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The map label for this gene is xerC [C]

Identifier: 220903503

GI number: 220903503

Start: 277508

End: 278539

Strand: Reverse

Name: xerC [C]

Synonym: Ddes_0222

Alternate gene names: 220903503

Gene position: 278539-277508 (Counterclockwise)

Preceding gene: 220903504

Following gene: 220903500

Centisome position: 9.69

GC content: 51.36

Gene sequence:

>1032_bases
ATGAGTATTGGCTGCAAAAAAAACGGAACATGGTACGTACAATACCGCATCCCTGGGGAGAAATACCCACTCCGCGAATA
CACGGGAATTGGCGAGGAAGGCAAAACCGCAGCCCGTGAACTAGACAGGCAGGTCAAAGAGCAGAAAGCAAAGGGGGCTG
TTACTAAGCGGGTACAACGGACTGGCCGGATACACCTGGATCAGTTGGCCCAAGCATATCTCACTGAGAGGAAATTGAGC
GGAAAATCAGCACAATGGCTTGAAGAGATGGAAACTCTTTTCAACAAAAAAATCTTGCCGAGGTTATGCTTTTGCCCTGT
TGATGATCTCAAATACCCAGACGTTATTGCTATGGCCGCCGAAGCTTGGCCCACAGTCTCCCTGGCAACTCGGCAGCGAT
ACCTTGGCTATCTCAAGGCGGCTTTCAACTTTGGGCGCAAGCATGAACTCACCGCCACTAATCCACTCGACAAGTGGGAG
CGGCAGAAAGAGCCACGTCTCGAATTCAACTTTTCTGTCCCTGACCTCCTAAAGCTATATGACTGCGCAGCACCACACCT
CGCGTGGGCAATAAAAGTAGAGTGGCACATCGGCACTCGCCCAGGCCGTTCAGAACTCTTTGCCCTCCGATGGCGACATA
TCGACTTTGAATCTAGGATCATCAAAATATATGGGACAAAAACCGACGGTTCCTTTCGTGCCGTCCCCATGCTCCCACAC
TTCGAGGCTGCACTTAAAGAAAAGCGGAAACAAGCCCTGGGGGAGTTTGTTGTTGACTACAAAGGGCGGCAGGTAAAAAA
GTTACAGACAGCGTTTGAAGGAGCGCAAAGACGTGCAAATCTTGGATACCACGTTCGCCTGTATGACATTCGCCACCTAT
TTGCCACCACCATGCTTAATGGCGGTGCGGATCATGCTGCCGTTGCTAAACTTTTGGGGCATAGCGCCGTCTCGACGACA
CACAAATGGTACTACCACGTCTTACCTGGCGAGACTCGTCGCGCTTTGGCCGTAAAGCCTGACCCCTTCTAG

Upstream 100 bases:

>100_bases
CTGAAGACCTGGATGCCTTTATGGTTGACTGCAATTACTTTTTACACTCTGCCCGACGATCTCAAATTCGGGAAAAATCT
TCATTCACTCCCGTGAGCAT

Downstream 100 bases:

>100_bases
GGACTACAAGGGACTACACATCCTTTTCCCTATTAATCCCCTATTAACAAATTCAAGCAGTTATGAGCACCGTTCGGAAA
TCATTATTTAATTTTGTTGT

Product: integrase family protein

Products: NA

Alternate protein names: Integrase; Phage Integrase Family Protein; Phage Integrase; Integrase Family Protein; Site Specific Recombinase; XerC/CodV Family Integrase/Recombinase; Bacteriophage Integrase

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSIGCKKNGTWYVQYRIPGEKYPLREYTGIGEEGKTAARELDRQVKEQKAKGAVTKRVQRTGRIHLDQLAQAYLTERKLS
GKSAQWLEEMETLFNKKILPRLCFCPVDDLKYPDVIAMAAEAWPTVSLATRQRYLGYLKAAFNFGRKHELTATNPLDKWE
RQKEPRLEFNFSVPDLLKLYDCAAPHLAWAIKVEWHIGTRPGRSELFALRWRHIDFESRIIKIYGTKTDGSFRAVPMLPH
FEAALKEKRKQALGEFVVDYKGRQVKKLQTAFEGAQRRANLGYHVRLYDIRHLFATTMLNGGADHAAVAKLLGHSAVSTT
HKWYYHVLPGETRRALAVKPDPF

