| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903613
Identifier: 220903613
GI number: 220903613
Start: 405372
End: 406598
Strand: Direct
Name: 220903613
Synonym: Ddes_0333
Alternate gene names: NA
Gene position: 405372-406598 (Clockwise)
Preceding gene: 220903610
Following gene: 220903619
Centisome position: 14.11
GC content: 62.1
Gene sequence:
>1227_bases ATGTTTTACGGCTGGAAGATAAGCCTGCTTTCCATGGGCGGCAATTTCATGCTTCAGGGTACGGTGCTCTACTGCATGAA TGCATTCATGGAGCCGCTATGCGTCGCGTATGGCTGGACACGGGCGGAACTGAATATCAGCATGGCCGTGGCCGCCCTGG TGGGGCAGCTGGCCATGCCTGTGGCGGCTTCGCTTTCCGCCCGCTTTGCCCTGCGCCGCCTCATGACGGCCGGGGCGCTG GTGGGCGGCGTTGCCACCATTTTGCAGGGCATGACGGGTAATCTTGCGCTCTTTACCCTGCTGTTTACCATTGCCTGGAG CGCCACCCAGATATGCGGCGGCGTTGTGGGCAACGCGCTTGTGAGCAACTGGTTTTACTATTTCCGCGGCCGGGCTTTCG GCCTTGTCAACGCAGGCACGTCGCTTTCGGGCGTGGTGCTGCCGCTGGCAAGCATGGCCCTTATCAATGCTTTTGACGTG AGCACGGCCTATCTTGTGCTGGGGCTGCTCACCTGCGGGCTTGCCCCCCTGTCGTGGTTTCTGGTGCGCGACACGCCGCA GGCCATGCACATGCACCCTGACGGCAGAAAGCACGAACCCCCGGCCGGGCGCTGCCGGATTGCGCCGGACACGTCCTTCA GGGGGCTGATGCATTCGCCCTATGCCTATTGCATGGGCATCGCCTTTGGCCTGGCCCTTATGGTCAGCTCTTCCGTCATG AGCCAGATGAAGCCGCGTTTTGTGGACCTGGGGCTGGCGCCGTATACGTCCATGCTGCTGGCCTGTGCGGCGGCCCTGTG CGCGGCCCTGGGCAAGTATGCGTGGGGCTGGGCCTGCGACCGCTTCACGCCGCTGGCGGCTGCGCACGTCATCATGCTGG CTTGCGCCCTGAGCCTGTGCCTGGGCTTTCTGCCGCCCACGGTGTGGGGCATGACCATCTTCAGCCTCAGCTTCGGCCTG TGTGTCGGCGGCCTGTGGACTGTGCTGCCCGCCGTTGTTTCCTACTACTACGGCAGCGGCAACTTCTTGCCGTCCTACAA GTTCGTGTCGGTTTTCATTGTCCTGCGCTGTCTGGGATATCCCATCATGGGCTATTCTTACGACCTTACCGGAGGCTACC GTGCGGCAGATGTGGTTTTTGTGGTCATGCTGCTGCTTTCTCTGGCCCTGAGCATGTGCCTGCGCGAAGATGACGCCGTG GAAGGCGGCGGAAAACGGCATAACTAG
Upstream 100 bases:
>100_bases CCGGCTGCGGGACTGCCCGCTGCCGGGGTGTTTTTTGGCCGTTTGGCGGGCCGCTGCCCTGCGATGTTTTTTTGGTGCGG CAACTACTTCAGAGGATGAC
Downstream 100 bases:
>100_bases CGCATTTCACCTTGAAAAAGGTCTGTTCCACTTCCACATGCTTATACCGTTTGCGCGCTGTCTGGCAGCCAAAGAGCCGG ACGGCCTTTCCTGCCCCTTC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Transporter
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MFYGWKISLLSMGGNFMLQGTVLYCMNAFMEPLCVAYGWTRAELNISMAVAALVGQLAMPVAASLSARFALRRLMTAGAL VGGVATILQGMTGNLALFTLLFTIAWSATQICGGVVGNALVSNWFYYFRGRAFGLVNAGTSLSGVVLPLASMALINAFDV STAYLVLGLLTCGLAPLSWFLVRDTPQAMHMHPDGRKHEPPAGRCRIAPDTSFRGLMHSPYAYCMGIAFGLALMVSSSVM SQMKPRFVDLGLAPYTSMLLACAAALCAALGKYAWGWACDRFTPLAAAHVIMLACALSLCLGFLPPTVWGMTIFSLSFGL CVGGLWTVLPAVVSYYYGSGNFLPSYKFVSVFIVLRCLGYPIMGYSYDLTGGYRAADVVFVVMLLLSLALSMCLREDDAV EGGGKRHN
Sequences:
>Translated_408_residues MFYGWKISLLSMGGNFMLQGTVLYCMNAFMEPLCVAYGWTRAELNISMAVAALVGQLAMPVAASLSARFALRRLMTAGAL VGGVATILQGMTGNLALFTLLFTIAWSATQICGGVVGNALVSNWFYYFRGRAFGLVNAGTSLSGVVLPLASMALINAFDV STAYLVLGLLTCGLAPLSWFLVRDTPQAMHMHPDGRKHEPPAGRCRIAPDTSFRGLMHSPYAYCMGIAFGLALMVSSSVM SQMKPRFVDLGLAPYTSMLLACAAALCAALGKYAWGWACDRFTPLAAAHVIMLACALSLCLGFLPPTVWGMTIFSLSFGL CVGGLWTVLPAVVSYYYGSGNFLPSYKFVSVFIVLRCLGYPIMGYSYDLTGGYRAADVVFVVMLLLSLALSMCLREDDAV EGGGKRHN >Mature_408_residues MFYGWKISLLSMGGNFMLQGTVLYCMNAFMEPLCVAYGWTRAELNISMAVAALVGQLAMPVAASLSARFALRRLMTAGAL VGGVATILQGMTGNLALFTLLFTIAWSATQICGGVVGNALVSNWFYYFRGRAFGLVNAGTSLSGVVLPLASMALINAFDV STAYLVLGLLTCGLAPLSWFLVRDTPQAMHMHPDGRKHEPPAGRCRIAPDTSFRGLMHSPYAYCMGIAFGLALMVSSSVM SQMKPRFVDLGLAPYTSMLLACAAALCAALGKYAWGWACDRFTPLAAAHVIMLACALSLCLGFLPPTVWGMTIFSLSFGL CVGGLWTVLPAVVSYYYGSGNFLPSYKFVSVFIVLRCLGYPIMGYSYDLTGGYRAADVVFVVMLLLSLALSMCLREDDAV EGGGKRHN
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43734; Mature: 43734
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYGWKISLLSMGGNFMLQGTVLYCMNAFMEPLCVAYGWTRAELNISMAVAALVGQLAMP CCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VAASLSARFALRRLMTAGALVGGVATILQGMTGNLALFTLLFTIAWSATQICGGVVGNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSNWFYYFRGRAFGLVNAGTSLSGVVLPLASMALINAFDVSTAYLVLGLLTCGLAPLSWF HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVRDTPQAMHMHPDGRKHEPPAGRCRIAPDTSFRGLMHSPYAYCMGIAFGLALMVSSSVM HEECCCHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH SQMKPRFVDLGLAPYTSMLLACAAALCAALGKYAWGWACDRFTPLAAAHVIMLACALSLC HHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHH LGFLPPTVWGMTIFSLSFGLCVGGLWTVLPAVVSYYYGSGNFLPSYKFVSVFIVLRCLGY HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC PIMGYSYDLTGGYRAADVVFVVMLLLSLALSMCLREDDAVEGGGKRHN CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MFYGWKISLLSMGGNFMLQGTVLYCMNAFMEPLCVAYGWTRAELNISMAVAALVGQLAMP CCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VAASLSARFALRRLMTAGALVGGVATILQGMTGNLALFTLLFTIAWSATQICGGVVGNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSNWFYYFRGRAFGLVNAGTSLSGVVLPLASMALINAFDVSTAYLVLGLLTCGLAPLSWF HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVRDTPQAMHMHPDGRKHEPPAGRCRIAPDTSFRGLMHSPYAYCMGIAFGLALMVSSSVM HEECCCHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH SQMKPRFVDLGLAPYTSMLLACAAALCAALGKYAWGWACDRFTPLAAAHVIMLACALSLC HHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHH LGFLPPTVWGMTIFSLSFGLCVGGLWTVLPAVVSYYYGSGNFLPSYKFVSVFIVLRCLGY HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC PIMGYSYDLTGGYRAADVVFVVMLLLSLALSMCLREDDAVEGGGKRHN CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA