| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220903714
Identifier: 220903714
GI number: 220903714
Start: 528605
End: 529138
Strand: Direct
Name: 220903714
Synonym: Ddes_0436
Alternate gene names: NA
Gene position: 528605-529138 (Clockwise)
Preceding gene: 220903713
Following gene: 220903715
Centisome position: 18.4
GC content: 37.08
Gene sequence:
>534_bases ATGGCAGCTAAACCTAAAAGCCCTACTGCCAAATCGGCGACGAAAGACAAAGGATCTGTCAAAAAAGTAAATTTTTTGCA GGAATTAATGTGGGTTTTTGAAAGGTATGGTTTTTCACAAGTAAAGGAATTTATTTCCGATCTAGAGCGTGATGTATCGA GCAATATTCAACAGGAATTCGGGTTACAAGAGTTTGCTCCCAAAAATCCCAATCAACTATTTCTTGTTGGTGTATTGCCA AAAATTTTCTCCGATGCGAAAATTTTTTCATCCAATGAGGAAATTGCAAATTTCTCTGAAGATATTTTGAAGGTCAAAAT ATCTAGATGGGAAAAAAAATCGCGCCTAGAGCTAATCGGGCATATTGTTTGTAGCACTGCTCAAGCTGATGACAAAAAGC TGGAGCAAATAGCAACTGCCTTAAAAAAACTGCATTCTGGTAGAAAAGATGCAGATATATTTCTGGAGAAAAGTCGGCAG GATAAAAAAAGCTGGAATGAGATTATCCAATTATTGCTCCAGAGTGACCAATGA
Upstream 100 bases:
>100_bases CGGGCGCAAGGTGAACAAGGCTTAATCTTAGACGGCACAGATCCTTTATCCAAGTCAGAACTCATAAAAATTGCCGAAGA ATTCTTGAGGAGAGTGGGAC
Downstream 100 bases:
>100_bases AAAATATTGTTGGTGAATCGTTTGCAAAAGTCTTATCTTTTGCAAACGACTTTAAACTAAGTCCAGCATTATCTAATGAA AAGCTTCTTGCGATTTCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MAAKPKSPTAKSATKDKGSVKKVNFLQELMWVFERYGFSQVKEFISDLERDVSSNIQQEFGLQEFAPKNPNQLFLVGVLP KIFSDAKIFSSNEEIANFSEDILKVKISRWEKKSRLELIGHIVCSTAQADDKKLEQIATALKKLHSGRKDADIFLEKSRQ DKKSWNEIIQLLLQSDQ
Sequences:
>Translated_177_residues MAAKPKSPTAKSATKDKGSVKKVNFLQELMWVFERYGFSQVKEFISDLERDVSSNIQQEFGLQEFAPKNPNQLFLVGVLP KIFSDAKIFSSNEEIANFSEDILKVKISRWEKKSRLELIGHIVCSTAQADDKKLEQIATALKKLHSGRKDADIFLEKSRQ DKKSWNEIIQLLLQSDQ >Mature_176_residues AAKPKSPTAKSATKDKGSVKKVNFLQELMWVFERYGFSQVKEFISDLERDVSSNIQQEFGLQEFAPKNPNQLFLVGVLPK IFSDAKIFSSNEEIANFSEDILKVKISRWEKKSRLELIGHIVCSTAQADDKKLEQIATALKKLHSGRKDADIFLEKSRQD KKSWNEIIQLLLQSDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20233; Mature: 20102
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKPKSPTAKSATKDKGSVKKVNFLQELMWVFERYGFSQVKEFISDLERDVSSNIQQEF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GLQEFAPKNPNQLFLVGVLPKIFSDAKIFSSNEEIANFSEDILKVKISRWEKKSRLELIG CHHHCCCCCCCCEEEHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HIVCSTAQADDKKLEQIATALKKLHSGRKDADIFLEKSRQDKKSWNEIIQLLLQSDQ HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAKPKSPTAKSATKDKGSVKKVNFLQELMWVFERYGFSQVKEFISDLERDVSSNIQQEF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GLQEFAPKNPNQLFLVGVLPKIFSDAKIFSSNEEIANFSEDILKVKISRWEKKSRLELIG CHHHCCCCCCCCEEEHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HIVCSTAQADDKKLEQIATALKKLHSGRKDADIFLEKSRQDKKSWNEIIQLLLQSDQ HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA