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The map label for this gene is ycdQ [C]

Identifier: 220903677

GI number: 220903677

Start: 485030

End: 486088

Strand: Reverse

Name: ycdQ [C]

Synonym: Ddes_0398

Alternate gene names: 220903677

Gene position: 486088-485030 (Counterclockwise)

Preceding gene: 220903678

Following gene: 220903676

Centisome position: 16.92

GC content: 50.99

Gene sequence:

>1059_bases
ATGAACATACAAAACACCAGTCACACGCCATCCATCACTGTTCTGTTGCCTGTATTTAATGGCGAGCAGTTTATAAAAGA
GGCGGTAACATCAATACTGGCCCAGTCTTTTACCAATTTCGACCTGCTGATTATCAATGACGGCTCCACTGATGGCACGG
GCGAAATCTTGCAGCGACTGGCTGCCAAGGATCCCCGCATCCGTATCCATCAGCGTGAAAATCGGGGGCTTATCGCCACG
TTGAATGAAGGGATTGCCCTTTGCTCCTCTGAATTTGTGGCACGGATGGATGCAGATGATTGCGCTTTGCCGCATCGCCT
TGCCGTTCAATACGACTATATGACGAAGCATGCAGAAACAGCCGTCTGTAGCACTGGCATGGAGGAATACGAAACCGGGC
GTACTCTCACCTGGGAGGGATACGGCGAAGCCGTACGCGCACGGCTGTTGTTCGGCTGCTGCCTTTACCACCCAACAATT
TTGGCTCGTCGGTCTGCGTTGCTGGCTGTTGGCGGCTACGATGCGGCAATGCCTTGTGCGGAGGACTACGACCTGTGGAT
GCGCTTGACAGAAGCCGGGTATTCTCTTGCCGTCTTGCCCCAGGTTCTCTTGCGCTATCGAGTTCATCCGCATTTATCTC
GGGCTGCATACAAATGGCAGATGGGCGAAACGACAGCACACATTCAGCAACGCCAGCTTTCATTACTAGGGATTGCACCC
ACGCCACGCCAGATGGACCGCCACCAGTTTTGCATATCGCATTGCCCTGAGATTTCTAAAAAACTGAAGGAAGCCGAAGC
ATGGTTGCAACATCTTGTTCAAGCCAATAACCGCGCCGGACTGTACAACAGAGAAATTTTTTTGCAGACAGTCAATGAAA
TCAAGAGTGATTTTGTACGCGCATCATGGCAACGCGACCCTGGTCAGTTTGTACGACGTGTATTGCGTACTTTTGTTAAA
GACTACATTTACCGGTTACGGCTCGGGGCAACGTTTGAAAAACGCATTGTCAATGTGGCCCGCCAGTTGGGCTTCTTTTC
TCAAAACCGCAAAGTTTGA

Upstream 100 bases:

>100_bases
AACGCTGTGAAAGTCATGCGGCCTTACATAATATTTGCGTCTCACCCCAAATATATTCGTTGATGCAGCTCCCCAAGGCA
CAGCTTCGAATACGGTTACA

Downstream 100 bases:

>100_bases
TGTCCATCACTTTTTAACTGCGCCCAGAGGCTGCTCACTTGTAAAACAATGAACATTATCATTGACGGCCACGCACTGGG
CACCCTTGGCGGCATAGAGC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MNIQNTSHTPSITVLLPVFNGEQFIKEAVTSILAQSFTNFDLLIINDGSTDGTGEILQRLAAKDPRIRIHQRENRGLIAT
LNEGIALCSSEFVARMDADDCALPHRLAVQYDYMTKHAETAVCSTGMEEYETGRTLTWEGYGEAVRARLLFGCCLYHPTI
LARRSALLAVGGYDAAMPCAEDYDLWMRLTEAGYSLAVLPQVLLRYRVHPHLSRAAYKWQMGETTAHIQQRQLSLLGIAP
TPRQMDRHQFCISHCPEISKKLKEAEAWLQHLVQANNRAGLYNREIFLQTVNEIKSDFVRASWQRDPGQFVRRVLRTFVK
DYIYRLRLGATFEKRIVNVARQLGFFSQNRKV

Sequences:

>Translated_352_residues
MNIQNTSHTPSITVLLPVFNGEQFIKEAVTSILAQSFTNFDLLIINDGSTDGTGEILQRLAAKDPRIRIHQRENRGLIAT
LNEGIALCSSEFVARMDADDCALPHRLAVQYDYMTKHAETAVCSTGMEEYETGRTLTWEGYGEAVRARLLFGCCLYHPTI
LARRSALLAVGGYDAAMPCAEDYDLWMRLTEAGYSLAVLPQVLLRYRVHPHLSRAAYKWQMGETTAHIQQRQLSLLGIAP
TPRQMDRHQFCISHCPEISKKLKEAEAWLQHLVQANNRAGLYNREIFLQTVNEIKSDFVRASWQRDPGQFVRRVLRTFVK
DYIYRLRLGATFEKRIVNVARQLGFFSQNRKV
>Mature_352_residues
MNIQNTSHTPSITVLLPVFNGEQFIKEAVTSILAQSFTNFDLLIINDGSTDGTGEILQRLAAKDPRIRIHQRENRGLIAT
LNEGIALCSSEFVARMDADDCALPHRLAVQYDYMTKHAETAVCSTGMEEYETGRTLTWEGYGEAVRARLLFGCCLYHPTI
LARRSALLAVGGYDAAMPCAEDYDLWMRLTEAGYSLAVLPQVLLRYRVHPHLSRAAYKWQMGETTAHIQQRQLSLLGIAP
TPRQMDRHQFCISHCPEISKKLKEAEAWLQHLVQANNRAGLYNREIFLQTVNEIKSDFVRASWQRDPGQFVRRVLRTFVK
DYIYRLRLGATFEKRIVNVARQLGFFSQNRKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=222, Percent_Identity=30.6306306306306, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788372, Length=197, Percent_Identity=28.9340101522843, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790044, Length=96, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 40153; Mature: 40153

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQNTSHTPSITVLLPVFNGEQFIKEAVTSILAQSFTNFDLLIINDGSTDGTGEILQRL
CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
AAKDPRIRIHQRENRGLIATLNEGIALCSSEFVARMDADDCALPHRLAVQYDYMTKHAET
HCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHEEEHHHHHHHHH
AVCSTGMEEYETGRTLTWEGYGEAVRARLLFGCCLYHPTILARRSALLAVGGYDAAMPCA
HHHHCCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
EDYDLWMRLTEAGYSLAVLPQVLLRYRVHPHLSRAAYKWQMGETTAHIQQRQLSLLGIAP
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHEEECCCHHHHHHHHHHHHEECCC
TPRQMDRHQFCISHCPEISKKLKEAEAWLQHLVQANNRAGLYNREIFLQTVNEIKSDFVR
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
ASWQRDPGQFVRRVLRTFVKDYIYRLRLGATFEKRIVNVARQLGFFSQNRKV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNIQNTSHTPSITVLLPVFNGEQFIKEAVTSILAQSFTNFDLLIINDGSTDGTGEILQRL
CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
AAKDPRIRIHQRENRGLIATLNEGIALCSSEFVARMDADDCALPHRLAVQYDYMTKHAET
HCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHEEEHHHHHHHHH
AVCSTGMEEYETGRTLTWEGYGEAVRARLLFGCCLYHPTILARRSALLAVGGYDAAMPCA
HHHHCCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
EDYDLWMRLTEAGYSLAVLPQVLLRYRVHPHLSRAAYKWQMGETTAHIQQRQLSLLGIAP
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHEEECCCHHHHHHHHHHHHEECCC
TPRQMDRHQFCISHCPEISKKLKEAEAWLQHLVQANNRAGLYNREIFLQTVNEIKSDFVR
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
ASWQRDPGQFVRRVLRTFVKDYIYRLRLGATFEKRIVNVARQLGFFSQNRKV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]