Click here to switch to the map view.

The map label for this gene is ydaM [H]

Identifier: 218906413

GI number: 218906413

Start: 5024602

End: 5025903

Strand: Direct

Name: ydaM [H]

Synonym: BCAH820_5327

Alternate gene names: 218906413

Gene position: 5024602-5025903 (Clockwise)

Preceding gene: 218906412

Following gene: 218906416

Centisome position: 94.76

GC content: 37.33

Gene sequence:

>1302_bases
ATGATGACACTCGTTATACTTCTTTTATTCCTCCTGTTTTGCGTACTTGTTTTTTGGATTAGCATCACATTTTCGATTAA
GTATGTACTTATTTTTACAGCCTTTCTATTCTCTGGCTTACTTGTTTACTATTCCTTCTTAACACTCGCAGGTCTAGTTC
ACCGAAATAGTAAACGAAAAGATCGTACGCTAGAACATTACCCAAGCGTCGATATTTTAATACCAGCTCACAATGAAGGG
GTCGTTATTAAAGATACTTTAGAGGCGATGGCGAAGATTGAATATCCAGGCAAACTAACTGTTTATTTATTGAACGATAA
CTCGCAAGATGAGACACCTGAAATTGGTGACGATTTTGACAAAGCTTATGCTCATATTCGTCACATTCGCGTTCCACCTG
GTGAACCAAAAGGAAAATCACGTGTATTAAACTATGGCCTTAGTATTTCAGATGGTGAATACTTCTGTGTTTATGATGCA
GATAACCAGCCTGAACCACATGCACTACGAATGCTCGTAGAACACGCTGAAACAACCGAGGATGCTGTTGGAGCTGTTGG
ACATGTTCGTACTGTAAATGAAAAAAGAAACTGGCTAACACGAATGATTTCGTTAGAATTTCAAATCTTCCAGCTCCTTA
TGCAATCCGGACGCTGGTTACTATTCCAAACAGGTTCATTAACAGGAACAAACATGCTTCTTCGCCGCGCTGCATTAGAG
GAACTTGGCGGCTATGATCCTTATGCAATTGCAGAGGACGCTGAATTAACATTACGAATTACACAAAAAGGCTATCTTTT
ACCAATCGTTCCAGAATCGGTTACATGGGAACAAGAACCTGAACATTTAAAAATCCTTATTAAGCAGCGTACACGTTGGC
TCCAAGGGAACTTGTACATTTTAGAAAAAATGTTCTCTTCATTAAGTTTCTTTAAAGGAAAACTTCTCGTCCATTCTTTA
CAACAAGTTTTAGTGTATGTTGTCTTTTGGTTATTCTTAATCATTTCGAACGTTTGGTTTGTAATTGGGCTACTCGGGAT
ATTCCAAATTCAATATAGCATTCCGCTACTATTCATGTGGTATGTCGCATACATTACATATGTTTCTCAATTATTTAGTG
CCCAGAGTGTGGAACGAACCTTTACACCAACTAATATTTTTATTAGTGTTATCATGTACTTTACTTACGCACAGCTCTTT
ACGTACTTATTCATTCGTAGCTTAATTTTATACTTACGTGCAAAGAGCAAGAAACAAGTCATTGGCTGGGATAAAACAGT
TCGATTCAAAAAAGATAAATAA

Upstream 100 bases:

>100_bases
ACCGCCTAAAGCCAAAAATGGAGCAATGGCTTGCTGCTGAAGCGATCCAAGATATAAAAATTTCACGCGAGCAAATTGGG
AACAAAGGACAGACGTTATT

Downstream 100 bases:

>100_bases
AAATAAGCACAGAGCGCCGTATGCTCTGTGCTTATTTATTGCCGTATAAAATATATATCAGACAATACCCCTTAGCTGAA
AGTAATTTCACGTCCATCCC

Product: glycosyl transferase, group 2 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MMTLVILLLFLLFCVLVFWISITFSIKYVLIFTAFLFSGLLVYYSFLTLAGLVHRNSKRKDRTLEHYPSVDILIPAHNEG
VVIKDTLEAMAKIEYPGKLTVYLLNDNSQDETPEIGDDFDKAYAHIRHIRVPPGEPKGKSRVLNYGLSISDGEYFCVYDA
DNQPEPHALRMLVEHAETTEDAVGAVGHVRTVNEKRNWLTRMISLEFQIFQLLMQSGRWLLFQTGSLTGTNMLLRRAALE
ELGGYDPYAIAEDAELTLRITQKGYLLPIVPESVTWEQEPEHLKILIKQRTRWLQGNLYILEKMFSSLSFFKGKLLVHSL
QQVLVYVVFWLFLIISNVWFVIGLLGIFQIQYSIPLLFMWYVAYITYVSQLFSAQSVERTFTPTNIFISVIMYFTYAQLF
TYLFIRSLILYLRAKSKKQVIGWDKTVRFKKDK

Sequences:

>Translated_433_residues
MMTLVILLLFLLFCVLVFWISITFSIKYVLIFTAFLFSGLLVYYSFLTLAGLVHRNSKRKDRTLEHYPSVDILIPAHNEG
VVIKDTLEAMAKIEYPGKLTVYLLNDNSQDETPEIGDDFDKAYAHIRHIRVPPGEPKGKSRVLNYGLSISDGEYFCVYDA
DNQPEPHALRMLVEHAETTEDAVGAVGHVRTVNEKRNWLTRMISLEFQIFQLLMQSGRWLLFQTGSLTGTNMLLRRAALE
ELGGYDPYAIAEDAELTLRITQKGYLLPIVPESVTWEQEPEHLKILIKQRTRWLQGNLYILEKMFSSLSFFKGKLLVHSL
QQVLVYVVFWLFLIISNVWFVIGLLGIFQIQYSIPLLFMWYVAYITYVSQLFSAQSVERTFTPTNIFISVIMYFTYAQLF
TYLFIRSLILYLRAKSKKQVIGWDKTVRFKKDK
>Mature_433_residues
MMTLVILLLFLLFCVLVFWISITFSIKYVLIFTAFLFSGLLVYYSFLTLAGLVHRNSKRKDRTLEHYPSVDILIPAHNEG
VVIKDTLEAMAKIEYPGKLTVYLLNDNSQDETPEIGDDFDKAYAHIRHIRVPPGEPKGKSRVLNYGLSISDGEYFCVYDA
DNQPEPHALRMLVEHAETTEDAVGAVGHVRTVNEKRNWLTRMISLEFQIFQLLMQSGRWLLFQTGSLTGTNMLLRRAALE
ELGGYDPYAIAEDAELTLRITQKGYLLPIVPESVTWEQEPEHLKILIKQRTRWLQGNLYILEKMFSSLSFFKGKLLVHSL
QQVLVYVVFWLFLIISNVWFVIGLLGIFQIQYSIPLLFMWYVAYITYVSQLFSAQSVERTFTPTNIFISVIMYFTYAQLF
TYLFIRSLILYLRAKSKKQVIGWDKTVRFKKDK

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=246, Percent_Identity=27.2357723577236, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI87082284, Length=324, Percent_Identity=27.1604938271605, Blast_Score=82, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 50265; Mature: 50265

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLVILLLFLLFCVLVFWISITFSIKYVLIFTAFLFSGLLVYYSFLTLAGLVHRNSKRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DRTLEHYPSVDILIPAHNEGVVIKDTLEAMAKIEYPGKLTVYLLNDNSQDETPEIGDDFD
CCCHHHCCCEEEEEECCCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHH
KAYAHIRHIRVPPGEPKGKSRVLNYGLSISDGEYFCVYDADNQPEPHALRMLVEHAETTE
HHHHHHHEEECCCCCCCCCHHHHHCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHCCHH
DAVGAVGHVRTVNEKRNWLTRMISLEFQIFQLLMQSGRWLLFQTGSLTGTNMLLRRAALE
HHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH
ELGGYDPYAIAEDAELTLRITQKGYLLPIVPESVTWEQEPEHLKILIKQRTRWLQGNLYI
HHCCCCCCEECCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
LEKMFSSLSFFKGKLLVHSLQQVLVYVVFWLFLIISNVWFVIGLLGIFQIQYSIPLLFMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVAYITYVSQLFSAQSVERTFTPTNIFISVIMYFTYAQLFTYLFIRSLILYLRAKSKKQV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
IGWDKTVRFKKDK
ECCCCEEEEECCC
>Mature Secondary Structure
MMTLVILLLFLLFCVLVFWISITFSIKYVLIFTAFLFSGLLVYYSFLTLAGLVHRNSKRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DRTLEHYPSVDILIPAHNEGVVIKDTLEAMAKIEYPGKLTVYLLNDNSQDETPEIGDDFD
CCCHHHCCCEEEEEECCCCCEEEHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHH
KAYAHIRHIRVPPGEPKGKSRVLNYGLSISDGEYFCVYDADNQPEPHALRMLVEHAETTE
HHHHHHHEEECCCCCCCCCHHHHHCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHCCHH
DAVGAVGHVRTVNEKRNWLTRMISLEFQIFQLLMQSGRWLLFQTGSLTGTNMLLRRAALE
HHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH
ELGGYDPYAIAEDAELTLRITQKGYLLPIVPESVTWEQEPEHLKILIKQRTRWLQGNLYI
HHCCCCCCEECCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
LEKMFSSLSFFKGKLLVHSLQQVLVYVVFWLFLIISNVWFVIGLLGIFQIQYSIPLLFMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVAYITYVSQLFSAQSVERTFTPTNIFISVIMYFTYAQLFTYLFIRSLILYLRAKSKKQV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
IGWDKTVRFKKDK
ECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]