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The map label for this gene is yknW [H]

Identifier: 218906430

GI number: 218906430

Start: 5041161

End: 5041838

Strand: Reverse

Name: yknW [H]

Synonym: BCAH820_5344

Alternate gene names: 218906430

Gene position: 5041838-5041161 (Counterclockwise)

Preceding gene: 218906431

Following gene: 218906428

Centisome position: 95.08

GC content: 35.55

Gene sequence:

>678_bases
ATGGAAGCAAATATTAATACGCAAGATGCAGGTGGAAAGAAGCCGTCATTGTTTGGGATGATTACTTCTCCAGGCGAACA
GTTTGAGAGAATGAAGACGAAAAGTCCGGTTTGGGGCGCATTTGTCTTATTTATTTTATTGGGAACGGTTATGGCAACAG
GTGCAGCATACTTAACATTAATTAATACACCAGAAATGGCAAAAGAGTTAAATGGTGAAGCGGGAGCAATGATAAAAGGA
TTTGCTCTTGGTGGTGGAGCACTTGTTGGTGTGTTAGGTACGCCTATAGGTCTATTTATTGCAGCTGGATTTTATAAAAT
TATTATGATGTTTATGAGCAATGATACTCCATACATGAAGATATTATCTATTTACTTATATGCTAATCTTGTTTACTATA
TCGGTGGATTGTTAAATGTAGCATTAGGTTTTGTATTTGATGGAAATGGTGTTGATGTTTATACAAGTTTAGCTCCTTTA
TTTGAAAAAGGAACCGTGTTACATGGAATTGGCTCTTCAATTGAAATTTTCAATATTTGGAGTTTAGTTCTAACGGGACT
AGGGTTACATATTGTAGCTGGCTTAAGTAAGAAACAAGCTACAACATTAATTGTAATTTTCTTCGTTCTAACAGTTGCAT
TAGGTGTTGTAAAAGGTTTAGCTGGCATTGGTGCATAA

Upstream 100 bases:

>100_bases
AGAACTGCACATTACCGTTCTAGTGGGCGGTTCGTAGCCTCTATATGAGGAAGTGAACCGCCCGTTAGAACGGGTTACAT
AAATAGAAGGAGGCGTTATA

Downstream 100 bases:

>100_bases
TATATTTGTTAAAAAAGGTGGCTCTTCGGAGTCACCTTTTTTATTTTTACCCCTATTTCAAATACCACTAACAGAATTTC
AAATTCTACTTCATGTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MEANINTQDAGGKKPSLFGMITSPGEQFERMKTKSPVWGAFVLFILLGTVMATGAAYLTLINTPEMAKELNGEAGAMIKG
FALGGGALVGVLGTPIGLFIAAGFYKIIMMFMSNDTPYMKILSIYLYANLVYYIGGLLNVALGFVFDGNGVDVYTSLAPL
FEKGTVLHGIGSSIEIFNIWSLVLTGLGLHIVAGLSKKQATTLIVIFFVLTVALGVVKGLAGIGA

Sequences:

>Translated_225_residues
MEANINTQDAGGKKPSLFGMITSPGEQFERMKTKSPVWGAFVLFILLGTVMATGAAYLTLINTPEMAKELNGEAGAMIKG
FALGGGALVGVLGTPIGLFIAAGFYKIIMMFMSNDTPYMKILSIYLYANLVYYIGGLLNVALGFVFDGNGVDVYTSLAPL
FEKGTVLHGIGSSIEIFNIWSLVLTGLGLHIVAGLSKKQATTLIVIFFVLTVALGVVKGLAGIGA
>Mature_225_residues
MEANINTQDAGGKKPSLFGMITSPGEQFERMKTKSPVWGAFVLFILLGTVMATGAAYLTLINTPEMAKELNGEAGAMIKG
FALGGGALVGVLGTPIGLFIAAGFYKIIMMFMSNDTPYMKILSIYLYANLVYYIGGLLNVALGFVFDGNGVDVYTSLAPL
FEKGTVLHGIGSSIEIFNIWSLVLTGLGLHIVAGLSKKQATTLIVIFFVLTVALGVVKGLAGIGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 23656; Mature: 23656

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEANINTQDAGGKKPSLFGMITSPGEQFERMKTKSPVWGAFVLFILLGTVMATGAAYLTL
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEE
INTPEMAKELNGEAGAMIKGFALGGGALVGVLGTPIGLFIAAGFYKIIMMFMSNDTPYMK
ECCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHH
ILSIYLYANLVYYIGGLLNVALGFVFDGNGVDVYTSLAPLFEKGTVLHGIGSSIEIFNIW
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHH
SLVLTGLGLHIVAGLSKKQATTLIVIFFVLTVALGVVKGLAGIGA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEANINTQDAGGKKPSLFGMITSPGEQFERMKTKSPVWGAFVLFILLGTVMATGAAYLTL
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEE
INTPEMAKELNGEAGAMIKGFALGGGALVGVLGTPIGLFIAAGFYKIIMMFMSNDTPYMK
ECCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHH
ILSIYLYANLVYYIGGLLNVALGFVFDGNGVDVYTSLAPLFEKGTVLHGIGSSIEIFNIW
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHH
SLVLTGLGLHIVAGLSKKQATTLIVIFFVLTVALGVVKGLAGIGA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]