| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903526
Identifier: 220903526
GI number: 220903526
Start: 292441
End: 293124
Strand: Direct
Name: 220903526
Synonym: Ddes_0245
Alternate gene names: NA
Gene position: 292441-293124 (Clockwise)
Preceding gene: 220903525
Following gene: 220903527
Centisome position: 10.18
GC content: 57.6
Gene sequence:
>684_bases ATGAGTGATTTTCGCCTGACCATAAAATCAGATGCCCGTAACAGTCTGCTCGACCGCCAGCTCAACGCCTTTAAACACGA TGTGCGGGCACGGCAGAAGCACGCACACGCCCTGGGCGGCATGGTTCGTTCTGCCGCAAAACAGAATATCCGTGGTCAAA AAACTTTTGAAGGTCAGCCCTTTACCCCTCGTCAGGCCAGCCGGAAAAAAGCGGCAATGCTCCGCGGGCTGGCAAAAAAA CTCGCGGTCATCAGCAAGGCGTCTGAAGGCGGGGGCGTCATTGTGGGCTGGCGCAACAATTTTGAAGCAGGCATTGCAGG CCGCCACCAATGGGGCCAGGGCGAAGACTGGACGCCGCAGCGGGCTAGGGCAGAGCGGGGTATCCCCAATTACAAGGCTC CTTGTACCCGCGCACAGGCTAAAGCTCTGAATCAGGCTGGCTACAGGCGCGCGCGCAAGGGCAAACCTGCCAAAAAAATG AGCGCCAAGGCTCTGCAGCAAAGTCTCACTCTAGGGCAGGCGGCGCTTATTTTGCGCCTCATGCGTACTGGGCAGGCCAA GGGCAAGCAGCATTGGCGCGATACTGTTCCTGCCCGTCCCTTTTTGGGCGTTACTTCGGCCAAGGCCAAAGAATATAGCG AACAGCTTGCCGCCAAAATTATGCAGACCACCCGCAAGGGATAG
Upstream 100 bases:
>100_bases GGTCCCTGGCTTCCGTGACCATCACGCCAGCAACCACGCTTACGGCGCTTGCCGCCGTTAATACCGGGGCGGGCCATATG CCGGGCAAGGGTGATGGCAG
Downstream 100 bases:
>100_bases AGAGGATACCCATGCTCGGAACCGTACAAGTCAACAATCTGAATTTGATTCAAGGCCCGCTGACCGCTGTTGAAAACTTT TTGCTGTTCACTGGCCAGGG
Product: phage virion morphogenesis protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSDFRLTIKSDARNSLLDRQLNAFKHDVRARQKHAHALGGMVRSAAKQNIRGQKTFEGQPFTPRQASRKKAAMLRGLAKK LAVISKASEGGGVIVGWRNNFEAGIAGRHQWGQGEDWTPQRARAERGIPNYKAPCTRAQAKALNQAGYRRARKGKPAKKM SAKALQQSLTLGQAALILRLMRTGQAKGKQHWRDTVPARPFLGVTSAKAKEYSEQLAAKIMQTTRKG
Sequences:
>Translated_227_residues MSDFRLTIKSDARNSLLDRQLNAFKHDVRARQKHAHALGGMVRSAAKQNIRGQKTFEGQPFTPRQASRKKAAMLRGLAKK LAVISKASEGGGVIVGWRNNFEAGIAGRHQWGQGEDWTPQRARAERGIPNYKAPCTRAQAKALNQAGYRRARKGKPAKKM SAKALQQSLTLGQAALILRLMRTGQAKGKQHWRDTVPARPFLGVTSAKAKEYSEQLAAKIMQTTRKG >Mature_226_residues SDFRLTIKSDARNSLLDRQLNAFKHDVRARQKHAHALGGMVRSAAKQNIRGQKTFEGQPFTPRQASRKKAAMLRGLAKKL AVISKASEGGGVIVGWRNNFEAGIAGRHQWGQGEDWTPQRARAERGIPNYKAPCTRAQAKALNQAGYRRARKGKPAKKMS AKALQQSLTLGQAALILRLMRTGQAKGKQHWRDTVPARPFLGVTSAKAKEYSEQLAAKIMQTTRKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25092; Mature: 24961
Theoretical pI: Translated: 12.12; Mature: 12.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFRLTIKSDARNSLLDRQLNAFKHDVRARQKHAHALGGMVRSAAKQNIRGQKTFEGQP CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC FTPRQASRKKAAMLRGLAKKLAVISKASEGGGVIVGWRNNFEAGIAGRHQWGQGEDWTPQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHH RARAERGIPNYKAPCTRAQAKALNQAGYRRARKGKPAKKMSAKALQQSLTLGQAALILRL HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MRTGQAKGKQHWRDTVPARPFLGVTSAKAKEYSEQLAAKIMQTTRKG HHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDFRLTIKSDARNSLLDRQLNAFKHDVRARQKHAHALGGMVRSAAKQNIRGQKTFEGQP CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC FTPRQASRKKAAMLRGLAKKLAVISKASEGGGVIVGWRNNFEAGIAGRHQWGQGEDWTPQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHH RARAERGIPNYKAPCTRAQAKALNQAGYRRARKGKPAKKMSAKALQQSLTLGQAALILRL HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MRTGQAKGKQHWRDTVPARPFLGVTSAKAKEYSEQLAAKIMQTTRKG HHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA