| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903608
Identifier: 220903608
GI number: 220903608
Start: 398723
End: 399766
Strand: Reverse
Name: 220903608
Synonym: Ddes_0327
Alternate gene names: NA
Gene position: 399766-398723 (Counterclockwise)
Preceding gene: 220903611
Following gene: 220903607
Centisome position: 13.91
GC content: 62.74
Gene sequence:
>1044_bases ATGCAGGTAAAGACGTTCACCGGCGCCACATCGCAGGAGATTCTGGCAAGAATCAAGGCCGAAATGGGGCCAGATGCCGT CATCCTGGGCAACCGTACCTATCGCAAAAACGGCGCGGTCTGCCACGAAATCACGGCGGGGATGGAACGCCCCCAGTCCG CTAACGGCGCGTCCGGCGGCGCTCCGGGCGGGTGGGGCGAATGGCACAAGGAGTGGCAGCAGATCAAGGATCAGCTCTTT GCCCTTATGAAGCCCGCCATCCAGCTTGAGCGCCTGACCCCCCGTCAGCGCGTTGCCCTTGAGTATCTTCAGCGTGAGGG AATTTCCGACGCTGTAGCCGTGGACCTGTACCAGCGTCTGGTGTCACAGCCCGGCGCATCAGTGCTGGAATGCCTGTGCG GCATGGTTCCGGTCAAAGGATGGGGACCGGCGTACTGGGATCAGCGGCTGCACCTGATGGCGGGGCCGTTCGGCTTCGGC AAAACCACTACTGCCCTGCGCTTTGCCCTGCACCGCCGCAAGGCTGAGCCTGAGGCGCGCGTAGCCTTTATCAATGCCGA CTGCCTGCGCGGCAACGGCCGCCTGGTGCTGCGGCACTGGGCCGAACTTTCAAACTTCAGCTATCTCGAAGCCCCGGACA GGGCAGCCATGCAGGAAGCGCTGAAGGCCACGGCCGACGCCGATGCCGTGTTCATCGACGTTCCCGGGCTTGACCGCACC ACAAGCCTCGCGCAATGGCGCGAAGAAATGGGGCTGGCACAGGTGGACGCCGCCACGCATCTGACGCTTTCACCCTATTG CGATGCCGTGCAGATTCAGGCATTTCTGCACCGCTACAAATGCGACGGCCCGGGGTCCCTGGTATGGACAAAGCTGGACG AAGCCGTGAGCTTTGGTACTATAGTCAACGTGGCCTGCGCCGCCGGTTTGCCCATATCGGCACTGTCTTACGGCGCGGAA CTCAAGGAGAGCCTTGCCCCGGCCACGGAGCCGCTGGTGTGGCGACTGATTTTCAAAAGGCAAATCCCCGGCCAGGCGGC TTAA
Upstream 100 bases:
>100_bases CCAGCTTGGCCCCTAATTTGCATTTAGTCAGTGTGCTGTCAAACATACGGCACAACGGCAATAACGGGCGGCGCAACCGC CGTCAGTCAAAGGAAAGGCC
Downstream 100 bases:
>100_bases GCACGGCCTAAACTATGCGGAGCACACAGATGAGCGGCACATTCCCCCTGGTATTTTCCGTCACTTCCGGCAAGGGCGGG GTAGGCAAGACCAATATCTC
Product: GTP-binding signal recognition particle SRP54 G- domain-containing protein
Products: NA
Alternate protein names: Flagellar Biosynthetic Protein FlhF; Flagellar Biosynthesis Regulator FlhF
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MQVKTFTGATSQEILARIKAEMGPDAVILGNRTYRKNGAVCHEITAGMERPQSANGASGGAPGGWGEWHKEWQQIKDQLF ALMKPAIQLERLTPRQRVALEYLQREGISDAVAVDLYQRLVSQPGASVLECLCGMVPVKGWGPAYWDQRLHLMAGPFGFG KTTTALRFALHRRKAEPEARVAFINADCLRGNGRLVLRHWAELSNFSYLEAPDRAAMQEALKATADADAVFIDVPGLDRT TSLAQWREEMGLAQVDAATHLTLSPYCDAVQIQAFLHRYKCDGPGSLVWTKLDEAVSFGTIVNVACAAGLPISALSYGAE LKESLAPATEPLVWRLIFKRQIPGQAA
Sequences:
>Translated_347_residues MQVKTFTGATSQEILARIKAEMGPDAVILGNRTYRKNGAVCHEITAGMERPQSANGASGGAPGGWGEWHKEWQQIKDQLF ALMKPAIQLERLTPRQRVALEYLQREGISDAVAVDLYQRLVSQPGASVLECLCGMVPVKGWGPAYWDQRLHLMAGPFGFG KTTTALRFALHRRKAEPEARVAFINADCLRGNGRLVLRHWAELSNFSYLEAPDRAAMQEALKATADADAVFIDVPGLDRT TSLAQWREEMGLAQVDAATHLTLSPYCDAVQIQAFLHRYKCDGPGSLVWTKLDEAVSFGTIVNVACAAGLPISALSYGAE LKESLAPATEPLVWRLIFKRQIPGQAA >Mature_347_residues MQVKTFTGATSQEILARIKAEMGPDAVILGNRTYRKNGAVCHEITAGMERPQSANGASGGAPGGWGEWHKEWQQIKDQLF ALMKPAIQLERLTPRQRVALEYLQREGISDAVAVDLYQRLVSQPGASVLECLCGMVPVKGWGPAYWDQRLHLMAGPFGFG KTTTALRFALHRRKAEPEARVAFINADCLRGNGRLVLRHWAELSNFSYLEAPDRAAMQEALKATADADAVFIDVPGLDRT TSLAQWREEMGLAQVDAATHLTLSPYCDAVQIQAFLHRYKCDGPGSLVWTKLDEAVSFGTIVNVACAAGLPISALSYGAE LKESLAPATEPLVWRLIFKRQIPGQAA
Specific function: Unknown
COG id: COG1419
COG function: function code N; Flagellar GTP-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37987; Mature: 37987
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVKTFTGATSQEILARIKAEMGPDAVILGNRTYRKNGAVCHEITAGMERPQSANGASGG CCEEECCCCCHHHHHHHHHHHCCCCEEEECCCEECCCCCHHHHHHHHHCCCCCCCCCCCC APGGWGEWHKEWQQIKDQLFALMKPAIQLERLTPRQRVALEYLQREGISDAVAVDLYQRL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH VSQPGASVLECLCGMVPVKGWGPAYWDQRLHLMAGPFGFGKTTTALRFALHRRKAEPEAR HCCCCHHHHHHHHCCCCCCCCCCHHHHCCHHEEECCCCCCHHHHHHHHHHHHHCCCCCCE VAFINADCLRGNGRLVLRHWAELSNFSYLEAPDRAAMQEALKATADADAVFIDVPGLDRT EEEEECCEECCCCCEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCH TSLAQWREEMGLAQVDAATHLTLSPYCDAVQIQAFLHRYKCDGPGSLVWTKLDEAVSFGT HHHHHHHHHCCCHHCCHHHEEEECCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH IVNVACAAGLPISALSYGAELKESLAPATEPLVWRLIFKRQIPGQAA HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQVKTFTGATSQEILARIKAEMGPDAVILGNRTYRKNGAVCHEITAGMERPQSANGASGG CCEEECCCCCHHHHHHHHHHHCCCCEEEECCCEECCCCCHHHHHHHHHCCCCCCCCCCCC APGGWGEWHKEWQQIKDQLFALMKPAIQLERLTPRQRVALEYLQREGISDAVAVDLYQRL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH VSQPGASVLECLCGMVPVKGWGPAYWDQRLHLMAGPFGFGKTTTALRFALHRRKAEPEAR HCCCCHHHHHHHHCCCCCCCCCCHHHHCCHHEEECCCCCCHHHHHHHHHHHHHCCCCCCE VAFINADCLRGNGRLVLRHWAELSNFSYLEAPDRAAMQEALKATADADAVFIDVPGLDRT EEEEECCEECCCCCEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCH TSLAQWREEMGLAQVDAATHLTLSPYCDAVQIQAFLHRYKCDGPGSLVWTKLDEAVSFGT HHHHHHHHHCCCHHCCHHHEEEECCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH IVNVACAAGLPISALSYGAELKESLAPATEPLVWRLIFKRQIPGQAA HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA