| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903343
Identifier: 220903343
GI number: 220903343
Start: 74700
End: 75809
Strand: Reverse
Name: 220903343
Synonym: Ddes_0057
Alternate gene names: NA
Gene position: 75809-74700 (Counterclockwise)
Preceding gene: 220903344
Following gene: 220903342
Centisome position: 2.64
GC content: 64.77
Gene sequence:
>1110_bases ATGCAGCCGACTGATTTTATTCCCGCCCCCTACGTGCAGGACGCCCTCCGCATGGTGGAGGCCCTGAAGGGCATGGACCG CATCGTGGTGGCAGGCCATGTCAATCCCGATGGCGACGCCGCCGGATCCGTAGCTGCCGCCGGGCATATCCTGCGGGCCA TGGGCAAGGAGTTCATGCTTTACGCCGCCCCCGGCCTGCCCCGCTACCTGGGTTTTTTTCCCATGCCCGCAGTGGTGCAC ACAAGCCTCGCTCATACCCCCTTCACGCCCCAGTGCGCGCTTTTGCTGGATTGCGGCGAACCCGAACGCCTGGGCTCGGA GCTGGCGGCCCTGCTGCCGCAACTGGATACCGTAAATATTGACCATCACCTCGGCGGCGACGGCATGGGCAGCCTGGGTA ACTGGGTGGTCACCGAAGCGGCGGCCACAGCCCAGCTCATGGCCTATGTGGCTATGGCCGCAGACCTGCCCCTTACGGGC GATCTGGGGCTTTCCGTTGCCCTTGGGCTGCTGACGGATACCGGAGGCTTCTGCCACGGCAACACCAGTGCCGATGTGCT GGCCCTGGCCTCGCACCTGGTTGCCAACGGCTGCCACCTGCACTGGCTGCGGGAAAAAATGGATAACGACTGGAGCCTGG GCCGCTGGCGGCTCTGGGGCCAGCTTATGGAACGCGCTGTTGTGGAGCACCACGGGCAGATCGGCTTTTGCCCTGTGAGC CTGAAAGACCTTGGCCGCTGCCAGGCCCTCAAGGAAGACCTCGAAGGCTTTGTTGAGCAGCTCAGACGGCTGCGCGGCGT CAAGGTGGCAGCCCTGTTGCGCGAAGAGTCCCCCAGGCTCTGCAAGTTCAGCCTGCGGTCCTACGGTTCCATCGACGTAC GGGCCATGGCGGCCGATATGGGTGGCGGCGGGCACTTTAATGCCGCCGGGGGAACCCTGCGCCTGCCGCTGAAAAAAGCC GGTGAAGAACTCCTGCGGCGTATCGCCCTCCGCCTGGACGGACGTGCGCCGGAGATTCCGGAAGCACCGGGAACGGGGGA AGAACGGCACACGCCGGACGATGAAACCGCAGCCGGAAACAACGACCAGAGCCAGGTAACGACCTCTTGA
Upstream 100 bases:
>100_bases TCCAACAGCGAAGGACACCTGCGTAGCCGCATGGACAAATGCGCGCTCATGATGGAAGCCGTTTGCCCGGAAGAAATGGT GGACAGTCAGGTGGAAATAT
Downstream 100 bases:
>100_bases AACCGCCCCTGGCAGCGCAGGCTGACACCATATTTGGCTGTCCTTTGTCCCGATCCCCAGGCGATTCTGCTGGTGGTATT GCGCGGCGTGAAGAACCATC
Product: phosphoesterase RecJ domain-containing protein
Products: NA
Alternate protein names: Mgp1; ORF-1 protein [H]
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MQPTDFIPAPYVQDALRMVEALKGMDRIVVAGHVNPDGDAAGSVAAAGHILRAMGKEFMLYAAPGLPRYLGFFPMPAVVH TSLAHTPFTPQCALLLDCGEPERLGSELAALLPQLDTVNIDHHLGGDGMGSLGNWVVTEAAATAQLMAYVAMAADLPLTG DLGLSVALGLLTDTGGFCHGNTSADVLALASHLVANGCHLHWLREKMDNDWSLGRWRLWGQLMERAVVEHHGQIGFCPVS LKDLGRCQALKEDLEGFVEQLRRLRGVKVAALLREESPRLCKFSLRSYGSIDVRAMAADMGGGGHFNAAGGTLRLPLKKA GEELLRRIALRLDGRAPEIPEAPGTGEERHTPDDETAAGNNDQSQVTTS
Sequences:
>Translated_369_residues MQPTDFIPAPYVQDALRMVEALKGMDRIVVAGHVNPDGDAAGSVAAAGHILRAMGKEFMLYAAPGLPRYLGFFPMPAVVH TSLAHTPFTPQCALLLDCGEPERLGSELAALLPQLDTVNIDHHLGGDGMGSLGNWVVTEAAATAQLMAYVAMAADLPLTG DLGLSVALGLLTDTGGFCHGNTSADVLALASHLVANGCHLHWLREKMDNDWSLGRWRLWGQLMERAVVEHHGQIGFCPVS LKDLGRCQALKEDLEGFVEQLRRLRGVKVAALLREESPRLCKFSLRSYGSIDVRAMAADMGGGGHFNAAGGTLRLPLKKA GEELLRRIALRLDGRAPEIPEAPGTGEERHTPDDETAAGNNDQSQVTTS >Mature_369_residues MQPTDFIPAPYVQDALRMVEALKGMDRIVVAGHVNPDGDAAGSVAAAGHILRAMGKEFMLYAAPGLPRYLGFFPMPAVVH TSLAHTPFTPQCALLLDCGEPERLGSELAALLPQLDTVNIDHHLGGDGMGSLGNWVVTEAAATAQLMAYVAMAADLPLTG DLGLSVALGLLTDTGGFCHGNTSADVLALASHLVANGCHLHWLREKMDNDWSLGRWRLWGQLMERAVVEHHGQIGFCPVS LKDLGRCQALKEDLEGFVEQLRRLRGVKVAALLREESPRLCKFSLRSYGSIDVRAMAADMGGGGHFNAAGGTLRLPLKKA GEELLRRIALRLDGRAPEIPEAPGTGEERHTPDDETAAGNNDQSQVTTS
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mgp1/MG371 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003156 - InterPro: IPR001667 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]
EC number: NA
Molecular weight: Translated: 39474; Mature: 39474
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPTDFIPAPYVQDALRMVEALKGMDRIVVAGHVNPDGDAAGSVAAAGHILRAMGKEFML CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEE YAAPGLPRYLGFFPMPAVVHTSLAHTPFTPQCALLLDCGEPERLGSELAALLPQLDTVNI EECCCCHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEECC DHHLGGDGMGSLGNWVVTEAAATAQLMAYVAMAADLPLTGDLGLSVALGLLTDTGGFCHG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCC NTSADVLALASHLVANGCHLHWLREKMDNDWSLGRWRLWGQLMERAVVEHHGQIGFCPVS CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC LKDLGRCQALKEDLEGFVEQLRRLRGVKVAALLREESPRLCKFSLRSYGSIDVRAMAADM HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECC GGGGHFNAAGGTLRLPLKKAGEELLRRIALRLDGRAPEIPEAPGTGEERHTPDDETAAGN CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDQSQVTTS CCCCCCCCC >Mature Secondary Structure MQPTDFIPAPYVQDALRMVEALKGMDRIVVAGHVNPDGDAAGSVAAAGHILRAMGKEFML CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEE YAAPGLPRYLGFFPMPAVVHTSLAHTPFTPQCALLLDCGEPERLGSELAALLPQLDTVNI EECCCCHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEECC DHHLGGDGMGSLGNWVVTEAAATAQLMAYVAMAADLPLTGDLGLSVALGLLTDTGGFCHG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCC NTSADVLALASHLVANGCHLHWLREKMDNDWSLGRWRLWGQLMERAVVEHHGQIGFCPVS CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC LKDLGRCQALKEDLEGFVEQLRRLRGVKVAALLREESPRLCKFSLRSYGSIDVRAMAADM HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECC GGGGHFNAAGGTLRLPLKKAGEELLRRIALRLDGRAPEIPEAPGTGEERHTPDDETAAGN CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDQSQVTTS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7569993; 2583522 [H]