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The map label for this gene is glxA [H]

Identifier: 220903335

GI number: 220903335

Start: 65454

End: 66422

Strand: Reverse

Name: glxA [H]

Synonym: Ddes_0049

Alternate gene names: 220903335

Gene position: 66422-65454 (Counterclockwise)

Preceding gene: 220903337

Following gene: 220903332

Centisome position: 2.31

GC content: 58.31

Gene sequence:

>969_bases
ATGAACATGCATAACATCGGTATCCTGGCATTGCCCGGTTTTGTGCCTTTTGACTGCTCCATCCCCTTTCAGCTTTTTTC
CCTGGCTTGTGGAAAAAGCGGCGAACATGCCTACGACCTGAATTTTATCGGCGATACAGGACGTGTTTCATCCGGCCAGT
TCAGCATTGAGGGCGCGTTGCCCCTGGCCGCCATGCAGGAAATGAATACGGTTATTGTACCAGGCGTCACGCCGTCTTTC
GGCGTATGTTCCCAAGGGGTTCTGGACGCATTGCGACAGGCCCGGGATGCCGGAATCCGCATGGCCTCCATATGCACCGG
AGCCTGCATACTGGCTGCCGCCGGGCTGCTGGACGGCATGCAGGCCACCACGCACTGGTCTGTTGCCGAAGAACTGGCCG
CAAGGTATCCGCAAATAGATGTGGAGGCCGACATCCTGTTTGTGGATAACGGCCAGGTGCTTACCTCCGCAGGCCTTGCC
TCGGGCATTGACCTTTGCCTGCACATGATCCGTCAGGACCTGGGGGCTGCCGCCGCCGAAGAGCTTGCCGCATTTTTTGT
GGTCCCTATGGAACGCGACGGCGGGCAGAGGCAGTTTATACGTCGCACCGGGCCGGAATCAGGCGGCAACCTCGCCCCCC
TGCTGTTGTGGATGCAGGAAAACATGCACAAAAACCTTACCCTGAGCAGCATATGCAGGCAGGCCCACATGAGTTCCCGT
ACCCTGAACAGAAGATTTCTTGAACAGGTGGGCGCGCCGCCCATGTTATGGCTGACCAGAGCGCGTGTGCGCCGTTCTCA
GGCCCTGCTGGAATCAAGCTCCATGTCGGTGGAAGAAATAGCCGCCAGCACCGGCTTTGGTTCGGCAGCCTCGCTGAGGG
ATCACTTCCGCCGCACGGTGGGTACAAGCCCCACCGCCTGGCGTAAGACATTCAAGCGTTATTATACCGGTCAGGACATG
CGGGAATAA

Upstream 100 bases:

>100_bases
CGGCGGGATCCTGCCATACAGGGTCCGCTGTATTGGCGCGGAGGCTCTTTGGGGGTAATAAAAGCGTACCGCCAACCTTT
TTCCGCCCGGTGAACCAGAA

Downstream 100 bases:

>100_bases
CCCGCAACAGCCAGAGCAGCCATGCCGGGGAGTGCAGGCTTTCTGCCACGGATGCTGCATGCGGTGCGCCCGGAAACAGC
ATGCAAAAAACGGCCCCCCT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MNMHNIGILALPGFVPFDCSIPFQLFSLACGKSGEHAYDLNFIGDTGRVSSGQFSIEGALPLAAMQEMNTVIVPGVTPSF
GVCSQGVLDALRQARDAGIRMASICTGACILAAAGLLDGMQATTHWSVAEELAARYPQIDVEADILFVDNGQVLTSAGLA
SGIDLCLHMIRQDLGAAAAEELAAFFVVPMERDGGQRQFIRRTGPESGGNLAPLLLWMQENMHKNLTLSSICRQAHMSSR
TLNRRFLEQVGAPPMLWLTRARVRRSQALLESSSMSVEEIAASTGFGSAASLRDHFRRTVGTSPTAWRKTFKRYYTGQDM
RE

Sequences:

>Translated_322_residues
MNMHNIGILALPGFVPFDCSIPFQLFSLACGKSGEHAYDLNFIGDTGRVSSGQFSIEGALPLAAMQEMNTVIVPGVTPSF
GVCSQGVLDALRQARDAGIRMASICTGACILAAAGLLDGMQATTHWSVAEELAARYPQIDVEADILFVDNGQVLTSAGLA
SGIDLCLHMIRQDLGAAAAEELAAFFVVPMERDGGQRQFIRRTGPESGGNLAPLLLWMQENMHKNLTLSSICRQAHMSSR
TLNRRFLEQVGAPPMLWLTRARVRRSQALLESSSMSVEEIAASTGFGSAASLRDHFRRTVGTSPTAWRKTFKRYYTGQDM
RE
>Mature_322_residues
MNMHNIGILALPGFVPFDCSIPFQLFSLACGKSGEHAYDLNFIGDTGRVSSGQFSIEGALPLAAMQEMNTVIVPGVTPSF
GVCSQGVLDALRQARDAGIRMASICTGACILAAAGLLDGMQATTHWSVAEELAARYPQIDVEADILFVDNGQVLTSAGLA
SGIDLCLHMIRQDLGAAAAEELAAFFVVPMERDGGQRQFIRRTGPESGGNLAPLLLWMQENMHKNLTLSSICRQAHMSSR
TLNRRFLEQVGAPPMLWLTRARVRRSQALLESSSMSVEEIAASTGFGSAASLRDHFRRTVGTSPTAWRKTFKRYYTGQDM
RE

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34917; Mature: 34917

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMHNIGILALPGFVPFDCSIPFQLFSLACGKSGEHAYDLNFIGDTGRVSSGQFSIEGAL
CCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEECCCC
PLAAMQEMNTVIVPGVTPSFGVCSQGVLDALRQARDAGIRMASICTGACILAAAGLLDGM
HHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCH
QATTHWSVAEELAARYPQIDVEADILFVDNGQVLTSAGLASGIDLCLHMIRQDLGAAAAE
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ELAAFFVVPMERDGGQRQFIRRTGPESGGNLAPLLLWMQENMHKNLTLSSICRQAHMSSR
HHHHEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TLNRRFLEQVGAPPMLWLTRARVRRSQALLESSSMSVEEIAASTGFGSAASLRDHFRRTV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHH
GTSPTAWRKTFKRYYTGQDMRE
CCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNMHNIGILALPGFVPFDCSIPFQLFSLACGKSGEHAYDLNFIGDTGRVSSGQFSIEGAL
CCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEECCCC
PLAAMQEMNTVIVPGVTPSFGVCSQGVLDALRQARDAGIRMASICTGACILAAAGLLDGM
HHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCH
QATTHWSVAEELAARYPQIDVEADILFVDNGQVLTSAGLASGIDLCLHMIRQDLGAAAAE
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ELAAFFVVPMERDGGQRQFIRRTGPESGGNLAPLLLWMQENMHKNLTLSSICRQAHMSSR
HHHHEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TLNRRFLEQVGAPPMLWLTRARVRRSQALLESSSMSVEEIAASTGFGSAASLRDHFRRTV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHH
GTSPTAWRKTFKRYYTGQDMRE
CCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]