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The map label for this gene is dcrA [H]

Identifier: 220903420

GI number: 220903420

Start: 171294

End: 173720

Strand: Reverse

Name: dcrA [H]

Synonym: Ddes_0134

Alternate gene names: 220903420

Gene position: 173720-171294 (Counterclockwise)

Preceding gene: 220903421

Following gene: 220903419

Centisome position: 6.05

GC content: 58.38

Gene sequence:

>2427_bases
ATGACTATTCGTGCAAAATTTTTGCTGACCTTTTTTGCTGCCATTATTCTGGGCATCGGCAGCACCCTGCTGATTGTCAC
CGGGAAAATGGACACCATGAATGAGCGCAGCACACAAGCGTATATGGAGCACGCGCTCTCAAGCACCAATAACTATATCG
CTCTCTTCTTCAAGCAGGCCCAGGAAAGCGCAACCATGCTGGCTTCCACGCCAGCCATACGCGAAGCTTTCGGCCACCTT
CCTCTTTTCACAGACAACAGCGAACCGCAGCAGGTTGCCAGGCCGGCCATGACACCGCAGGCCCGGACGGTGGACGAAAT
ATTCCAGCTCGTCAAAGACAGCCACGCCAACTACAGTAGTATTACCTTTGGCGCTGAAAACGGCGGTTTTCTCGAATATC
CGCTGGCATCCTGGCCCGCAGGGCATGACCCGAGAACAAAAAAATGGTACCGCCAGCAGATGGAAAGCTCCCGCGCCACC
AACATCAGTTCGGCCTATACAACGGCGCAGGGCGTCGCTGCCTGCGCCGTTACGGCAAAGGTTTCCGGCGCGGACGGCAG
GCCCCTGGGCGTCATTGATATCGACATCACCCTTTCCGCCCTTGTCGTAATGGTGGAAGGAATAAAAATCGGCCAGACAG
GTTCCATCATACTGCTCGAAGACAGCGGCATGGTTCTGGCCGCCCCCCAGTACAAGGCCTGGGTCAACCGCAATATCAGC
GAGTGCGGGGTGCCCGCCCTGCAGGACCTGCTTGCCGCCGGGGGAACAGGCACGCTTGCGCTGGACGGTGTTGAAAAACG
TATTGTCGTGTACAAGGGCTTTCAGGGCTGGCGCATGATCGCCCTTATGAATGAAAGTGAAGTCAGTGCGGACATGAACG
CGGCCCTCAAGCAGGTACTGCTCGCCGGGGCGGCCATTACCGCGGTTCTGCTTCTGCTGGCCCTGTGGATTGTGCAGAGC
ATACGCAAACCTCTTCATCAGATGGTGCAGTGCACCACGTCCATATCCAACGGTGACCTTGACTGCCTGCCGTCGGCAAA
AAGATTTTCCGCCGAGCTTTTGCAGCTGCACACCGGCCTTTCCCGCATAACAGATACCTGCAAGAACATGCGAACCCAGG
TAACGGCTACCGTCGGCAGCGTGGCCGACGGCTATCTGCGCAGCAGCATCAACGAAACGGAATTCAGGGGCGACTTTAAA
AAAATCGTCGAATCCATCAATGGCCTGGCGGGCAGCATGCTGGCAGTTATCGACAAGATACCTTCTCCCATCATGATCCG
CGATGCGCAGAGAAAGATACGGTTCCTGAATGAAGCCGCGATGTTTGGCGGCAAAACACCCGACAGCATGACCGGAACGG
CCTGCTCAGGCCATTTCAGGGCCGATGCCTGCGCCGGAGGCTGCGCTGCGGACCAGTGCTTTGCCAGCAGCCGCAAGGAA
ACCACAAGCACCGTGTCACATCCTTCCGACGGCACGGCCATCGACATGTTCTATACGGCCCTGCCCTACGGTTCCGACGC
CGTACTGGCGCTCATGACAGACCAGACCCAGATGCTGCAGGCCCAGCGACAGGTGATGGAGGTGGCCCGCGAGGTGGAAG
AAGTGGGCACGAAGCTGTCCGCAGCATCCCACGAACTGGCGCACATCATAGCCCTGTCGGATCAGGGTGCGGAACGGCAG
GCCATGCGCGTGGGCGAAACCGCCAGCGCTATGGAAGAAATGAATTCCACCGTGCTTGAGGTGGCACGCAATGCCGAGCA
GGCAGCCAATATGGCCATGGGTACACGGGAAAAAGCGCAAGAAGGCGCGGAAATCGTAAGAAAATCCGTCAACTGCATCC
AGACGGTGCAAAGCCAGTCCTTGCAGCTTAAAAACGACATGAACACCCTGAACAGAAACGCGGCCGACATCAGCCAGATC
ATGGGCGTCATATCCGACATCGCAGACCAGACCAACCTGCTGGCCCTCAATGCCGCCATTGAGGCCGCACGGGCGGGTGA
CGCAGGGCGCGGCTTTGCCGTGGTGGCTGACGAGGTGCGCAAGCTGGCCGAAAAAACCATGTCCTCTACCACCGAGGTCG
CCAGGGCCATTGCCGCCATCCAGAGCAGCGCCGGGCAGAGCGTCAATTCTGTGGATGCTTCCACAAGGTCCATTGAAGAA
GCCACGACCTTTGTCACCCTGTCCGGCACGGCGCTGGAAGAAATCGTCAGCATGGTGGATACCACCGCCGACCAGGTGCG
CGCCATCGCCACGGCCAGCGAAGAGCAGTCCGCCACCAGCGACGAGATCAACCGGTCAGTCAACGAGATCAATGAAATCG
GTATCAAGACGGCCCAAGGCATGCGCGACGCCAATACGGCAGTCTCCGGCCTGAAGCAGCTCTCGCAGACGCTGGATGCC
CTGCTCAAAACCATGAAGCTTTCCTGA

Upstream 100 bases:

>100_bases
CCTGGCCTCTGTTGTCAGGCTCTTTCGGTATGGAAAACGCTGCACAGCTCTGAGGCTTCTTGCGAACGCCCCGAGCCACG
CACAACGACAGGACGTTGCC

Downstream 100 bases:

>100_bases
CCGTACCCCCCGGCGCTGCGGGCAAAACTCCTGCCCGCAGCGCCGCATCCAGGTCCCGGCAGGCAGATGCGCCGGCAGAT
GCCGCAGGAAACGCCGCCAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 808; Mature: 807

Protein sequence:

>808_residues
MTIRAKFLLTFFAAIILGIGSTLLIVTGKMDTMNERSTQAYMEHALSSTNNYIALFFKQAQESATMLASTPAIREAFGHL
PLFTDNSEPQQVARPAMTPQARTVDEIFQLVKDSHANYSSITFGAENGGFLEYPLASWPAGHDPRTKKWYRQQMESSRAT
NISSAYTTAQGVAACAVTAKVSGADGRPLGVIDIDITLSALVVMVEGIKIGQTGSIILLEDSGMVLAAPQYKAWVNRNIS
ECGVPALQDLLAAGGTGTLALDGVEKRIVVYKGFQGWRMIALMNESEVSADMNAALKQVLLAGAAITAVLLLLALWIVQS
IRKPLHQMVQCTTSISNGDLDCLPSAKRFSAELLQLHTGLSRITDTCKNMRTQVTATVGSVADGYLRSSINETEFRGDFK
KIVESINGLAGSMLAVIDKIPSPIMIRDAQRKIRFLNEAAMFGGKTPDSMTGTACSGHFRADACAGGCAADQCFASSRKE
TTSTVSHPSDGTAIDMFYTALPYGSDAVLALMTDQTQMLQAQRQVMEVAREVEEVGTKLSAASHELAHIIALSDQGAERQ
AMRVGETASAMEEMNSTVLEVARNAEQAANMAMGTREKAQEGAEIVRKSVNCIQTVQSQSLQLKNDMNTLNRNAADISQI
MGVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSSTTEVARAIAAIQSSAGQSVNSVDASTRSIEE
ATTFVTLSGTALEEIVSMVDTTADQVRAIATASEEQSATSDEINRSVNEINEIGIKTAQGMRDANTAVSGLKQLSQTLDA
LLKTMKLS

Sequences:

>Translated_808_residues
MTIRAKFLLTFFAAIILGIGSTLLIVTGKMDTMNERSTQAYMEHALSSTNNYIALFFKQAQESATMLASTPAIREAFGHL
PLFTDNSEPQQVARPAMTPQARTVDEIFQLVKDSHANYSSITFGAENGGFLEYPLASWPAGHDPRTKKWYRQQMESSRAT
NISSAYTTAQGVAACAVTAKVSGADGRPLGVIDIDITLSALVVMVEGIKIGQTGSIILLEDSGMVLAAPQYKAWVNRNIS
ECGVPALQDLLAAGGTGTLALDGVEKRIVVYKGFQGWRMIALMNESEVSADMNAALKQVLLAGAAITAVLLLLALWIVQS
IRKPLHQMVQCTTSISNGDLDCLPSAKRFSAELLQLHTGLSRITDTCKNMRTQVTATVGSVADGYLRSSINETEFRGDFK
KIVESINGLAGSMLAVIDKIPSPIMIRDAQRKIRFLNEAAMFGGKTPDSMTGTACSGHFRADACAGGCAADQCFASSRKE
TTSTVSHPSDGTAIDMFYTALPYGSDAVLALMTDQTQMLQAQRQVMEVAREVEEVGTKLSAASHELAHIIALSDQGAERQ
AMRVGETASAMEEMNSTVLEVARNAEQAANMAMGTREKAQEGAEIVRKSVNCIQTVQSQSLQLKNDMNTLNRNAADISQI
MGVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSSTTEVARAIAAIQSSAGQSVNSVDASTRSIEE
ATTFVTLSGTALEEIVSMVDTTADQVRAIATASEEQSATSDEINRSVNEINEIGIKTAQGMRDANTAVSGLKQLSQTLDA
LLKTMKLS
>Mature_807_residues
TIRAKFLLTFFAAIILGIGSTLLIVTGKMDTMNERSTQAYMEHALSSTNNYIALFFKQAQESATMLASTPAIREAFGHLP
LFTDNSEPQQVARPAMTPQARTVDEIFQLVKDSHANYSSITFGAENGGFLEYPLASWPAGHDPRTKKWYRQQMESSRATN
ISSAYTTAQGVAACAVTAKVSGADGRPLGVIDIDITLSALVVMVEGIKIGQTGSIILLEDSGMVLAAPQYKAWVNRNISE
CGVPALQDLLAAGGTGTLALDGVEKRIVVYKGFQGWRMIALMNESEVSADMNAALKQVLLAGAAITAVLLLLALWIVQSI
RKPLHQMVQCTTSISNGDLDCLPSAKRFSAELLQLHTGLSRITDTCKNMRTQVTATVGSVADGYLRSSINETEFRGDFKK
IVESINGLAGSMLAVIDKIPSPIMIRDAQRKIRFLNEAAMFGGKTPDSMTGTACSGHFRADACAGGCAADQCFASSRKET
TSTVSHPSDGTAIDMFYTALPYGSDAVLALMTDQTQMLQAQRQVMEVAREVEEVGTKLSAASHELAHIIALSDQGAERQA
MRVGETASAMEEMNSTVLEVARNAEQAANMAMGTREKAQEGAEIVRKSVNCIQTVQSQSLQLKNDMNTLNRNAADISQIM
GVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSSTTEVARAIAAIQSSAGQSVNSVDASTRSIEEA
TTFVTLSGTALEEIVSMVDTTADQVRAIATASEEQSATSDEINRSVNEINEIGIKTAQGMRDANTAVSGLKQLSQTLDAL
LKTMKLS

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=216, Percent_Identity=40.7407407407407, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI1788195, Length=252, Percent_Identity=34.5238095238095, Blast_Score=112, Evalue=1e-25,
Organism=Escherichia coli, GI1787690, Length=250, Percent_Identity=31.6, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1788194, Length=244, Percent_Identity=33.6065573770492, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI1789453, Length=216, Percent_Identity=30.5555555555556, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 86285; Mature: 86154

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00142 ZINC_PROTEASE ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRAKFLLTFFAAIILGIGSTLLIVTGKMDTMNERSTQAYMEHALSSTNNYIALFFKQA
CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHH
QESATMLASTPAIREAFGHLPLFTDNSEPQQVARPAMTPQARTVDEIFQLVKDSHANYSS
HHHHHHHHCCHHHHHHHCCCCEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCE
ITFGAENGGFLEYPLASWPAGHDPRTKKWYRQQMESSRATNISSAYTTAQGVAACAVTAK
EEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEE
VSGADGRPLGVIDIDITLSALVVMVEGIKIGQTGSIILLEDSGMVLAAPQYKAWVNRNIS
ECCCCCCEEEEEEEHHHHHHHHHHHHCCEECCCCCEEEEECCCCEEECCCHHHHHCCCHH
ECGVPALQDLLAAGGTGTLALDGVEKRIVVYKGFQGWRMIALMNESEVSADMNAALKQVL
HCCCHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHH
LAGAAITAVLLLLALWIVQSIRKPLHQMVQCTTSISNGDLDCLPSAKRFSAELLQLHTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
SRITDTCKNMRTQVTATVGSVADGYLRSSINETEFRGDFKKIVESINGLAGSMLAVIDKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSPIMIRDAQRKIRFLNEAAMFGGKTPDSMTGTACSGHFRADACAGGCAADQCFASSRKE
CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHH
TTSTVSHPSDGTAIDMFYTALPYGSDAVLALMTDQTQMLQAQRQVMEVAREVEEVGTKLS
HHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
AASHELAHIIALSDQGAERQAMRVGETASAMEEMNSTVLEVARNAEQAANMAMGTREKAQ
HHHHHHHEEEEECCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EGAEIVRKSVNCIQTVQSQSLQLKNDMNTLNRNAADISQIMGVISDIADQTNLLALNAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHHH
EAARAGDAGRGFAVVADEVRKLAEKTMSSTTEVARAIAAIQSSAGQSVNSVDASTRSIEE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ATTFVTLSGTALEEIVSMVDTTADQVRAIATASEEQSATSDEINRSVNEINEIGIKTAQG
HHEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCHHHCC
MRDANTAVSGLKQLSQTLDALLKTMKLS
CCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIRAKFLLTFFAAIILGIGSTLLIVTGKMDTMNERSTQAYMEHALSSTNNYIALFFKQA
CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHH
QESATMLASTPAIREAFGHLPLFTDNSEPQQVARPAMTPQARTVDEIFQLVKDSHANYSS
HHHHHHHHCCHHHHHHHCCCCEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCE
ITFGAENGGFLEYPLASWPAGHDPRTKKWYRQQMESSRATNISSAYTTAQGVAACAVTAK
EEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEE
VSGADGRPLGVIDIDITLSALVVMVEGIKIGQTGSIILLEDSGMVLAAPQYKAWVNRNIS
ECCCCCCEEEEEEEHHHHHHHHHHHHCCEECCCCCEEEEECCCCEEECCCHHHHHCCCHH
ECGVPALQDLLAAGGTGTLALDGVEKRIVVYKGFQGWRMIALMNESEVSADMNAALKQVL
HCCCHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHH
LAGAAITAVLLLLALWIVQSIRKPLHQMVQCTTSISNGDLDCLPSAKRFSAELLQLHTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
SRITDTCKNMRTQVTATVGSVADGYLRSSINETEFRGDFKKIVESINGLAGSMLAVIDKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSPIMIRDAQRKIRFLNEAAMFGGKTPDSMTGTACSGHFRADACAGGCAADQCFASSRKE
CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHH
TTSTVSHPSDGTAIDMFYTALPYGSDAVLALMTDQTQMLQAQRQVMEVAREVEEVGTKLS
HHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
AASHELAHIIALSDQGAERQAMRVGETASAMEEMNSTVLEVARNAEQAANMAMGTREKAQ
HHHHHHHEEEEECCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
EGAEIVRKSVNCIQTVQSQSLQLKNDMNTLNRNAADISQIMGVISDIADQTNLLALNAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHHH
EAARAGDAGRGFAVVADEVRKLAEKTMSSTTEVARAIAAIQSSAGQSVNSVDASTRSIEE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ATTFVTLSGTALEEIVSMVDTTADQVRAIATASEEQSATSDEINRSVNEINEIGIKTAQG
HHEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCHHHCC
MRDANTAVSGLKQLSQTLDALLKTMKLS
CCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]