Sequences:

>Translated_343_residues
MSIGCKKNGTWYVQYRIPGEKYPLREYTGIGEEGKTAARELDRQVKEQKAKGAVTKRVQRTGRIHLDQLAQAYLTERKLS
GKSAQWLEEMETLFNKKILPRLCFCPVDDLKYPDVIAMAAEAWPTVSLATRQRYLGYLKAAFNFGRKHELTATNPLDKWE
RQKEPRLEFNFSVPDLLKLYDCAAPHLAWAIKVEWHIGTRPGRSELFALRWRHIDFESRIIKIYGTKTDGSFRAVPMLPH
FEAALKEKRKQALGEFVVDYKGRQVKKLQTAFEGAQRRANLGYHVRLYDIRHLFATTMLNGGADHAAVAKLLGHSAVSTT
HKWYYHVLPGETRRALAVKPDPF
>Mature_342_residues
SIGCKKNGTWYVQYRIPGEKYPLREYTGIGEEGKTAARELDRQVKEQKAKGAVTKRVQRTGRIHLDQLAQAYLTERKLSG
KSAQWLEEMETLFNKKILPRLCFCPVDDLKYPDVIAMAAEAWPTVSLATRQRYLGYLKAAFNFGRKHELTATNPLDKWER
QKEPRLEFNFSVPDLLKLYDCAAPHLAWAIKVEWHIGTRPGRSELFALRWRHIDFESRIIKIYGTKTDGSFRAVPMLPHF
EAALKEKRKQALGEFVVDYKGRQVKKLQTAFEGAQRRANLGYHVRLYDIRHLFATTMLNGGADHAAVAKLLGHSAVSTTH
KWYYHVLPGETRRALAVKPDPF

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39457; Mature: 39326

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGCKKNGTWYVQYRIPGEKYPLREYTGIGEEGKTAARELDRQVKEQKAKGAVTKRVQR
CCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TGRIHLDQLAQAYLTERKLSGKSAQWLEEMETLFNKKILPRLCFCPVDDLKYPDVIAMAA
HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
EAWPTVSLATRQRYLGYLKAAFNFGRKHELTATNPLDKWERQKEPRLEFNFSVPDLLKLY
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHH
DCAAPHLAWAIKVEWHIGTRPGRSELFALRWRHIDFESRIIKIYGTKTDGSFRAVPMLPH
HCCCCCEEEEEEEEEEECCCCCHHHEEEEHEEECCCCCEEEEEEECCCCCCEEEECCCCH
FEAALKEKRKQALGEFVVDYKGRQVKKLQTAFEGAQRRANLGYHVRLYDIRHLFATTMLN
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHC
GGADHAAVAKLLGHSAVSTTHKWYYHVLPGETRRALAVKPDPF
CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCC
>Mature Secondary Structure 
SIGCKKNGTWYVQYRIPGEKYPLREYTGIGEEGKTAARELDRQVKEQKAKGAVTKRVQR
CCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TGRIHLDQLAQAYLTERKLSGKSAQWLEEMETLFNKKILPRLCFCPVDDLKYPDVIAMAA
HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
EAWPTVSLATRQRYLGYLKAAFNFGRKHELTATNPLDKWERQKEPRLEFNFSVPDLLKLY
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHH
DCAAPHLAWAIKVEWHIGTRPGRSELFALRWRHIDFESRIIKIYGTKTDGSFRAVPMLPH
HCCCCCEEEEEEEEEEECCCCCHHHEEEEHEEECCCCCEEEEEEECCCCCCEEEECCCCH
FEAALKEKRKQALGEFVVDYKGRQVKKLQTAFEGAQRRANLGYHVRLYDIRHLFATTMLN
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHC
GGADHAAVAKLLGHSAVSTTHKWYYHVLPGETRRALAVKPDPF
CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA