| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is nadD [H]
Identifier: 220903718
GI number: 220903718
Start: 532134
End: 532874
Strand: Reverse
Name: nadD [H]
Synonym: Ddes_0440
Alternate gene names: 220903718
Gene position: 532874-532134 (Counterclockwise)
Preceding gene: 220903719
Following gene: 220903717
Centisome position: 18.54
GC content: 63.7
Gene sequence:
>741_bases GTGACCATACGGCGCACTCTGCGGCCCACAGCAGACTCTGCAAGCCCGCCCACGGGACGGGCCATCCTGGGGGGCAGTTT TAATCCGCCCCACGTGGGACATCTGCGGCTGGCCATTGAGGCCGCCGAAGCCCTGGCATCCCTGACCGACGGTGTTGACC TGATTCCCTGTGCGGTGCCGCCGCACAAGGCCATGATCGGCATGCTGCCCTTTGACCTGCGCGCCCGGATGCTGGAAGCC AGCATAGCGGATCTGCCTTTTCTGCGCTGTAACAGGCTTGAAGGCCAACGCCGGGGACCGTCCTATACCTGGGATACCCT GCTTGCCTACCGCGAGGCCGCTCCGGATACAGAGCTTTACTTCATACTCGGCAGCCCGGACTTTGCCCTGCTGCCCACCT GGCACAGGGGTCTGGAACTGCCCGGCCTGTGCCACTTCGTTGTCGTGCCGCGAGACGGGCAGGACGGCCGTGACATGGCA ACCACCGCCACTCGCCTGTGGCCCGAGGCCGAAGAGTGTGAACCGCTGGTGGGCGAAGGTCCCTGTATGGTCTTGCCTGG TGGAGGCATGGCGCATTTTTTGCCCTTACCGTGGCTTGATGTGAGCGCATCGCGCCTGCGCGCCTTGTGGCTGGCACACC GGAGAGTGGATTTTCTGCTGCCCCGGGCGGCTTTTGAAATCCTGCGTGAAAGCGAAGAAACCGTGCGAACACACTGGCAA CAGGCAGGAAGCCCATGCTGA
Upstream 100 bases:
>100_bases GCATATCCACCTCCAAGCTGCATGCTTACGGGGCCATGGGCGTTGAAGAACTGACCACCACCAAATTTGTGGTGTTGGGG CAGGGGCAGGTGCGGCAGTA
Downstream 100 bases:
>100_bases CAACTGCCCCCAAGGATATACGTGAAAACATTGCCCGCGCTGTAGGCTACTTGCGGCGGGATGAAGTGGAACGTTCCCTG CTGGCCATGAGCGAAGCCCT
Product: cytidyltransferase-like domain-containing protein
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTIRRTLRPTADSASPPTGRAILGGSFNPPHVGHLRLAIEAAEALASLTDGVDLIPCAVPPHKAMIGMLPFDLRARMLEA SIADLPFLRCNRLEGQRRGPSYTWDTLLAYREAAPDTELYFILGSPDFALLPTWHRGLELPGLCHFVVVPRDGQDGRDMA TTATRLWPEAEECEPLVGEGPCMVLPGGGMAHFLPLPWLDVSASRLRALWLAHRRVDFLLPRAAFEILRESEETVRTHWQ QAGSPC
Sequences:
>Translated_246_residues MTIRRTLRPTADSASPPTGRAILGGSFNPPHVGHLRLAIEAAEALASLTDGVDLIPCAVPPHKAMIGMLPFDLRARMLEA SIADLPFLRCNRLEGQRRGPSYTWDTLLAYREAAPDTELYFILGSPDFALLPTWHRGLELPGLCHFVVVPRDGQDGRDMA TTATRLWPEAEECEPLVGEGPCMVLPGGGMAHFLPLPWLDVSASRLRALWLAHRRVDFLLPRAAFEILRESEETVRTHWQ QAGSPC >Mature_245_residues TIRRTLRPTADSASPPTGRAILGGSFNPPHVGHLRLAIEAAEALASLTDGVDLIPCAVPPHKAMIGMLPFDLRARMLEAS IADLPFLRCNRLEGQRRGPSYTWDTLLAYREAAPDTELYFILGSPDFALLPTWHRGLELPGLCHFVVVPRDGQDGRDMAT TATRLWPEAEECEPLVGEGPCMVLPGGGMAHFLPLPWLDVSASRLRALWLAHRRVDFLLPRAAFEILRESEETVRTHWQQ AGSPC
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
Organism=Escherichia coli, GI1786858, Length=213, Percent_Identity=30.9859154929577, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR019450 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF10362 DUF2432 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 27158; Mature: 27026
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRRTLRPTADSASPPTGRAILGGSFNPPHVGHLRLAIEAAEALASLTDGVDLIPCAVP CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCC PHKAMIGMLPFDLRARMLEASIADLPFLRCNRLEGQRRGPSYTWDTLLAYREAAPDTELY CHHHHEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEE FILGSPDFALLPTWHRGLELPGLCHFVVVPRDGQDGRDMATTATRLWPEAEECEPLVGEG EEECCCCEEECCCHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCHHHCCCCCCCC PCMVLPGGGMAHFLPLPWLDVSASRLRALWLAHRRVDFLLPRAAFEILRESEETVRTHWQ CEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH QAGSPC HCCCCC >Mature Secondary Structure TIRRTLRPTADSASPPTGRAILGGSFNPPHVGHLRLAIEAAEALASLTDGVDLIPCAVP CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCC PHKAMIGMLPFDLRARMLEASIADLPFLRCNRLEGQRRGPSYTWDTLLAYREAAPDTELY CHHHHEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEE FILGSPDFALLPTWHRGLELPGLCHFVVVPRDGQDGRDMATTATRLWPEAEECEPLVGEG EEECCCCEEECCCHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCHHHCCCCCCCC PCMVLPGGGMAHFLPLPWLDVSASRLRALWLAHRRVDFLLPRAAFEILRESEETVRTHWQ CEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH QAGSPC HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA