| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is hisI [H]
Identifier: 220903641
GI number: 220903641
Start: 439200
End: 439613
Strand: Reverse
Name: hisI [H]
Synonym: Ddes_0361
Alternate gene names: 220903641
Gene position: 439613-439200 (Counterclockwise)
Preceding gene: 220903645
Following gene: 220903640
Centisome position: 15.3
GC content: 60.87
Gene sequence:
>414_bases ATGACAGCCCCCGAACCGCAGTCTTCCGCCGCCCCCGGCGAGGCTTTCACCCCCGATTTCAGCAAGGGCCTTCTGCCCGC CATCGCACAGGACCACGCCAGCGGCGAGGTGCTCATGCTGGCGTATATGAATGAAGAAGCCTGGCGTAAAACCCTTGAGA CCGGCCAGGCTCACTACTGGAGCCGCAGCCGAGAAAAGATCTGGCATAAAGGCGGCACTTCGGGGCATATACAAAAAGTG CTCGCTGTGCGGCTGGACTGCGACAGCGACACGGTACTGCTGTTTGTGGACCAGGTGGGCGGCGCGGCCTGTCATACGGG ACGGCGCACCTGCTTTTACCGGGAATGGAAGGATGGCGCCGTCAGCGAGTGCGCCCCGATGGTCTTTGATCCCCAAAAAG TTTACGGCGTATAA
Upstream 100 bases:
>100_bases CTTGCGTCCCATGCCTCTTACGAGTACGTTTATTTCCTTTGCCGCCCAACAACGCCCACGTAACGGGCCGCTCAGGGCGC AGCCTTTTCAAGGAGTGACC
Downstream 100 bases:
>100_bases AGGAAAGAATCATGAGCGCGGACATAAAACCCATCATCAAGCTCGGCGTGCCCAAAGGCTCGCTGGAAGAAGCCACCATC AATCTTTTCGAACGTGCGGG
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH [H]
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MTAPEPQSSAAPGEAFTPDFSKGLLPAIAQDHASGEVLMLAYMNEEAWRKTLETGQAHYWSRSREKIWHKGGTSGHIQKV LAVRLDCDSDTVLLFVDQVGGAACHTGRRTCFYREWKDGAVSECAPMVFDPQKVYGV
Sequences:
>Translated_137_residues MTAPEPQSSAAPGEAFTPDFSKGLLPAIAQDHASGEVLMLAYMNEEAWRKTLETGQAHYWSRSREKIWHKGGTSGHIQKV LAVRLDCDSDTVLLFVDQVGGAACHTGRRTCFYREWKDGAVSECAPMVFDPQKVYGV >Mature_136_residues TAPEPQSSAAPGEAFTPDFSKGLLPAIAQDHASGEVLMLAYMNEEAWRKTLETGQAHYWSRSREKIWHKGGTSGHIQKVL AVRLDCDSDTVLLFVDQVGGAACHTGRRTCFYREWKDGAVSECAPMVFDPQKVYGV
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=92, Percent_Identity=46.7391304347826, Blast_Score=98, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319819, Length=109, Percent_Identity=38.5321100917431, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH [H]
EC number: =3.5.4.19 [H]
Molecular weight: Translated: 15103; Mature: 14972
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPEPQSSAAPGEAFTPDFSKGLLPAIAQDHASGEVLMLAYMNEEAWRKTLETGQAHYW CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCHHH SRSREKIWHKGGTSGHIQKVLAVRLDCDSDTVLLFVDQVGGAACHTGRRTCFYREWKDGA HHHHHHHHHCCCCCHHHHEEHHEEECCCCCEEEEEEECCCCCEECCCCCCEEEECCCCCC VSECAPMVFDPQKVYGV HHHCCCCEECHHHHCCC >Mature Secondary Structure TAPEPQSSAAPGEAFTPDFSKGLLPAIAQDHASGEVLMLAYMNEEAWRKTLETGQAHYW CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCHHH SRSREKIWHKGGTSGHIQKVLAVRLDCDSDTVLLFVDQVGGAACHTGRRTCFYREWKDGA HHHHHHHHHCCCCCHHHHEEHHEEECCCCCEEEEEEECCCCCEECCCCCCEEEECCCCCC VSECAPMVFDPQKVYGV HHHCCCCEECHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA