDGPVCRGC CCCCHHHHHHHHHCCCCEEEECCHHHHHHHHCHHHCEEEEECCCCCCCCCCCCCCCCCCC QGEAPYVVARREIKAAPRQETAGIRVVPVEEAVGHTVAHDMTRIDPGQFKGPEFKAGQRI CCCCCEEEEHHHHHCCCCCHHCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SVGDICRLQQMGRFHVAVTDSPVGESDFAAYAARSGDTVHENEAAEAFARRMAGEGVVFS CHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEE LPPREGKVEFTAGRAGLFTVDVERMRRFNLVPEVMVASRQDATVVKQGGPLAGTRAIPLF CCCCCCCEEEEECCCCEEEEEHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCCCEEEE ISRERLSQALETLEGGPLFSVLPLRKARVGILVTGTEVFQGIIEDKFIPIITAKVAMLGC EEHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHH EVVRTGIVPDDRVMMGKAVAEMRTAGVDLLVTTGGLSVDPDDVTRQALLDAGLADVLHGV HHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHCCC PVLPGTMSLIGRIPGPGGGMQVLGVPACALYFKTTFLDLVLPRLLAGREITRAELARLGE CCCCCHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC GGYCLACHTCTWPKCWFGK CCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA