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The map label for this gene is ytqA [H]

Identifier: 220903451

GI number: 220903451

Start: 204767

End: 205810

Strand: Direct

Name: ytqA [H]

Synonym: Ddes_0165

Alternate gene names: 220903451

Gene position: 204767-205810 (Clockwise)

Preceding gene: 220903443

Following gene: 220903454

Centisome position: 7.13

GC content: 63.79

Gene sequence:

>1044_bases
ATGCTGCGTTGGCATACTCTGGCCGTGTATTTTCGTCGTAAATACGGTACACGGGTGCAAAAAATTCCACTTGACGCGGG
GGCGTCCTGCCCCAACCGGGACGGTTCGCTTTCACACCGGGGCTGCACGTTCTGCAATGCCTCCGGTTCAGGCTCCGGCT
TGGGCGTACGCGGCTTTTCGCTTGAGGAACAGTGGCGGGCATGGCTTGAAAAGTATCGTGCCACTGACGCCGACAGGGCC
TTTATGGCCTACCTTCAGTCCTATTCCAATACCTATGGTCCCCCGGAACGCCTGCAACTTCTGCTCCAACAGGTGGCGGC
CCTGCCGGGCTGCCTCGGCGTTGCCGTCGGCACGCGGCCCGACTGTCTCGGCCCGCACAAGCTGGATATGCTTGCCGCCT
GCCGGATAAATGCCAGTGGAAACGGCCCGGATGGTGTGCACCACTATACGCGAAATGCTCATGGAGACAATGGGTACAAA
AAGGGCGCCGGCGGCATGGAAAACGGCGGCCTTTCCGAGGTCTGGCTGGAGCTTGGGCTGCAAAGCGCTCACAATGCCAC
GCTCAGGCGCATCAACAGGGGGCATGATACCGCCTGCTCTGAAACCGCAGTGCGGCAGGCCGCCGAGCGCGGGCTTGCCG
TGTGCGGTCACCTCATGGCCGGACTGCCCGGCGAAGATGAGGCTGCCTTTCTGGAAAGCCTGGACTGGGCCCTTTCGCTG
CCGCTCAGCGGCCTCAAGCTGCACAACGTGTACGTGCCGCGCGGCACGTCTCTGGCCCGCCTGTACGAAGAGGGCGGGTA
TCACCCTCTGGCCCGCGACGAATATGTGGACCTGCTGTGTACGGCGCTGCCGCGCATACCTTCGGCCATGGTCATGCACC
GGGTGCAGAGTGATCCTGCCCCGGGTGAACTTCTGGCGCCGGCCTGGGCGGCGGAAAAGCGCGGCGTCATTACCGACCTG
CGGCGCGCCCTGACCGCCCGTGACCTCTGGCAGGGCAAGGCGGCAGATGTGCCGGACATGCGCCCGGAATGGTACGGTGG
TTGA

Upstream 100 bases:

>100_bases
TGTTCTGCTAAATCGGGCGTGAAGTCAAGATGGCTGGGGCGAGGTTCAAAATCTTTGTCCCGCCGGTTCTTGCCTTTTTC
TGCCTTTAGGGCTTGTAAAC

Downstream 100 bases:

>100_bases
GGGCGGCTTAAAAACGGCCCTCTAGGCCCGCTTCATGTCCTGGATAAGCTCCGCAAGTTTTTGCGCCTGCGCCGCAAGGC
CGGTCACGGCACTGGCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MLRWHTLAVYFRRKYGTRVQKIPLDAGASCPNRDGSLSHRGCTFCNASGSGSGLGVRGFSLEEQWRAWLEKYRATDADRA
FMAYLQSYSNTYGPPERLQLLLQQVAALPGCLGVAVGTRPDCLGPHKLDMLAACRINASGNGPDGVHHYTRNAHGDNGYK
KGAGGMENGGLSEVWLELGLQSAHNATLRRINRGHDTACSETAVRQAAERGLAVCGHLMAGLPGEDEAAFLESLDWALSL
PLSGLKLHNVYVPRGTSLARLYEEGGYHPLARDEYVDLLCTALPRIPSAMVMHRVQSDPAPGELLAPAWAAEKRGVITDL
RRALTARDLWQGKAADVPDMRPEWYGG

Sequences:

>Translated_347_residues
MLRWHTLAVYFRRKYGTRVQKIPLDAGASCPNRDGSLSHRGCTFCNASGSGSGLGVRGFSLEEQWRAWLEKYRATDADRA
FMAYLQSYSNTYGPPERLQLLLQQVAALPGCLGVAVGTRPDCLGPHKLDMLAACRINASGNGPDGVHHYTRNAHGDNGYK
KGAGGMENGGLSEVWLELGLQSAHNATLRRINRGHDTACSETAVRQAAERGLAVCGHLMAGLPGEDEAAFLESLDWALSL
PLSGLKLHNVYVPRGTSLARLYEEGGYHPLARDEYVDLLCTALPRIPSAMVMHRVQSDPAPGELLAPAWAAEKRGVITDL
RRALTARDLWQGKAADVPDMRPEWYGG
>Mature_347_residues
MLRWHTLAVYFRRKYGTRVQKIPLDAGASCPNRDGSLSHRGCTFCNASGSGSGLGVRGFSLEEQWRAWLEKYRATDADRA
FMAYLQSYSNTYGPPERLQLLLQQVAALPGCLGVAVGTRPDCLGPHKLDMLAACRINASGNGPDGVHHYTRNAHGDNGYK
KGAGGMENGGLSEVWLELGLQSAHNATLRRINRGHDTACSETAVRQAAERGLAVCGHLMAGLPGEDEAAFLESLDWALSL
PLSGLKLHNVYVPRGTSLARLYEEGGYHPLARDEYVDLLCTALPRIPSAMVMHRVQSDPAPGELLAPAWAAEKRGVITDL
RRALTARDLWQGKAADVPDMRPEWYGG

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=335, Percent_Identity=34.0298507462687, Blast_Score=187, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI133955098, Length=197, Percent_Identity=30.4568527918782, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37775; Mature: 37775

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRWHTLAVYFRRKYGTRVQKIPLDAGASCPNRDGSLSHRGCTFCNASGSGSGLGVRGFS
CCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEECCC
LEEQWRAWLEKYRATDADRAFMAYLQSYSNTYGPPERLQLLLQQVAALPGCLGVAVGTRP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHEEECCCCC
DCLGPHKLDMLAACRINASGNGPDGVHHYTRNAHGDNGYKKGAGGMENGGLSEVWLELGL
CCCCCCHHHHHHHEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
QSAHNATLRRINRGHDTACSETAVRQAAERGLAVCGHLMAGLPGEDEAAFLESLDWALSL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
PLSGLKLHNVYVPRGTSLARLYEEGGYHPLARDEYVDLLCTALPRIPSAMVMHRVQSDPA
CCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PGELLAPAWAAEKRGVITDLRRALTARDLWQGKAADVPDMRPEWYGG
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRWHTLAVYFRRKYGTRVQKIPLDAGASCPNRDGSLSHRGCTFCNASGSGSGLGVRGFS
CCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEECCC
LEEQWRAWLEKYRATDADRAFMAYLQSYSNTYGPPERLQLLLQQVAALPGCLGVAVGTRP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHEEECCCCC
DCLGPHKLDMLAACRINASGNGPDGVHHYTRNAHGDNGYKKGAGGMENGGLSEVWLELGL
CCCCCCHHHHHHHEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
QSAHNATLRRINRGHDTACSETAVRQAAERGLAVCGHLMAGLPGEDEAAFLESLDWALSL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
PLSGLKLHNVYVPRGTSLARLYEEGGYHPLARDEYVDLLCTALPRIPSAMVMHRVQSDPA
CCCCEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PGELLAPAWAAEKRGVITDLRRALTARDLWQGKAADVPDMRPEWYGG
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]