| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903525
Identifier: 220903525
GI number: 220903525
Start: 291920
End: 292444
Strand: Direct
Name: 220903525
Synonym: Ddes_0244
Alternate gene names: NA
Gene position: 291920-292444 (Clockwise)
Preceding gene: 220903524
Following gene: 220903526
Centisome position: 10.16
GC content: 60.76
Gene sequence:
>525_bases ATGCGCAAGCTGGCCGCCCTTGTCGGGCACATTCTTGAAGTTACAGGCCTGCCGCCAGAACAGGTGTTTGCCTATGCTGA CCAGGGCGATCTGTATCCCCTGGGCCGTGACCGTGCCCCCTTGCGCCCGGAACCGGGGGAAGATGCCCCCGTTCTGCGGC AGGTTGAGCTTGGCACATTCCGCTACGACGGCGTGATCCAGATAGAGCGTTACCCTGGAGCCGGGCACGATTTTGCCGCC CTTATCACCACATGGCTTATTGAGCGCGATCCGGCCCGTGACGGCCTTGCTGATCCGGCTCTTGATATTGAACTCAATAT CCGTGGTGGGGACTGCGATGTGCAGATGACCATTGAATTTGAGGAAAGGCTGGAAGCCGTGGAGGATCCGGCGGGCAACA TACCCTTTGACGGTACCCGCTGGTCCCTGGCTTCCGTGACCATCACGCCAGCAACCACGCTTACGGCGCTTGCCGCCGTT AATACCGGGGCGGGCCATATGCCGGGCAAGGGTGATGGCAGATGA
Upstream 100 bases:
>100_bases CAAAGGAAGCGCCTGAAAGCGCGCAGGCCTTTTTCGCCCAGGCAGCCAATGCCCTGGCCGCAATCACCGGACGTACCTTT ATTTCGGTGGAGGCCATCTA
Downstream 100 bases:
>100_bases GTGATTTTCGCCTGACCATAAAATCAGATGCCCGTAACAGTCTGCTCGACCGCCAGCTCAACGCCTTTAAACACGATGTG CGGGCACGGCAGAAGCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRKLAALVGHILEVTGLPPEQVFAYADQGDLYPLGRDRAPLRPEPGEDAPVLRQVELGTFRYDGVIQIERYPGAGHDFAA LITTWLIERDPARDGLADPALDIELNIRGGDCDVQMTIEFEERLEAVEDPAGNIPFDGTRWSLASVTITPATTLTALAAV NTGAGHMPGKGDGR
Sequences:
>Translated_174_residues MRKLAALVGHILEVTGLPPEQVFAYADQGDLYPLGRDRAPLRPEPGEDAPVLRQVELGTFRYDGVIQIERYPGAGHDFAA LITTWLIERDPARDGLADPALDIELNIRGGDCDVQMTIEFEERLEAVEDPAGNIPFDGTRWSLASVTITPATTLTALAAV NTGAGHMPGKGDGR >Mature_174_residues MRKLAALVGHILEVTGLPPEQVFAYADQGDLYPLGRDRAPLRPEPGEDAPVLRQVELGTFRYDGVIQIERYPGAGHDFAA LITTWLIERDPARDGLADPALDIELNIRGGDCDVQMTIEFEERLEAVEDPAGNIPFDGTRWSLASVTITPATTLTALAAV NTGAGHMPGKGDGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18774; Mature: 18774
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLAALVGHILEVTGLPPEQVFAYADQGDLYPLGRDRAPLRPEPGEDAPVLRQVELGTF CHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEE RYDGVIQIERYPGAGHDFAALITTWLIERDPARDGLADPALDIELNIRGGDCDVQMTIEF EECCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEH EERLEAVEDPAGNIPFDGTRWSLASVTITPATTLTALAAVNTGAGHMPGKGDGR HHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRKLAALVGHILEVTGLPPEQVFAYADQGDLYPLGRDRAPLRPEPGEDAPVLRQVELGTF CHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEE RYDGVIQIERYPGAGHDFAALITTWLIERDPARDGLADPALDIELNIRGGDCDVQMTIEF EECCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEH EERLEAVEDPAGNIPFDGTRWSLASVTITPATTLTALAAVNTGAGHMPGKGDGR HHHHHHHCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA