| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903537
Identifier: 220903537
GI number: 220903537
Start: 299862
End: 300476
Strand: Direct
Name: 220903537
Synonym: Ddes_0256
Alternate gene names: NA
Gene position: 299862-300476 (Clockwise)
Preceding gene: 220903536
Following gene: 220903538
Centisome position: 10.44
GC content: 59.67
Gene sequence:
>615_bases ATGAGCTCGCCGCTCTCGCCTTTTTCCTTGTCCTTCTGGATGAACGGAGCCGAGAATACCAAGCTCGGCAAGGCAGCCCA TGCGTGGTTTTCCCTGCTTGGTAAAACCGCAGCCTGGAGCCTTGATAACCGCGACCCCATGACTTGCGACGAACGCACTC TGAACCTACTCGCTTGGGAGCGCTGCGTGCGGCGTTATCCCGGGGAACCTGAACGCCTCTATCGCCTGCGCGTCAAATAC GCCTATGCCAATGCCAAAGATTCCGGTCAGACGGCAGGCTGGGGCCGTATTTTTGAGCGCCTGGAGCTTGGCGGCCTGAC CCTTGCCGAGCGTGTGCCAGGGCAAGACTGGGACCGCGTGGGCATTATTGCCGATGATTCGCAGTTTCCCGACCAGCAGA ACGTGCTGGAAATCATTATTGAAGACTACGGCCGCACCTGCCGCCGTTACTATTTCGACAGCCGCATTCCTATCCCGGCC CTGGCCCATGTGGGCCGCTTTTCCTGGCATCAGGAAACGGTGGAAGCCGCCATGAGCACCCGCGCCATTGCTGATGCTGG CGCGCGCCTTTCTGTTTTTGACCACCATACCGCTACCGTGGAGGCCCACGCATGA
Upstream 100 bases:
>100_bases CTGATCTGAAAAGTGTGGAATTTCACCGGGGCGAGGATATTGTATCGCTTTTGACCTTGCCAGTGCTTGAACGCCTCGAC ATTACAATGGGGGCTGCTGC
Downstream 100 bases:
>100_bases GCACTATTCTGACCGCAGCGGGCGAAAGCCTCATTGCCCGCCTTCAGGCCGAAGGCAAGGCCCTTGTTATTGACACAATG ATCCTGGCCAACGTGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Like Protein; Bacteriophage Protein; Hemolysins-Like Protein Containing CBS Domains
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSSPLSPFSLSFWMNGAENTKLGKAAHAWFSLLGKTAAWSLDNRDPMTCDERTLNLLAWERCVRRYPGEPERLYRLRVKY AYANAKDSGQTAGWGRIFERLELGGLTLAERVPGQDWDRVGIIADDSQFPDQQNVLEIIIEDYGRTCRRYYFDSRIPIPA LAHVGRFSWHQETVEAAMSTRAIADAGARLSVFDHHTATVEAHA
Sequences:
>Translated_204_residues MSSPLSPFSLSFWMNGAENTKLGKAAHAWFSLLGKTAAWSLDNRDPMTCDERTLNLLAWERCVRRYPGEPERLYRLRVKY AYANAKDSGQTAGWGRIFERLELGGLTLAERVPGQDWDRVGIIADDSQFPDQQNVLEIIIEDYGRTCRRYYFDSRIPIPA LAHVGRFSWHQETVEAAMSTRAIADAGARLSVFDHHTATVEAHA >Mature_203_residues SSPLSPFSLSFWMNGAENTKLGKAAHAWFSLLGKTAAWSLDNRDPMTCDERTLNLLAWERCVRRYPGEPERLYRLRVKYA YANAKDSGQTAGWGRIFERLELGGLTLAERVPGQDWDRVGIIADDSQFPDQQNVLEIIIEDYGRTCRRYYFDSRIPIPAL AHVGRFSWHQETVEAAMSTRAIADAGARLSVFDHHTATVEAHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23105; Mature: 22974
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPLSPFSLSFWMNGAENTKLGKAAHAWFSLLGKTAAWSLDNRDPMTCDERTLNLLAWE CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHH RCVRRYPGEPERLYRLRVKYAYANAKDSGQTAGWGRIFERLELGGLTLAERVPGQDWDRV HHHHHCCCCHHHHHEEHEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCEE GIIADDSQFPDQQNVLEIIIEDYGRTCRRYYFDSRIPIPALAHVGRFSWHQETVEAAMST EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHH RAIADAGARLSVFDHHTATVEAHA HHHHHCCCEEEEEECCEEEEEECC >Mature Secondary Structure SSPLSPFSLSFWMNGAENTKLGKAAHAWFSLLGKTAAWSLDNRDPMTCDERTLNLLAWE CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHH RCVRRYPGEPERLYRLRVKYAYANAKDSGQTAGWGRIFERLELGGLTLAERVPGQDWDRV HHHHHCCCCHHHHHEEHEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCEE GIIADDSQFPDQQNVLEIIIEDYGRTCRRYYFDSRIPIPALAHVGRFSWHQETVEAAMST EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHH RAIADAGARLSVFDHHTATVEAHA HHHHHCCCEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA