Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903712

Identifier: 220903712

GI number: 220903712

Start: 525615

End: 527510

Strand: Reverse

Name: 220903712

Synonym: Ddes_0434

Alternate gene names: NA

Gene position: 527510-525615 (Counterclockwise)

Preceding gene: 220903717

Following gene: 220903707

Centisome position: 18.36

GC content: 57.38

Gene sequence:

>1896_bases
ATGCCAGCTTACGCCGTTCTGCGTATCCAAAAGCTCAAGTCCTGGGGCGACATCGCCGGATCGGACGCTCACAACTACCG
GGAGCGTGAAACACCCAATGCGGACGCCGAGCGCACTCCGGACAACTCCACCTTTGCCGGCAACCCTGAGCAAGATTCCG
TGGCAGCCATCAAAGCCGCCATCGGCAATCAGAACATCCGCAAGAATGCCGTGCTGGCCGTGGAAATGCTTTTGAGTGCC
AGCCCCGAACACTTCCGGCCCGACGACAAGAGCAAGGCGGGCAGCTATGACCTTTCCCGCGCATGGGAATGGGCGGAAAC
ATCCGCTCAATGGCTGCGTGAGCGTTACGGCAACCGGGTTATCAAAGCTGTCATGCATCTGGACGAAGCCACGCCGCACA
TGCACGCCACCATTGTTCCCCTGGACGATAAAGGCAAACTGAACTGCCGCGCCCTGTTTGGTGGAACCCGGCACACGCTT
ACTGACCTTCAGACCGACTACGCCAAAGCGGTTGAAAAGCTTGGCATTGAGCGCGGCTTGCAGGGCAGCTGGGCAAAGCA
TCAAGACGTTGCCAAGTTCTACGCCATCACCCAGAACCAAGAGCACCCCGCAGTGCCCCGCGCAAAGGGCGTTGACATTC
CCCCTCTGCCCGGACGTGTGGAGCGCCTTTCTGATTCGGTGCTGACCCGCTTTGCTCAGGAAGTGGCGGCTTCTGCCATT
GATGCCCAACAAGATAAAACAGTTCCTGCCTTGCAGATGCTTACCGGAGAAAATGCCATGCTGAAAAAGCAGACCGAGGA
CTTACGCCGCAGCAATGCCGCGCTCAGTCAGGAACGCGATCGCCTGAAGCGTGAAGCGGATCAGCTGCGTGGCTGGCCCC
TGCCTGAAGTGTTGACGCAGCTATACGGCGCTCGTGAAGCCTCAGACAGCAAGGCCAGCTATAAGAGCCGTAAGTTTGAA
TTGCCCGATGGAACAAAAATAGGCGTTACTGATGACCTTTGGCATGATAATACAAACAATGTGGGCAAGAAGGGAGCTAT
CAACCTTGTTATGCACCTTTCAGGCTATGGTCAGGAGCAGTATAAACAGGCTGTGCGCGACCTTGCGGACGCTTTCGGCT
CTGACGCAGCCAACCGGGCTGTTTCGCGCCATATCATCAACACCGCCCCCAAACAGGCCGAGCGCATCACTCTTGAATCC
ATCAAGGAGCCTGCACAGCTTCCGCAGCCTTGCCCGGAGACATGGCAGCGGGTGCGCGGCTATCTGACCAAGGAGCGCAA
ACTACCCGGCAAACTCATTGATGCCGTCCACTGCCAAGGGCTTGTGTACAGTGACCAGCGGACAAACTGCGTCTTTCCGT
GTGACAAAGAGAGCGGTGCCTTTCTGCGCGGCTCAGGCAAACAGCCCTTCAAGCGGACTATGGGGCAGGGGCATTTGCCG
TTCCACCTGAAAGGAGAAGACAGTAAAGTTATGGTAGCGGAAAGCGCCATTGATGCGCTTTCGCTCAAGGCCCTGTACCC
GGCAAGCTCGGTCATTGCTACAGGCGGCAACATGCCGCCGGAACGGCTGAAGCCCTATCTTAATGGCAAAGAGGTGTACC
TTGCCCATGATGCGGATAAGGCAGGGGAAGCCCAGGCCGCCCGCATTCAGGAGCACTACCCGGAGGCAAAACGCCTATGC
CCCCACGGGGCAAAGATTGGAATGAATATTTGCAGAAAAAGCAGGAACGGGAAATACAGCCTGAGCGGCAACGGCAAGTG
GATATGGAACGCTGAATGCCCTTACTCGCTCCCTTCCGGCAGTTGCGGAATATCGGCCTCAACCCGTCCGATCAGTTCCG
CCGCCGTCATGCCCAACGCCTCTGAAATCAATACCAAGGACGCCAGCGAAGGCTGA

Upstream 100 bases:

>100_bases
CGGGTTTGCTGAAAGGTGAAATCCCCGCCTGTTATAGACAGATGATTACTCATCTTTACGCAACAGGCAGTGAAAGGCAA
CCAGTAGGAAAAGAAAAATA

Downstream 100 bases:

>100_bases
TTTTTCTGCCGCTCCAAAAGCGAAATGGCGGAACGATCCATGCCGCATTGCGCCGCAAGCTGTTCCTGAGACAGCCCTGC
CTCTACGCGCAATGTGCGTA

Product: plasmid recombination protein

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 631; Mature: 630

Protein sequence:

>631_residues
MPAYAVLRIQKLKSWGDIAGSDAHNYRERETPNADAERTPDNSTFAGNPEQDSVAAIKAAIGNQNIRKNAVLAVEMLLSA
SPEHFRPDDKSKAGSYDLSRAWEWAETSAQWLRERYGNRVIKAVMHLDEATPHMHATIVPLDDKGKLNCRALFGGTRHTL
TDLQTDYAKAVEKLGIERGLQGSWAKHQDVAKFYAITQNQEHPAVPRAKGVDIPPLPGRVERLSDSVLTRFAQEVAASAI
DAQQDKTVPALQMLTGENAMLKKQTEDLRRSNAALSQERDRLKREADQLRGWPLPEVLTQLYGAREASDSKASYKSRKFE
LPDGTKIGVTDDLWHDNTNNVGKKGAINLVMHLSGYGQEQYKQAVRDLADAFGSDAANRAVSRHIINTAPKQAERITLES
IKEPAQLPQPCPETWQRVRGYLTKERKLPGKLIDAVHCQGLVYSDQRTNCVFPCDKESGAFLRGSGKQPFKRTMGQGHLP
FHLKGEDSKVMVAESAIDALSLKALYPASSVIATGGNMPPERLKPYLNGKEVYLAHDADKAGEAQAARIQEHYPEAKRLC
PHGAKIGMNICRKSRNGKYSLSGNGKWIWNAECPYSLPSGSCGISASTRPISSAAVMPNASEINTKDASEG

Sequences:

>Translated_631_residues
MPAYAVLRIQKLKSWGDIAGSDAHNYRERETPNADAERTPDNSTFAGNPEQDSVAAIKAAIGNQNIRKNAVLAVEMLLSA
SPEHFRPDDKSKAGSYDLSRAWEWAETSAQWLRERYGNRVIKAVMHLDEATPHMHATIVPLDDKGKLNCRALFGGTRHTL
TDLQTDYAKAVEKLGIERGLQGSWAKHQDVAKFYAITQNQEHPAVPRAKGVDIPPLPGRVERLSDSVLTRFAQEVAASAI
DAQQDKTVPALQMLTGENAMLKKQTEDLRRSNAALSQERDRLKREADQLRGWPLPEVLTQLYGAREASDSKASYKSRKFE
LPDGTKIGVTDDLWHDNTNNVGKKGAINLVMHLSGYGQEQYKQAVRDLADAFGSDAANRAVSRHIINTAPKQAERITLES
IKEPAQLPQPCPETWQRVRGYLTKERKLPGKLIDAVHCQGLVYSDQRTNCVFPCDKESGAFLRGSGKQPFKRTMGQGHLP
FHLKGEDSKVMVAESAIDALSLKALYPASSVIATGGNMPPERLKPYLNGKEVYLAHDADKAGEAQAARIQEHYPEAKRLC
PHGAKIGMNICRKSRNGKYSLSGNGKWIWNAECPYSLPSGSCGISASTRPISSAAVMPNASEINTKDASEG
>Mature_630_residues
PAYAVLRIQKLKSWGDIAGSDAHNYRERETPNADAERTPDNSTFAGNPEQDSVAAIKAAIGNQNIRKNAVLAVEMLLSAS
PEHFRPDDKSKAGSYDLSRAWEWAETSAQWLRERYGNRVIKAVMHLDEATPHMHATIVPLDDKGKLNCRALFGGTRHTLT
DLQTDYAKAVEKLGIERGLQGSWAKHQDVAKFYAITQNQEHPAVPRAKGVDIPPLPGRVERLSDSVLTRFAQEVAASAID
AQQDKTVPALQMLTGENAMLKKQTEDLRRSNAALSQERDRLKREADQLRGWPLPEVLTQLYGAREASDSKASYKSRKFEL
PDGTKIGVTDDLWHDNTNNVGKKGAINLVMHLSGYGQEQYKQAVRDLADAFGSDAANRAVSRHIINTAPKQAERITLESI
KEPAQLPQPCPETWQRVRGYLTKERKLPGKLIDAVHCQGLVYSDQRTNCVFPCDKESGAFLRGSGKQPFKRTMGQGHLPF
HLKGEDSKVMVAESAIDALSLKALYPASSVIATGGNMPPERLKPYLNGKEVYLAHDADKAGEAQAARIQEHYPEAKRLCP
HGAKIGMNICRKSRNGKYSLSGNGKWIWNAECPYSLPSGSCGISASTRPISSAAVMPNASEINTKDASEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001668
- InterPro:   IPR006171
- InterPro:   IPR002694 [H]

Pfam domain/function: PF01076 Mob_Pre; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 69447; Mature: 69316

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAYAVLRIQKLKSWGDIAGSDAHNYRERETPNADAERTPDNSTFAGNPEQDSVAAIKAA
CCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
IGNQNIRKNAVLAVEMLLSASPEHFRPDDKSKAGSYDLSRAWEWAETSAQWLRERYGNRV
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IKAVMHLDEATPHMHATIVPLDDKGKLNCRALFGGTRHTLTDLQTDYAKAVEKLGIERGL
HHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
QGSWAKHQDVAKFYAITQNQEHPAVPRAKGVDIPPLPGRVERLSDSVLTRFAQEVAASAI
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DAQQDKTVPALQMLTGENAMLKKQTEDLRRSNAALSQERDRLKREADQLRGWPLPEVLTQ
HHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LYGAREASDSKASYKSRKFELPDGTKIGVTDDLWHDNTNNVGKKGAINLVMHLSGYGQEQ
HHCCCCCCCCHHHHHHCEEECCCCCEECCCHHCCCCCCCCCCCCCCEEEEEEECCCCHHH
YKQAVRDLADAFGSDAANRAVSRHIINTAPKQAERITLESIKEPAQLPQPCPETWQRVRG
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCHHHHHHHHH
YLTKERKLPGKLIDAVHCQGLVYSDQRTNCVFPCDKESGAFLRGSGKQPFKRTMGQGHLP
HHHHHHCCCHHHHHHHHHCCEEECCCCCCEEECCCCCCCCEEECCCCCHHHHHCCCCCCC
FHLKGEDSKVMVAESAIDALSLKALYPASSVIATGGNMPPERLKPYLNGKEVYLAHDADK
EEEECCCCEEEEEHHHHHHHHHHHHCCCHHHEECCCCCCHHHHCCCCCCCEEEEEECCCC
AGEAQAARIQEHYPEAKRLCPHGAKIGMNICRKSRNGKYSLSGNGKWIWNAECPYSLPSG
CCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCCCC
SCGISASTRPISSAAVMPNASEINTKDASEG
CCCCCCCCCCCCCCEECCCCHHCCCCCCCCC
>Mature Secondary Structure 
PAYAVLRIQKLKSWGDIAGSDAHNYRERETPNADAERTPDNSTFAGNPEQDSVAAIKAA
CCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
IGNQNIRKNAVLAVEMLLSASPEHFRPDDKSKAGSYDLSRAWEWAETSAQWLRERYGNRV
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IKAVMHLDEATPHMHATIVPLDDKGKLNCRALFGGTRHTLTDLQTDYAKAVEKLGIERGL
HHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
QGSWAKHQDVAKFYAITQNQEHPAVPRAKGVDIPPLPGRVERLSDSVLTRFAQEVAASAI
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DAQQDKTVPALQMLTGENAMLKKQTEDLRRSNAALSQERDRLKREADQLRGWPLPEVLTQ
HHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LYGAREASDSKASYKSRKFELPDGTKIGVTDDLWHDNTNNVGKKGAINLVMHLSGYGQEQ
HHCCCCCCCCHHHHHHCEEECCCCCEECCCHHCCCCCCCCCCCCCCEEEEEEECCCCHHH
YKQAVRDLADAFGSDAANRAVSRHIINTAPKQAERITLESIKEPAQLPQPCPETWQRVRG
HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCHHHHHHHHH
YLTKERKLPGKLIDAVHCQGLVYSDQRTNCVFPCDKESGAFLRGSGKQPFKRTMGQGHLP
HHHHHHCCCHHHHHHHHHCCEEECCCCCCEEECCCCCCCCEEECCCCCHHHHHCCCCCCC
FHLKGEDSKVMVAESAIDALSLKALYPASSVIATGGNMPPERLKPYLNGKEVYLAHDADK
EEEECCCCEEEEEHHHHHHHHHHHHCCCHHHEECCCCCCHHHHCCCCCCCEEEEEECCCC
AGEAQAARIQEHYPEAKRLCPHGAKIGMNICRKSRNGKYSLSGNGKWIWNAECPYSLPSG
CCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCCCC
SCGISASTRPISSAAVMPNASEINTKDASEG
CCCCCCCCCCCCCCEECCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA