| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is flgG [H]
Identifier: 220903670
GI number: 220903670
Start: 476288
End: 477085
Strand: Direct
Name: flgG [H]
Synonym: Ddes_0391
Alternate gene names: 220903670
Gene position: 476288-477085 (Clockwise)
Preceding gene: 220903669
Following gene: 220903671
Centisome position: 16.58
GC content: 56.27
Gene sequence:
>798_bases ATGCAAGCCGGCATGTTTAGCGGACTTTTTGCCGCACTCACCACAGAACATCGCATGAACTTCATCGCCAATAATTTGGC GAATGCCAATACGCGCGGCTATAAACGCGACACCGTGGCCTTTAAGGACACCATGGTAACCTACGCCTTTGACGAGATTC GCGAACCGCTCATGAATCTCAAGTCCAAGCCGCTTTTTCCCGAACCGCTGAACGCCTCGCGGGTGCGTCTTGCCGTATCC AAGATAGATTTTGCCCAGGGGTCCATGCAGTACTCGGGCAATCCGCTGGACATGGCCATCAACGGTGAAAATGCCTTTTT TCGCGTAGCCACGCCCACCGGAGATTTTCTTACGCGCAACGGGGCCTTCGTGTTGTCGGAAAACGGCACCATAATGACCC CGCAGGGCTATCCCCTGCAGGCTCAGGGCGGCGGCAATATTGTTATTCCGCAGGGTACGCGCCACATCCAGGTAAGCGGC GATGGGCAGGTCATTGCCGATAATGACGTGCTGGGCCAGATCGCGCTGGTTAGCGTGGATAATCCGCAGAATCTCGAAAA AATGGGCAATAACCTTTACCGGCCGCGTGAAAATGTGCAGGTGGCCGAGGGCAACGCCTATCTGGAAGGCGGCCGCATCG AGCAGGGCTTTACCGAAGCCGCCAACGTGGAAGTAGTGCCGGAAATGGTGAACATGATCGAGGTGCAGCGCCAGTTTGAA GCCTATCAGAAGGTCATGCAGACCTCGGATACACTGGACCGCGCCGCCACAGAAAAAGTCGGACGGCGTCAGGGCTAG
Upstream 100 bases:
>100_bases TTGGCCCGCACTTTGCATAAATTCAGGCACGGGGCATCAGGCCCAAGGAGACGATGGCCGCGCATCCACATCAGCGCGCC CGCCAACCAAGGAGTATCAC
Downstream 100 bases:
>100_bases GCATTCTGCCCTTTAAAGAATTCCTGCCGGCGCGCTGAAGCGCCGCCTCTGGATACAAAACGGACCCGCTCCAGATCTGC CGCTGGAACAAGGAGAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MQAGMFSGLFAALTTEHRMNFIANNLANANTRGYKRDTVAFKDTMVTYAFDEIREPLMNLKSKPLFPEPLNASRVRLAVS KIDFAQGSMQYSGNPLDMAINGENAFFRVATPTGDFLTRNGAFVLSENGTIMTPQGYPLQAQGGGNIVIPQGTRHIQVSG DGQVIADNDVLGQIALVSVDNPQNLEKMGNNLYRPRENVQVAEGNAYLEGGRIEQGFTEAANVEVVPEMVNMIEVQRQFE AYQKVMQTSDTLDRAATEKVGRRQG
Sequences:
>Translated_265_residues MQAGMFSGLFAALTTEHRMNFIANNLANANTRGYKRDTVAFKDTMVTYAFDEIREPLMNLKSKPLFPEPLNASRVRLAVS KIDFAQGSMQYSGNPLDMAINGENAFFRVATPTGDFLTRNGAFVLSENGTIMTPQGYPLQAQGGGNIVIPQGTRHIQVSG DGQVIADNDVLGQIALVSVDNPQNLEKMGNNLYRPRENVQVAEGNAYLEGGRIEQGFTEAANVEVVPEMVNMIEVQRQFE AYQKVMQTSDTLDRAATEKVGRRQG >Mature_265_residues MQAGMFSGLFAALTTEHRMNFIANNLANANTRGYKRDTVAFKDTMVTYAFDEIREPLMNLKSKPLFPEPLNASRVRLAVS KIDFAQGSMQYSGNPLDMAINGENAFFRVATPTGDFLTRNGAFVLSENGTIMTPQGYPLQAQGGGNIVIPQGTRHIQVSG DGQVIADNDVLGQIALVSVDNPQNLEKMGNNLYRPRENVQVAEGNAYLEGGRIEQGFTEAANVEVVPEMVNMIEVQRQFE AYQKVMQTSDTLDRAATEKVGRRQG
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=268, Percent_Identity=32.4626865671642, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI1787317, Length=262, Percent_Identity=25.9541984732824, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 29116; Mature: 29116
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAGMFSGLFAALTTEHRMNFIANNLANANTRGYKRDTVAFKDTMVTYAFDEIREPLMNL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH KSKPLFPEPLNASRVRLAVSKIDFAQGSMQYSGNPLDMAINGENAFFRVATPTGDFLTRN CCCCCCCCCCCCCCEEEEEEHHHHCCCCEEECCCEEEEEECCCCEEEEEECCCCCCEECC GAFVLSENGTIMTPQGYPLQAQGGGNIVIPQGTRHIQVSGDGQVIADNDVLGQIALVSVD CCEEEECCCCEECCCCCEEEECCCCEEEECCCCEEEEECCCCCEEECCCCCCEEEEEEEC NPQNLEKMGNNLYRPRENVQVAEGNAYLEGGRIEQGFTEAANVEVVPEMVNMIEVQRQFE CCHHHHHHCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHH AYQKVMQTSDTLDRAATEKVGRRQG HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQAGMFSGLFAALTTEHRMNFIANNLANANTRGYKRDTVAFKDTMVTYAFDEIREPLMNL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH KSKPLFPEPLNASRVRLAVSKIDFAQGSMQYSGNPLDMAINGENAFFRVATPTGDFLTRN CCCCCCCCCCCCCCEEEEEEHHHHCCCCEEECCCEEEEEECCCCEEEEEECCCCCCEECC GAFVLSENGTIMTPQGYPLQAQGGGNIVIPQGTRHIQVSGDGQVIADNDVLGQIALVSVD CCEEEECCCCEECCCCCEEEECCCCEEEECCCCEEEEECCCCCEEECCCCCCEEEEEEEC NPQNLEKMGNNLYRPRENVQVAEGNAYLEGGRIEQGFTEAANVEVVPEMVNMIEVQRQFE CCHHHHHHCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHH AYQKVMQTSDTLDRAATEKVGRRQG HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1828465; 1905667; 9384377 [H]