| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903711
Identifier: 220903711
GI number: 220903711
Start: 525082
End: 525729
Strand: Direct
Name: 220903711
Synonym: Ddes_0433
Alternate gene names: NA
Gene position: 525082-525729 (Clockwise)
Preceding gene: 220903710
Following gene: 220903713
Centisome position: 18.27
GC content: 52.62
Gene sequence:
>648_bases ATGCCACGAGAGAGGCAGGTTTCCGGTGATTCTTCTTGTAAGTCACCGGATATTGATTCCGGGCTGATTGGTAAAAAGTT TGAGGTCTGCCTGCACAGCATTCTGACACTCGGAAGTATCCTTCAATTCACCGGGATTATTGCGGCATTCTTTCAGCTTG GCTTCAAGAGCCGCCTTATTTTCCGGGGCCATATACCAATCAACGGTGTGGGGTTTGCTGTCTTTGCCTTGCTGCCCTTC GGCAAATGCAGCGGGAGCACCCATAAGGGCAAAGACAAACAGAGAAAGCATAACGAGTCTGACGGAACGCACTTCGACCT CCTTTCGAGAGAAGTTTACGCGAGAGAACTTTCCGCAGACCACTACAAGGTTCTATACTATCTTGTCAAGATGCGTGATG TATCTGCCATTCCCGCCATTTTCGGCCCTCTGCTACGCACATTGCGCGTAGAGGCAGGGCTGTCTCAGGAACAGCTTGCG GCGCAATGCGGCATGGATCGTTCCGCCATTTCGCTTTTGGAGCGGCAGAAAAATCAGCCTTCGCTGGCGTCCTTGGTATT GATTTCAGAGGCGTTGGGCATGACGGCGGCGGAACTGATCGGACGGGTTGAGGCCGATATTCCGCAACTGCCGGAAGGGA GCGAGTAA
Upstream 100 bases:
>100_bases TTTATCATTGAATTTTAGCCAATTATGCAAAATTTTTGAGGTAAGAGGGGTAAGGGGCAGATAAAGCCTTTTGCCTGTAG GAAAGAGAAGAATCACCGGG
Downstream 100 bases:
>100_bases GGGCATTCAGCGTTCCATATCCACTTGCCGTTGCCGCTCAGGCTGTATTTCCCGTTCCTGCTTTTTCTGCAAATATTCAT TCCAATCTTTGCCCCGTGGG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPRERQVSGDSSCKSPDIDSGLIGKKFEVCLHSILTLGSILQFTGIIAAFFQLGFKSRLIFRGHIPINGVGFAVFALLPF GKCSGSTHKGKDKQRKHNESDGTHFDLLSREVYARELSADHYKVLYYLVKMRDVSAIPAIFGPLLRTLRVEAGLSQEQLA AQCGMDRSAISLLERQKNQPSLASLVLISEALGMTAAELIGRVEADIPQLPEGSE
Sequences:
>Translated_215_residues MPRERQVSGDSSCKSPDIDSGLIGKKFEVCLHSILTLGSILQFTGIIAAFFQLGFKSRLIFRGHIPINGVGFAVFALLPF GKCSGSTHKGKDKQRKHNESDGTHFDLLSREVYARELSADHYKVLYYLVKMRDVSAIPAIFGPLLRTLRVEAGLSQEQLA AQCGMDRSAISLLERQKNQPSLASLVLISEALGMTAAELIGRVEADIPQLPEGSE >Mature_214_residues PRERQVSGDSSCKSPDIDSGLIGKKFEVCLHSILTLGSILQFTGIIAAFFQLGFKSRLIFRGHIPINGVGFAVFALLPFG KCSGSTHKGKDKQRKHNESDGTHFDLLSREVYARELSADHYKVLYYLVKMRDVSAIPAIFGPLLRTLRVEAGLSQEQLAA QCGMDRSAISLLERQKNQPSLASLVLISEALGMTAAELIGRVEADIPQLPEGSE
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23516; Mature: 23385
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRERQVSGDSSCKSPDIDSGLIGKKFEVCLHSILTLGSILQFTGIIAAFFQLGFKSRLI CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCEE FRGHIPINGVGFAVFALLPFGKCSGSTHKGKDKQRKHNESDGTHFDLLSREVYARELSAD EECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCC HYKVLYYLVKMRDVSAIPAIFGPLLRTLRVEAGLSQEQLAAQCGMDRSAISLLERQKNQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCC SLASLVLISEALGMTAAELIGRVEADIPQLPEGSE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PRERQVSGDSSCKSPDIDSGLIGKKFEVCLHSILTLGSILQFTGIIAAFFQLGFKSRLI CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCEE FRGHIPINGVGFAVFALLPFGKCSGSTHKGKDKQRKHNESDGTHFDLLSREVYARELSAD EECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCC HYKVLYYLVKMRDVSAIPAIFGPLLRTLRVEAGLSQEQLAAQCGMDRSAISLLERQKNQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCC SLASLVLISEALGMTAAELIGRVEADIPQLPEGSE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA