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The map label for this gene is yebC [C]

Identifier: 220903813

GI number: 220903813

Start: 646886

End: 647623

Strand: Reverse

Name: yebC [C]

Synonym: Ddes_0536

Alternate gene names: 220903813

Gene position: 647623-646886 (Counterclockwise)

Preceding gene: 220903814

Following gene: 220903812

Centisome position: 22.54

GC content: 57.72

Gene sequence:

>738_bases
ATGGCTGGTCACAGTAAATGGGCCAATATTCAGCATCGTAAGGGCCGTCAGGACGCAAAACGCGGCAAGCTGTTCACCAA
GGCCGCCAAAGAAATTATCATTGCCGCCAAGGGCGGCGGCGATCCCTCGATGAACCCCCGCCTGCGCGCTGCCATAGCTG
CGGCCAAGGCCGTAAACCTGCCCAAGGACAAAATCGAGGCCGCCATCCGCAAGGGAACCGGCGAAGACGCCGGCGGCGAC
CTTACCGAAACCTTCTATGAAGGCTATGGCCCCGGCGGCATTGCCGTCATGGTCGAAGTAGCTACCGATAACAAAAACCG
CACCGTGGCCGAAGTGCGCCACCTCTTTTCCAAGCATGGCGGCTCCATGGGTGAAAACGGCAGCGTTGCATGGATGTTCG
ACCGCAAGGGCGTCATCAGTGTTGAAAAAAGCGCCTACCCCGAAGAAAAAATAATGGAAGCCGCCCTGGAAGCCGGGGCT
GACGACGTTATTGATGATGGGGAGGAATGGACCATCCATACGGCCATGACCGATTTTACCGCCGTGCGCGATTCGCTGGA
AACAGCGGGCATTGTCATGCAGTCCGCCGAGCTTGCCATGGTCCCGCAGAATCTGGTGGCTGTCGATGCCGACATGGGCC
AGAAAGTACTGCGCCTCATGGATGCCCTGGACGATAATGACGACGTGCAAAACGTCTACGCCAACGTCGACTTTCCTGAA
GATATGCCCGAAGACTAG

Upstream 100 bases:

>100_bases
TGTGGGCCTTGGCTTTCGCGGCAAGCCGAACCAGACCGACCCTGTGGCCACGCCGCCGGGCAGGTAAAACAATTTATTCC
CTAAAGGTTTCGGAGGTTTT

Downstream 100 bases:

>100_bases
GGCCTGCTGTTTGAAATGCGCGGCAAGGACCTGAAAAACGGGGGCTTGCCGCGCAAGAGCTGCGAGCGCGCCTTGCCCCC
CGCCGTCAGGCATCGCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MAGHSKWANIQHRKGRQDAKRGKLFTKAAKEIIIAAKGGGDPSMNPRLRAAIAAAKAVNLPKDKIEAAIRKGTGEDAGGD
LTETFYEGYGPGGIAVMVEVATDNKNRTVAEVRHLFSKHGGSMGENGSVAWMFDRKGVISVEKSAYPEEKIMEAALEAGA
DDVIDDGEEWTIHTAMTDFTAVRDSLETAGIVMQSAELAMVPQNLVAVDADMGQKVLRLMDALDDNDDVQNVYANVDFPE
DMPED

Sequences:

>Translated_245_residues
MAGHSKWANIQHRKGRQDAKRGKLFTKAAKEIIIAAKGGGDPSMNPRLRAAIAAAKAVNLPKDKIEAAIRKGTGEDAGGD
LTETFYEGYGPGGIAVMVEVATDNKNRTVAEVRHLFSKHGGSMGENGSVAWMFDRKGVISVEKSAYPEEKIMEAALEAGA
DDVIDDGEEWTIHTAMTDFTAVRDSLETAGIVMQSAELAMVPQNLVAVDADMGQKVLRLMDALDDNDDVQNVYANVDFPE
DMPED
>Mature_244_residues
AGHSKWANIQHRKGRQDAKRGKLFTKAAKEIIIAAKGGGDPSMNPRLRAAIAAAKAVNLPKDKIEAAIRKGTGEDAGGDL
TETFYEGYGPGGIAVMVEVATDNKNRTVAEVRHLFSKHGGSMGENGSVAWMFDRKGVISVEKSAYPEEKIMEAALEAGAD
DVIDDGEEWTIHTAMTDFTAVRDSLETAGIVMQSAELAMVPQNLVAVDADMGQKVLRLMDALDDNDDVQNVYANVDFPED
MPED

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=32.7935222672065, Blast_Score=138, Evalue=5e-33,
Organism=Escherichia coli, GI1788171, Length=245, Percent_Identity=53.469387755102, Blast_Score=254, Evalue=5e-69,
Organism=Escherichia coli, GI1788294, Length=239, Percent_Identity=42.2594142259414, Blast_Score=146, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=25, Blast_Score=74, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=34.9809885931559, Blast_Score=127, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=25.3012048192771, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y536_DESDA (B8J4I9)

Other databases:

- EMBL:   CP001358
- RefSeq:   YP_002479125.1
- ProteinModelPortal:   B8J4I9
- GeneID:   7284203
- GenomeReviews:   CP001358_GR
- KEGG:   dds:Ddes_0536
- HOGENOM:   HBG715231
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26394; Mature: 26263

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIQHRKGRQDAKRGKLFTKAAKEIIIAAKGGGDPSMNPRLRAAIAAAKAVNL
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCC
PKDKIEAAIRKGTGEDAGGDLTETFYEGYGPGGIAVMVEVATDNKNRTVAEVRHLFSKHG
CHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC
GSMGENGSVAWMFDRKGVISVEKSAYPEEKIMEAALEAGADDVIDDGEEWTIHTAMTDFT
CCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCHHHCCCCCEEEEHHHHHHH
AVRDSLETAGIVMQSAELAMVPQNLVAVDADMGQKVLRLMDALDDNDDVQNVYANVDFPE
HHHHHHHHHHHHHHCCHHEECCCHHEEECHHHHHHHHHHHHHCCCCCCHHHHEECCCCCC
DMPED
CCCCC
>Mature Secondary Structure 
AGHSKWANIQHRKGRQDAKRGKLFTKAAKEIIIAAKGGGDPSMNPRLRAAIAAAKAVNL
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCC
PKDKIEAAIRKGTGEDAGGDLTETFYEGYGPGGIAVMVEVATDNKNRTVAEVRHLFSKHG
CHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC
GSMGENGSVAWMFDRKGVISVEKSAYPEEKIMEAALEAGADDVIDDGEEWTIHTAMTDFT
CCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCHHHCCCCCEEEEHHHHHHH
AVRDSLETAGIVMQSAELAMVPQNLVAVDADMGQKVLRLMDALDDNDDVQNVYANVDFPE
HHHHHHHHHHHHHHCCHHEECCCHHEEECHHHHHHHHHHHHHCCCCCCHHHHEECCCCCC
DMPED
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA