| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220903524
Identifier: 220903524
GI number: 220903524
Start: 291453
End: 291920
Strand: Direct
Name: 220903524
Synonym: Ddes_0243
Alternate gene names: NA
Gene position: 291453-291920 (Clockwise)
Preceding gene: 220903523
Following gene: 220903525
Centisome position: 10.14
GC content: 57.69
Gene sequence:
>468_bases ATGAGCTCCCTGAAGGGTTTTGGCATTACAACCGGCAAAACTGCCACCACAGTGCTTGATGGGGATGGTTTTTATCCTGA TCTGGCTGTTGCCGAGTTTATGGAGCTTTACCGTTTGCCCGCCGAATACGCCGAAGCGCTCATTGCAGACCATCTTGACC TTGCCCGGCTTTGGGCCGCTGGCGAACTGGCCGCGTGGCGTGAAAAACAGCAGGCATCTGGCCACACTGCCCTTGATCAA ATTTCTGTTCACGGCATTTCTGGCGGTGCGCTGCGACTCTACAAGCGGGCAGTATTTTGCCGGGCCAAGGCCCTGCTGTT GCCGCAGTTCGCCACCATTGAACGCCGCGAACCCGCCCGCAACGATGCAAAGGAAGCGCCTGAAAGCGCGCAGGCCTTTT TCGCCCAGGCAGCCAATGCCCTGGCCGCAATCACCGGACGTACCTTTATTTCGGTGGAGGCCATCTAA
Upstream 100 bases:
>100_bases TACTCATCCCCCAACCGGAAGGCGCGGGCGGCGTTTCTCTAGCGGGTCGGCCGCTGCCGTAGAGGCGCAAGCCTCGCGCC TTCCTACTTTTGAGGTTTTC
Downstream 100 bases:
>100_bases TGCGCAAGCTGGCCGCCCTTGTCGGGCACATTCTTGAAGTTACAGGCCTGCCGCCAGAACAGGTGTTTGCCTATGCTGAC CAGGGCGATCTGTATCCCCT
Product: head completion protein
Products: NA
Alternate protein names: Prophage; Head Completion Protein; Phage Head Completion Protein
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSSLKGFGITTGKTATTVLDGDGFYPDLAVAEFMELYRLPAEYAEALIADHLDLARLWAAGELAAWREKQQASGHTALDQ ISVHGISGGALRLYKRAVFCRAKALLLPQFATIERREPARNDAKEAPESAQAFFAQAANALAAITGRTFISVEAI
Sequences:
>Translated_155_residues MSSLKGFGITTGKTATTVLDGDGFYPDLAVAEFMELYRLPAEYAEALIADHLDLARLWAAGELAAWREKQQASGHTALDQ ISVHGISGGALRLYKRAVFCRAKALLLPQFATIERREPARNDAKEAPESAQAFFAQAANALAAITGRTFISVEAI >Mature_154_residues SSLKGFGITTGKTATTVLDGDGFYPDLAVAEFMELYRLPAEYAEALIADHLDLARLWAAGELAAWREKQQASGHTALDQI SVHGISGGALRLYKRAVFCRAKALLLPQFATIERREPARNDAKEAPESAQAFFAQAANALAAITGRTFISVEAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16712; Mature: 16581
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLKGFGITTGKTATTVLDGDGFYPDLAVAEFMELYRLPAEYAEALIADHLDLARLWAA CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GELAAWREKQQASGHTALDQISVHGISGGALRLYKRAVFCRAKALLLPQFATIERREPAR HHHHHHHHHHHCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCC NDAKEAPESAQAFFAQAANALAAITGRTFISVEAI CHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECC >Mature Secondary Structure SSLKGFGITTGKTATTVLDGDGFYPDLAVAEFMELYRLPAEYAEALIADHLDLARLWAA CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GELAAWREKQQASGHTALDQISVHGISGGALRLYKRAVFCRAKALLLPQFATIERREPAR HHHHHHHHHHHCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCC NDAKEAPESAQAFFAQAANALAAITGRTFISVEAI CHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA