| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903541
Identifier: 220903541
GI number: 220903541
Start: 303980
End: 304954
Strand: Direct
Name: 220903541
Synonym: Ddes_0260
Alternate gene names: NA
Gene position: 303980-304954 (Clockwise)
Preceding gene: 220903540
Following gene: 220903542
Centisome position: 10.58
GC content: 60.0
Gene sequence:
>975_bases ATGAGCTTTCAGCCTGTCAGTTTTTCGCCTTCGGGTTCAGTTGCCGATCTTTCTGCAGGGCTCGGCCCTGCATTGGCAGG TTTGCAAAATGGTCTCGCGCAGGGCGCAAGCTCTTTGCAGGGACTTGATCTGCCACCGTCTGGATCCGGCGACCTCGAGG CGCAAATGAAGCAAGCCAGAGAGCAGGCCAGCACAGCTCTGGCCGAACCTGCGGCGTTTATGGCCATTACGCCTTTTCAG CACGGCATCGGCACCCGCAAGGGGGAATACGCCTATCTTACGCCTGCGCAGGCTTTGGCCACGCTGGCCAGCAGGTTTGA GGATGCGCAAGTTACGAGTGATGGCGACAATACAGAGCTGGCGCTTGTCGTGATGCTGGTGGCCACAGTCAGCCATGCAG CTATGGCCCAGGCACTGGAAGGGTTCAACAAGGTCTATCCCATCCCTCAACTGGAGCAGGTTTGCCGTCGGGCAAAGGCC CTGTCCACCCTTGAAACGGACAAGTTTACCATTCCCAAAGGGCCGGGTTTCCCTGCCTGGGGCCAGATGGCGCCGCAAAA AAACGCCACTGGCCAGGCCGTGGCCAAAGCCCTGGGCGGTATGTTGGCCGCGGGAGAAGGCGCGGGCATGGGGGCCACCT CCCCGGGCGACATGTTGGCGGCTTTTGCCCAAAAACAGACACAAAAGCTGCAGGAAAAAGCGGCGGACCTGCAAGCCCTG GCCGACAGCATGACAGGCGGCAATGACGCCTGGGTGGGCTTCAGCATTCATGCGCCGGGGCCGTACCTGTTCCGCTATCT GGGCAAATTGCCCATACCCTTTGACGAGGCCAGCAAATGCACGTCCCTGCTGTGCTGGTTTGGTAAGCCTGATCAGGTGG CCTTTTATCGTGAAAGCTTCGGCCTGTGCCGCCGAACACTCACCAACGCCGTCTGTCTGACCTGCCCTGGGGAGAATGCC GCATGTCCTTTCTGA
Upstream 100 bases:
>100_bases AAGCTTTGCAGATCGTTGCCGACATCGATGCGCTTATGCCCGAGGAAGGCCGCAAACGCATGGGCAGCCTTGTGGAAAAA TTCAAGGCACTGGAGGGAAT
Downstream 100 bases:
>100_bases TTCTGGATGATTTTACCGTGCCCGGCTTCGGACTCAACGTGAGCGTCAACGAGCAGCTTAAAAGCGAAGATGCCTCGGGC GAAAGCTCATCTACGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSFQPVSFSPSGSVADLSAGLGPALAGLQNGLAQGASSLQGLDLPPSGSGDLEAQMKQAREQASTALAEPAAFMAITPFQ HGIGTRKGEYAYLTPAQALATLASRFEDAQVTSDGDNTELALVVMLVATVSHAAMAQALEGFNKVYPIPQLEQVCRRAKA LSTLETDKFTIPKGPGFPAWGQMAPQKNATGQAVAKALGGMLAAGEGAGMGATSPGDMLAAFAQKQTQKLQEKAADLQAL ADSMTGGNDAWVGFSIHAPGPYLFRYLGKLPIPFDEASKCTSLLCWFGKPDQVAFYRESFGLCRRTLTNAVCLTCPGENA ACPF
Sequences:
>Translated_324_residues MSFQPVSFSPSGSVADLSAGLGPALAGLQNGLAQGASSLQGLDLPPSGSGDLEAQMKQAREQASTALAEPAAFMAITPFQ HGIGTRKGEYAYLTPAQALATLASRFEDAQVTSDGDNTELALVVMLVATVSHAAMAQALEGFNKVYPIPQLEQVCRRAKA LSTLETDKFTIPKGPGFPAWGQMAPQKNATGQAVAKALGGMLAAGEGAGMGATSPGDMLAAFAQKQTQKLQEKAADLQAL ADSMTGGNDAWVGFSIHAPGPYLFRYLGKLPIPFDEASKCTSLLCWFGKPDQVAFYRESFGLCRRTLTNAVCLTCPGENA ACPF >Mature_323_residues SFQPVSFSPSGSVADLSAGLGPALAGLQNGLAQGASSLQGLDLPPSGSGDLEAQMKQAREQASTALAEPAAFMAITPFQH GIGTRKGEYAYLTPAQALATLASRFEDAQVTSDGDNTELALVVMLVATVSHAAMAQALEGFNKVYPIPQLEQVCRRAKAL STLETDKFTIPKGPGFPAWGQMAPQKNATGQAVAKALGGMLAAGEGAGMGATSPGDMLAAFAQKQTQKLQEKAADLQALA DSMTGGNDAWVGFSIHAPGPYLFRYLGKLPIPFDEASKCTSLLCWFGKPDQVAFYRESFGLCRRTLTNAVCLTCPGENAA CPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33758; Mature: 33626
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQPVSFSPSGSVADLSAGLGPALAGLQNGLAQGASSLQGLDLPPSGSGDLEAQMKQAR CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH EQASTALAEPAAFMAITPFQHGIGTRKGEYAYLTPAQALATLASRFEDAQVTSDGDNTEL HHHHHHHHCCHHHEEECCHHHCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCHHH ALVVMLVATVSHAAMAQALEGFNKVYPIPQLEQVCRRAKALSTLETDKFTIPKGPGFPAW HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC GQMAPQKNATGQAVAKALGGMLAAGEGAGMGATSPGDMLAAFAQKQTQKLQEKAADLQAL CCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ADSMTGGNDAWVGFSIHAPGPYLFRYLGKLPIPFDEASKCTSLLCWFGKPDQVAFYRESF HHHCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH GLCRRTLTNAVCLTCPGENAACPF HHHHHHHHCCEEEECCCCCCCCCC >Mature Secondary Structure SFQPVSFSPSGSVADLSAGLGPALAGLQNGLAQGASSLQGLDLPPSGSGDLEAQMKQAR CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH EQASTALAEPAAFMAITPFQHGIGTRKGEYAYLTPAQALATLASRFEDAQVTSDGDNTEL HHHHHHHHCCHHHEEECCHHHCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCHHH ALVVMLVATVSHAAMAQALEGFNKVYPIPQLEQVCRRAKALSTLETDKFTIPKGPGFPAW HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC GQMAPQKNATGQAVAKALGGMLAAGEGAGMGATSPGDMLAAFAQKQTQKLQEKAADLQAL CCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ADSMTGGNDAWVGFSIHAPGPYLFRYLGKLPIPFDEASKCTSLLCWFGKPDQVAFYRESF HHHCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH GLCRRTLTNAVCLTCPGENAACPF HHHHHHHHCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA