| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903338
Identifier: 220903338
GI number: 220903338
Start: 68695
End: 69171
Strand: Reverse
Name: 220903338
Synonym: Ddes_0052
Alternate gene names: NA
Gene position: 69171-68695 (Counterclockwise)
Preceding gene: 220903339
Following gene: 220903337
Centisome position: 2.41
GC content: 62.26
Gene sequence:
>477_bases ATGAACGCGCCTTTACTCTGGTTTATTCTGGGGGCGGCCTTTTTTGTGGCCGAACTCATGACCCCGGCCATGGTCCTGCT CTTTTTCGGTGTGGGCGCCTGGGTCGCGGCCCTGACTGCCCTTATGGGCCTGGGCCTTGCATGGCAGCTCATCACCTTCA TCTGCCTTTCCCTGCTTACCCTGCTCTTTTTGCGCCGCCGCCTGCGGGCGGTCTTCGGCGGGCGCGCCCACCGCGTACCT GCCGGAAACTGCAACAGCCACGGTGAAGAATCCTGCTCCCCGCATCCCCTTACGGGCAGGCAGGGCGTCGTCAGCAAGGC CGTTCACCCCGGAAAAATCGGAGAAGTAAGCATTGACGGCAGCTTCTGGCGGGCCACAGCCCATGAAAAACTGGCTGAAG GCAGCCCGGTGCGCGTACAGGGGGCAGACCCCGGCGATGCACTGGTTCTGCATGTAAGCCCGGCAACAAAATCCTGA
Upstream 100 bases:
>100_bases GGCAGGGGCCTTTCCCCACGGTTAAGGCCCCCGCCGTGCAAGACAAGAAAAACAGCGGCACACCGCCCCGGCGCACACGG CTGGCCGCACGGAACATACT
Downstream 100 bases:
>100_bases ACCGCAAACACGCGCCTGTAGGCGCCTGCCCGCAACAGCAAGCCCCAGGGCAAAGGCCGTGGCCCGCAGGAACCCGGATT ACGGTTCGGCATACGCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MNAPLLWFILGAAFFVAELMTPAMVLLFFGVGAWVAALTALMGLGLAWQLITFICLSLLTLLFLRRRLRAVFGGRAHRVP AGNCNSHGEESCSPHPLTGRQGVVSKAVHPGKIGEVSIDGSFWRATAHEKLAEGSPVRVQGADPGDALVLHVSPATKS
Sequences:
>Translated_158_residues MNAPLLWFILGAAFFVAELMTPAMVLLFFGVGAWVAALTALMGLGLAWQLITFICLSLLTLLFLRRRLRAVFGGRAHRVP AGNCNSHGEESCSPHPLTGRQGVVSKAVHPGKIGEVSIDGSFWRATAHEKLAEGSPVRVQGADPGDALVLHVSPATKS >Mature_158_residues MNAPLLWFILGAAFFVAELMTPAMVLLFFGVGAWVAALTALMGLGLAWQLITFICLSLLTLLFLRRRLRAVFGGRAHRVP AGNCNSHGEESCSPHPLTGRQGVVSKAVHPGKIGEVSIDGSFWRATAHEKLAEGSPVRVQGADPGDALVLHVSPATKS
Specific function: Unknown
COG id: COG1585
COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16797; Mature: 16797
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPLLWFILGAAFFVAELMTPAMVLLFFGVGAWVAALTALMGLGLAWQLITFICLSLLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LLFLRRRLRAVFGGRAHRVPAGNCNSHGEESCSPHPLTGRQGVVSKAVHPGKIGEVSIDG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECC SFWRATAHEKLAEGSPVRVQGADPGDALVLHVSPATKS HHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCC >Mature Secondary Structure MNAPLLWFILGAAFFVAELMTPAMVLLFFGVGAWVAALTALMGLGLAWQLITFICLSLLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LLFLRRRLRAVFGGRAHRVPAGNCNSHGEESCSPHPLTGRQGVVSKAVHPGKIGEVSIDG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECC SFWRATAHEKLAEGSPVRVQGADPGDALVLHVSPATKS HHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA