Click here to switch to the map view.

The map label for this gene is 220903674

Identifier: 220903674

GI number: 220903674

Start: 481291

End: 481866

Strand: Reverse

Name: 220903674

Synonym: Ddes_0395

Alternate gene names: NA

Gene position: 481866-481291 (Counterclockwise)

Preceding gene: 220903676

Following gene: 220903663

Centisome position: 16.77

GC content: 54.86

Gene sequence:

>576_bases
GTGAACAGCCATAAGGATGCCAAACTGACGGTTCGTAGTCGAGAAGAAATGGTGAGGCGAATGCAATATGAACCGGCGGC
CAGAGTGGCCGCTGGATATGGCGTGAGCCTGCGCACCGCCAGAAAGTGGGAACGCCGCCATGCTCATGGCGGACAAGAGG
CGCTTGCAGGCCGTAGTTCACGGCCCAGGCGTTGCTGCAACAAACTGTCAGAGCAGGATTTTTGTCGAATATTTGAGTTG
CGAAAAACGCGAAAAACCGGAGATGAGATAGCCCTGTGCTTGGGTATCTGTCGCAGCAGCGTGTTTCGGACCTTACACAA
GCTCGGTTGTTCCCGGTTGGCTTCCCTGGAAAAAAAGGATCCTGTCCAGCGCTACCAGTGGGAAAATCCTGGGCAAATGC
TGCATTGGACATTAAGAAGTTGGGCAAGATTGATGGCGTTGGTCATTGCAAAGTCGGCTTGGGCAATGCCCGCCGTAGGC
GGCCAGGATGGGAATATCTGCACGCTTGTGTTGATGATGCCTCAAGGGTCGCGTACACCGCCATTCTCCCGGACGAAACA
GCGGAATCCGCAGTAG

Upstream 100 bases:

>100_bases
TTTGTTTCGCGCTAGATGTAGTGTTCCAATAGGTTGTTCACCCTCCCAAAATCGGTAAAGCTGGAGTTACCAGACAACAG
CAAACCGAGTGAGGGAAAGG

Downstream 100 bases:

>100_bases
AGTTTTTGTGGTTTGCCGTTGCCTGGTACGCCTCGCACGGCATCAAGGTAGAACGAATTTTGACGGATAACGGATCGTGC
TACAGGTCGTGGAAGTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Integrase Catalytic Region; ISAca1 Transposase; Insertion Sequence Transposase Protein; ISBm3 Transposase Programmed Frameshift

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNSHKDAKLTVRSREEMVRRMQYEPAARVAAGYGVSLRTARKWERRHAHGGQEALAGRSSRPRRCCNKLSEQDFCRIFEL
RKTRKTGDEIALCLGICRSSVFRTLHKLGCSRLASLEKKDPVQRYQWENPGQMLHWTLRSWARLMALVIAKSAWAMPAVG
GQDGNICTLVLMMPQGSRTPPFSRTKQRNPQ

Sequences:

>Translated_191_residues
MNSHKDAKLTVRSREEMVRRMQYEPAARVAAGYGVSLRTARKWERRHAHGGQEALAGRSSRPRRCCNKLSEQDFCRIFEL
RKTRKTGDEIALCLGICRSSVFRTLHKLGCSRLASLEKKDPVQRYQWENPGQMLHWTLRSWARLMALVIAKSAWAMPAVG
GQDGNICTLVLMMPQGSRTPPFSRTKQRNPQ
>Mature_191_residues
MNSHKDAKLTVRSREEMVRRMQYEPAARVAAGYGVSLRTARKWERRHAHGGQEALAGRSSRPRRCCNKLSEQDFCRIFEL
RKTRKTGDEIALCLGICRSSVFRTLHKLGCSRLASLEKKDPVQRYQWENPGQMLHWTLRSWARLMALVIAKSAWAMPAVG
GQDGNICTLVLMMPQGSRTPPFSRTKQRNPQ

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21853; Mature: 21853

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSHKDAKLTVRSREEMVRRMQYEPAARVAAGYGVSLRTARKWERRHAHGGQEALAGRSS
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCC
RPRRCCNKLSEQDFCRIFELRKTRKTGDEIALCLGICRSSVFRTLHKLGCSRLASLEKKD
CHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVQRYQWENPGQMLHWTLRSWARLMALVIAKSAWAMPAVGGQDGNICTLVLMMPQGSRTP
CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCC
PFSRTKQRNPQ
CCCCCCCCCCC
>Mature Secondary Structure
MNSHKDAKLTVRSREEMVRRMQYEPAARVAAGYGVSLRTARKWERRHAHGGQEALAGRSS
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCC
RPRRCCNKLSEQDFCRIFELRKTRKTGDEIALCLGICRSSVFRTLHKLGCSRLASLEKKD
CHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVQRYQWENPGQMLHWTLRSWARLMALVIAKSAWAMPAVGGQDGNICTLVLMMPQGSRTP
CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCC
PFSRTKQRNPQ
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA