Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903538

Identifier: 220903538

GI number: 220903538

Start: 300473

End: 302302

Strand: Direct

Name: 220903538

Synonym: Ddes_0257

Alternate gene names: NA

Gene position: 300473-302302 (Clockwise)

Preceding gene: 220903537

Following gene: 220903539

Centisome position: 10.46

GC content: 61.2

Gene sequence:

>1830_bases
ATGAGCACTATTCTGACCGCAGCGGGCGAAAGCCTCATTGCCCGCCTTCAGGCCGAAGGCAAGGCCCTTGTTATTGACAC
AATGATCCTGGCCAACGTGCCCGGGCAGGATCACACCCAGGCCATTGCGCCAGGCGTCACCGTGCCGGCAGAAGCACAAA
TCGCCCTGCGCTACGCCATACCCCCGCAGTACCGCGCCTACGTCAACCCCAACCAGGTTGTCTACAGCGCCATGCTTGGC
AGCGATATGGGCGACTTTACTTTCAACTGGCAGGGCCTGTGGTGCAGCGAGCACGAGACGCTGGTTGCTGTGGCCACGTT
CCCCGCACTTGAAAAACGCCGCTACGACGAGGCCAACGGCAAGACGGGCAACAACCTGACCCGCAACTTTCTGCTCACGT
TCACGGGTGCCCGCGAGCTCACTGGCCTGACCATCAGCGCCGACGTGTGGCAGCTTGATTTTACCGTGCGCCTCAATGGC
ATGGACGAGCGTGAGCGCCTTTCCAACTTCGACATTTATGGCCATGCCTTTTTCGACGCGCAAGGCTGGCTGCTGCAAAA
AACGTCAGAGGCCTACGCCTTTACCCCTGGGCTGGGCTATGTGGGCGGTATCCGCGCCGAGCTTGCGGAAGCTCTGCCCC
TGGCCACGCCTGAAGCTGCAAACTTGCCGCAGAATGTCTGGCTTGACGTGTGCCTGCGCCATACCGGCAGCGACCGTATT
GCAGAAGCCGCGCCCATGCTTACGCCGCCCACAGCCCCCCTGGCTGACAGCGTAGCGGACGAAACATGCCTCATGCACTA
CCGCGCCCTGGTTGCCCGCATAGAGGATGACGGCACAGTTACGGATCTGCGACCGCGCAAAACCTCTGGCGCTCTGCCCA
TACCGGACGTGGCCACGCCCGAAGTGGCGGGCACTATGCGTCCTGATGATGTGACCTGCCATATGGACGCGGATCTGCTC
AAGGTCAGCGGACGGTACACCATATGCGCAACAGCAGCGGCTACAGCGGCCAAAACCGCAAGCCTTGACCACTTCGCGCT
TGTCCCGGGCGTGGCCGTTGAGGTTGCGTTTGCCAACGTCAACATAGCTGCCAACCCCACTTTGAATATCAATGGCAGCG
GGGCCAAACCGATCACGTACTGCGGGGTACCCGTTGAGGTGGGCGCGTTGGCGCAAGGGCAGGTTTATACCCTGATTTAT
TCCGGCAGTAGCTGGCAGATATTGGGGGGAATGGCTCCGTACCCCATAGGACAGTATGTCTGGTGGGAGGACACACTTGT
GCGTCCCGGCTTCAAGCCTGCCAACGCCAATATCATTTCCGATTTTGCGGCCACATACCCGCAGATGGCGGCCTACCTCT
CCACGCCCCACGGGGCAGCACGGCTGTTTGCCTCGCTTGCGGAGTATGAGGTGGCCCACAATGCGGCGTGGGCTACACTC
GCGGACGGCTCCAAAGTCTCCTGGTCGAACATCGGCGGCGTGGCAAAATTTTTCTGGAACAAAGCGGCCGACACTCTTCT
GATGCCGGATTTGACGGAGATGACCAGATTTATGGCAGGTGCGTCTCTCGGCGTGGGAGGCGTGCAGGGGGACCGGGGGC
GGAATGCTAACGGGTCTGCTCTGGTCGTTACGGGCACGGGGGCGTCTGGATCCGGTGCGCTGTATCATCCGGGCGGACCT
AGCGAGTTTTTGACGGGTCAGGGGTCCAATAATGCACGATTTTCCAGCCTCTCTATTGACCTCTCCCGCGTCCAGCCCAT
CGGCCCCACATTCGCCCCTCGGCGTTGGGGAGCGTTGGCCTGCGCATACCTGGGCCAGCCTGCCTCATGA

Upstream 100 bases:

>100_bases
AGGAAACGGTGGAAGCCGCCATGAGCACCCGCGCCATTGCTGATGCTGGCGCGCGCCTTTCTGTTTTTGACCACCATACC
GCTACCGTGGAGGCCCACGC

Downstream 100 bases:

>100_bases
CGCCGGAATACCGAGCCAGCAGCACGCGAGAGCACCCCAACGCCTGGGAGCAAACGCGGGGCCTGTGGGCTGGACGCGCG
CGAGTGAAAAATCAGTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Tail Fiber Repeat 2-Containing Protein; Phage Tail Fiber-Like Protein; Prophage; Tail Fiber; Tail Collar Domain Protein; Phage Tail Fiber Repeat; Tail Fiber Protein H

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MSTILTAAGESLIARLQAEGKALVIDTMILANVPGQDHTQAIAPGVTVPAEAQIALRYAIPPQYRAYVNPNQVVYSAMLG
SDMGDFTFNWQGLWCSEHETLVAVATFPALEKRRYDEANGKTGNNLTRNFLLTFTGARELTGLTISADVWQLDFTVRLNG
MDERERLSNFDIYGHAFFDAQGWLLQKTSEAYAFTPGLGYVGGIRAELAEALPLATPEAANLPQNVWLDVCLRHTGSDRI
AEAAPMLTPPTAPLADSVADETCLMHYRALVARIEDDGTVTDLRPRKTSGALPIPDVATPEVAGTMRPDDVTCHMDADLL
KVSGRYTICATAAATAAKTASLDHFALVPGVAVEVAFANVNIAANPTLNINGSGAKPITYCGVPVEVGALAQGQVYTLIY
SGSSWQILGGMAPYPIGQYVWWEDTLVRPGFKPANANIISDFAATYPQMAAYLSTPHGAARLFASLAEYEVAHNAAWATL
ADGSKVSWSNIGGVAKFFWNKAADTLLMPDLTEMTRFMAGASLGVGGVQGDRGRNANGSALVVTGTGASGSGALYHPGGP
SEFLTGQGSNNARFSSLSIDLSRVQPIGPTFAPRRWGALACAYLGQPAS

Sequences:

>Translated_609_residues
MSTILTAAGESLIARLQAEGKALVIDTMILANVPGQDHTQAIAPGVTVPAEAQIALRYAIPPQYRAYVNPNQVVYSAMLG
SDMGDFTFNWQGLWCSEHETLVAVATFPALEKRRYDEANGKTGNNLTRNFLLTFTGARELTGLTISADVWQLDFTVRLNG
MDERERLSNFDIYGHAFFDAQGWLLQKTSEAYAFTPGLGYVGGIRAELAEALPLATPEAANLPQNVWLDVCLRHTGSDRI
AEAAPMLTPPTAPLADSVADETCLMHYRALVARIEDDGTVTDLRPRKTSGALPIPDVATPEVAGTMRPDDVTCHMDADLL
KVSGRYTICATAAATAAKTASLDHFALVPGVAVEVAFANVNIAANPTLNINGSGAKPITYCGVPVEVGALAQGQVYTLIY
SGSSWQILGGMAPYPIGQYVWWEDTLVRPGFKPANANIISDFAATYPQMAAYLSTPHGAARLFASLAEYEVAHNAAWATL
ADGSKVSWSNIGGVAKFFWNKAADTLLMPDLTEMTRFMAGASLGVGGVQGDRGRNANGSALVVTGTGASGSGALYHPGGP
SEFLTGQGSNNARFSSLSIDLSRVQPIGPTFAPRRWGALACAYLGQPAS
>Mature_608_residues
STILTAAGESLIARLQAEGKALVIDTMILANVPGQDHTQAIAPGVTVPAEAQIALRYAIPPQYRAYVNPNQVVYSAMLGS
DMGDFTFNWQGLWCSEHETLVAVATFPALEKRRYDEANGKTGNNLTRNFLLTFTGARELTGLTISADVWQLDFTVRLNGM
DERERLSNFDIYGHAFFDAQGWLLQKTSEAYAFTPGLGYVGGIRAELAEALPLATPEAANLPQNVWLDVCLRHTGSDRIA
EAAPMLTPPTAPLADSVADETCLMHYRALVARIEDDGTVTDLRPRKTSGALPIPDVATPEVAGTMRPDDVTCHMDADLLK
VSGRYTICATAAATAAKTASLDHFALVPGVAVEVAFANVNIAANPTLNINGSGAKPITYCGVPVEVGALAQGQVYTLIYS
GSSWQILGGMAPYPIGQYVWWEDTLVRPGFKPANANIISDFAATYPQMAAYLSTPHGAARLFASLAEYEVAHNAAWATLA
DGSKVSWSNIGGVAKFFWNKAADTLLMPDLTEMTRFMAGASLGVGGVQGDRGRNANGSALVVTGTGASGSGALYHPGGPS
EFLTGQGSNNARFSSLSIDLSRVQPIGPTFAPRRWGALACAYLGQPAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64629; Mature: 64497

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTILTAAGESLIARLQAEGKALVIDTMILANVPGQDHTQAIAPGVTVPAEAQIALRYAI
CCCEEHHCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEEEC
PPQYRAYVNPNQVVYSAMLGSDMGDFTFNWQGLWCSEHETLVAVATFPALEKRRYDEANG
CCCCEEEECCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCHHHHHCCCCCCC
KTGNNLTRNFLLTFTGARELTGLTISADVWQLDFTVRLNGMDERERLSNFDIYGHAFFDA
CCCCCCEEEEEEEEECCCHHCEEEEECCEEEEEEEEEECCCCHHHHHCCCCEEEEEEECC
QGWLLQKTSEAYAFTPGLGYVGGIRAELAEALPLATPEAANLPQNVWLDVCLRHTGSDRI
CCEEEEECCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHH
AEAAPMLTPPTAPLADSVADETCLMHYRALVARIEDDGTVTDLRPRKTSGALPIPDVATP
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCCCCCCCCCC
EVAGTMRPDDVTCHMDADLLKVSGRYTICATAAATAAKTASLDHFALVPGVAVEVAFANV
CCCCCCCCCCEEEEECCCEEEECCCEEEEEEHHHHHHHHCCCCCEEECCCEEEEEEEEEE
NIAANPTLNINGSGAKPITYCGVPVEVGALAQGQVYTLIYSGSSWQILGGMAPYPIGQYV
EEECCCEEEECCCCCCCEEEECCCEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCCEE
WWEDTLVRPGFKPANANIISDFAATYPQMAAYLSTPHGAARLFASLAEYEVAHNAAWATL
EECCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEE
ADGSKVSWSNIGGVAKFFWNKAADTLLMPDLTEMTRFMAGASLGVGGVQGDRGRNANGSA
CCCCEECHHHCCHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
LVVTGTGASGSGALYHPGGPSEFLTGQGSNNARFSSLSIDLSRVQPIGPTFAPRRWGALA
EEEEECCCCCCCEEECCCCCCHHEECCCCCCCEEEEEEEEHHHCCCCCCCCCCCCHHHHH
CAYLGQPAS
HHHCCCCCC
>Mature Secondary Structure 
STILTAAGESLIARLQAEGKALVIDTMILANVPGQDHTQAIAPGVTVPAEAQIALRYAI
CCEEHHCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEEEC
PPQYRAYVNPNQVVYSAMLGSDMGDFTFNWQGLWCSEHETLVAVATFPALEKRRYDEANG
CCCCEEEECCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCHHHHHCCCCCCC
KTGNNLTRNFLLTFTGARELTGLTISADVWQLDFTVRLNGMDERERLSNFDIYGHAFFDA
CCCCCCEEEEEEEEECCCHHCEEEEECCEEEEEEEEEECCCCHHHHHCCCCEEEEEEECC
QGWLLQKTSEAYAFTPGLGYVGGIRAELAEALPLATPEAANLPQNVWLDVCLRHTGSDRI
CCEEEEECCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHH
AEAAPMLTPPTAPLADSVADETCLMHYRALVARIEDDGTVTDLRPRKTSGALPIPDVATP
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCCCCCCCCCC
EVAGTMRPDDVTCHMDADLLKVSGRYTICATAAATAAKTASLDHFALVPGVAVEVAFANV
CCCCCCCCCCEEEEECCCEEEECCCEEEEEEHHHHHHHHCCCCCEEECCCEEEEEEEEEE
NIAANPTLNINGSGAKPITYCGVPVEVGALAQGQVYTLIYSGSSWQILGGMAPYPIGQYV
EEECCCEEEECCCCCCCEEEECCCEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCCEE
WWEDTLVRPGFKPANANIISDFAATYPQMAAYLSTPHGAARLFASLAEYEVAHNAAWATL
EECCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEE
ADGSKVSWSNIGGVAKFFWNKAADTLLMPDLTEMTRFMAGASLGVGGVQGDRGRNANGSA
CCCCEECHHHCCHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
LVVTGTGASGSGALYHPGGPSEFLTGQGSNNARFSSLSIDLSRVQPIGPTFAPRRWGALA
EEEEECCCCCCCEEECCCCCCHHEECCCCCCCEEEEEEEEHHHCCCCCCCCCCCCHHHHH
CAYLGQPAS
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA