| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220903352
Identifier: 220903352
GI number: 220903352
Start: 86356
End: 86835
Strand: Direct
Name: 220903352
Synonym: Ddes_0066
Alternate gene names: NA
Gene position: 86356-86835 (Clockwise)
Preceding gene: 220903351
Following gene: 220903353
Centisome position: 3.01
GC content: 60.0
Gene sequence:
>480_bases ATGTCCCGTGATATCATCAATGCCGTTCAGGCCCCTTACCGCCACTCCTGGAGCCTGCTCACCCAGTTTATTGATGTCTG CCCCGAGAATATCTGGAATGGAACACGCGGCGGCTGGCCTGTATGGCAGCAGGTGGCCCACACCATTGCCGTGCTGAATT TTTTTACGCTGGGCGAAAAGGATGCTCCCCTGCCTGCGCCCTGCGATCAGGCCACGCTTATGCTCAAGGTGCAGGGGGCC TGCGCTGTCGGCAAGGATGCCATGCGTGACTATGCAGAGGCTGTGCGCATCTGTGTTGATGCCTGGCTTGACGGGCTTTC AGACGCTGATCTCGCCCGGCTGCATGCCGTGCTGAGCCAAAAAATCGGGATGGACGTCACCTACGGGGCGGCCGTGGCCA TGCTTGCCAGCCATACCTGCTACCATATCGGCTCCTGTGATGCCGCCCTGCGAGATAGCGGCCTGCCCGGGGTATTTTAG
Upstream 100 bases:
>100_bases GGCTTTGCTATGCTGGTTCTGACCGGCGCGCCCGGCGGCCCTGCCGCCGTAGCGGACCGACGCGCCGGGGCATCTCCACC GCAACCGTAAGGAGACACTC
Downstream 100 bases:
>100_bases GCATTGTTTTTAGAATATTTTTACGGTGAAAAAGCTCCGGCGGCTGCGCGAGCGCACGTTGTTTACGCCGCCAAGCGCCA GAGCAGACGCGCCTTGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSRDIINAVQAPYRHSWSLLTQFIDVCPENIWNGTRGGWPVWQQVAHTIAVLNFFTLGEKDAPLPAPCDQATLMLKVQGA CAVGKDAMRDYAEAVRICVDAWLDGLSDADLARLHAVLSQKIGMDVTYGAAVAMLASHTCYHIGSCDAALRDSGLPGVF
Sequences:
>Translated_159_residues MSRDIINAVQAPYRHSWSLLTQFIDVCPENIWNGTRGGWPVWQQVAHTIAVLNFFTLGEKDAPLPAPCDQATLMLKVQGA CAVGKDAMRDYAEAVRICVDAWLDGLSDADLARLHAVLSQKIGMDVTYGAAVAMLASHTCYHIGSCDAALRDSGLPGVF >Mature_158_residues SRDIINAVQAPYRHSWSLLTQFIDVCPENIWNGTRGGWPVWQQVAHTIAVLNFFTLGEKDAPLPAPCDQATLMLKVQGAC AVGKDAMRDYAEAVRICVDAWLDGLSDADLARLHAVLSQKIGMDVTYGAAVAMLASHTCYHIGSCDAALRDSGLPGVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17218; Mature: 17087
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDIINAVQAPYRHSWSLLTQFIDVCPENIWNGTRGGWPVWQQVAHTIAVLNFFTLGEK CCHHHHHHHHCCCCHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC DAPLPAPCDQATLMLKVQGACAVGKDAMRDYAEAVRICVDAWLDGLSDADLARLHAVLSQ CCCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KIGMDVTYGAAVAMLASHTCYHIGSCDAALRDSGLPGVF HHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC >Mature Secondary Structure SRDIINAVQAPYRHSWSLLTQFIDVCPENIWNGTRGGWPVWQQVAHTIAVLNFFTLGEK CHHHHHHHHCCCCHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC DAPLPAPCDQATLMLKVQGACAVGKDAMRDYAEAVRICVDAWLDGLSDADLARLHAVLSQ CCCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KIGMDVTYGAAVAMLASHTCYHIGSCDAALRDSGLPGVF HHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA