Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220903312

Identifier: 220903312

GI number: 220903312

Start: 37280

End: 38386

Strand: Direct

Name: 220903312

Synonym: Ddes_0026

Alternate gene names: NA

Gene position: 37280-38386 (Clockwise)

Preceding gene: 220903305

Following gene: 220903327

Centisome position: 1.3

GC content: 62.51

Gene sequence:

>1107_bases
ATGCACATATCCGACAAGAAAGAGCGCCGCGCCCCGGCCGGCAGTGCTGATGGAGCGGGCGCGGAACGCCCGGCTGACGA
CCGCAAGCCCGCCGGAAAGCCCGGTGAAGGCGCTTCCTCCGCCAGGGCGGGCAAAAGCTCAGCGGGACGTCCGGCTTCCG
TGGCCGCGCAACCCTGGTACGCCGGGCAGCACAAAGACGCCCTTTTATACCTCATGATAGCCATTTTCTTTGTGGAACTG
GCCGTGGGCGGCGTGGCATTTTTTTATGGAGTCATGCATGCCGCGCCGGAAGTGCCGGGCGGGCCGCCCATGGCGCGCTT
TCCCTGGCTTGGCTGGGTGCTGGCCGCCATTCTGGCCCCGGTGGGCCTCATACTTATCGTGCACCTTGCCGGAACCTGGG
TTTCGCGCTTTCTCGGGCGTGAAGCCGGGGATGTGGCTGCATCCGGCGGAGGCGGCCATGCTGCCGATGCCGATCAGGTA
CCTGAACGGTTGCAGCGTTTTTACGCCATCATCCGCAATGCGCCCACGGTGGTGGTGCTGCTGGGCATTCTGCTGCTCGG
GGCCGCGCTTTTTTTTGTGGACGGGGCATTCACGGCCCTTGTGGCTCTGGGCAGTTCCCTTGTTCCCTATATTCCCTGGA
TCGCGGGCAGCGTGGCGGCCATGATTGCCGTGTGCTACCTTGTGCACCGCCTGTTTATCTATCGCCATCACCGCATGCAG
CAGGAGTTTGCCTACCGCCGCGAAGTGCTGGAGCGCACGGGCATAGTGCTGGTGGACAAAAACTGTATTCCGCTGCCGCA
GACGGAAGAACAGCGCCTGGCGCTGGGTGAGGCCCGCATTGTGGACGCCCGGGCAGCCTTGCCGCCGGCGGACGGTGCGC
CGCCTACGGAAAACCGGGAAACCCGGGAAGCCGGGAAACACGAAGAGTATGGTCAGAAGGGCCGCAATGCTTCGGGCAGT
GAGGGTTTTTCATCTGCCGGAAACGCTGAAGACGAGATTACGGATGCTGAAATAATCTCGCCCGAAATATCCGCCGAAAT
ATCTGCCGAAGTTCCTGCAGATACCGGAGACAATGAGGCCAAAAGCCGGTCAGCCGGAAAGGTCTGA

Upstream 100 bases:

>100_bases
GGTGGCTTTGATGAAAATCTGCCGCGCCCGGCCGTCCGGAACGGGTCTGGGGCTTGCGGGATGGCCCGTGGCAAAGTATG
CTGCGCAGCCAGAGGTGAGC

Downstream 100 bases:

>100_bases
GCAAACGCAGTTTGACAAAGCAGGTTATAGTGCCGCCGCCTGCGTCAGGCCGCGCCGTGCCAGCGCAATATCTGCCAGGG
CGTTGACGCAGGCCGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MHISDKKERRAPAGSADGAGAERPADDRKPAGKPGEGASSARAGKSSAGRPASVAAQPWYAGQHKDALLYLMIAIFFVEL
AVGGVAFFYGVMHAAPEVPGGPPMARFPWLGWVLAAILAPVGLILIVHLAGTWVSRFLGREAGDVAASGGGGHAADADQV
PERLQRFYAIIRNAPTVVVLLGILLLGAALFFVDGAFTALVALGSSLVPYIPWIAGSVAAMIAVCYLVHRLFIYRHHRMQ
QEFAYRREVLERTGIVLVDKNCIPLPQTEEQRLALGEARIVDARAALPPADGAPPTENRETREAGKHEEYGQKGRNASGS
EGFSSAGNAEDEITDAEIISPEISAEISAEVPADTGDNEAKSRSAGKV

Sequences:

>Translated_368_residues
MHISDKKERRAPAGSADGAGAERPADDRKPAGKPGEGASSARAGKSSAGRPASVAAQPWYAGQHKDALLYLMIAIFFVEL
AVGGVAFFYGVMHAAPEVPGGPPMARFPWLGWVLAAILAPVGLILIVHLAGTWVSRFLGREAGDVAASGGGGHAADADQV
PERLQRFYAIIRNAPTVVVLLGILLLGAALFFVDGAFTALVALGSSLVPYIPWIAGSVAAMIAVCYLVHRLFIYRHHRMQ
QEFAYRREVLERTGIVLVDKNCIPLPQTEEQRLALGEARIVDARAALPPADGAPPTENRETREAGKHEEYGQKGRNASGS
EGFSSAGNAEDEITDAEIISPEISAEISAEVPADTGDNEAKSRSAGKV
>Mature_368_residues
MHISDKKERRAPAGSADGAGAERPADDRKPAGKPGEGASSARAGKSSAGRPASVAAQPWYAGQHKDALLYLMIAIFFVEL
AVGGVAFFYGVMHAAPEVPGGPPMARFPWLGWVLAAILAPVGLILIVHLAGTWVSRFLGREAGDVAASGGGGHAADADQV
PERLQRFYAIIRNAPTVVVLLGILLLGAALFFVDGAFTALVALGSSLVPYIPWIAGSVAAMIAVCYLVHRLFIYRHHRMQ
QEFAYRREVLERTGIVLVDKNCIPLPQTEEQRLALGEARIVDARAALPPADGAPPTENRETREAGKHEEYGQKGRNASGS
EGFSSAGNAEDEITDAEIISPEISAEISAEVPADTGDNEAKSRSAGKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38875; Mature: 38875

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHISDKKERRAPAGSADGAGAERPADDRKPAGKPGEGASSARAGKSSAGRPASVAAQPWY
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
AGQHKDALLYLMIAIFFVELAVGGVAFFYGVMHAAPEVPGGPPMARFPWLGWVLAAILAP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
VGLILIVHLAGTWVSRFLGREAGDVAASGGGGHAADADQVPERLQRFYAIIRNAPTVVVL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
LGILLLGAALFFVDGAFTALVALGSSLVPYIPWIAGSVAAMIAVCYLVHRLFIYRHHRMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEFAYRREVLERTGIVLVDKNCIPLPQTEEQRLALGEARIVDARAALPPADGAPPTENRE
HHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHEEHHHHCCCCCCCCCCCCCCH
TREAGKHEEYGQKGRNASGSEGFSSAGNAEDEITDAEIISPEISAEISAEVPADTGDNEA
HHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHCHHHHCCCHHCCHHCCCCCCCCCCCHH
KSRSAGKV
HCCCCCCC
>Mature Secondary Structure
MHISDKKERRAPAGSADGAGAERPADDRKPAGKPGEGASSARAGKSSAGRPASVAAQPWY
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
AGQHKDALLYLMIAIFFVELAVGGVAFFYGVMHAAPEVPGGPPMARFPWLGWVLAAILAP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
VGLILIVHLAGTWVSRFLGREAGDVAASGGGGHAADADQVPERLQRFYAIIRNAPTVVVL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
LGILLLGAALFFVDGAFTALVALGSSLVPYIPWIAGSVAAMIAVCYLVHRLFIYRHHRMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEFAYRREVLERTGIVLVDKNCIPLPQTEEQRLALGEARIVDARAALPPADGAPPTENRE
HHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHEEHHHHCCCCCCCCCCCCCCH
TREAGKHEEYGQKGRNASGSEGFSSAGNAEDEITDAEIISPEISAEISAEVPADTGDNEA
HHHHCCHHHHHHCCCCCCCCCCCCCCCCCCHHHCHHHHCCCHHCCHHCCCCCCCCCCCHH
KSRSAGKV
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA