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The map label for this gene is degV [H]

Identifier: 218906372

GI number: 218906372

Start: 4977879

End: 4978721

Strand: Reverse

Name: degV [H]

Synonym: BCAH820_5286

Alternate gene names: 218906372

Gene position: 4978721-4977879 (Counterclockwise)

Preceding gene: 218906375

Following gene: 218906371

Centisome position: 93.89

GC content: 37.37

Gene sequence:

>843_bases
ATGAAAACAGCTATTGTTACTGATAGTACAGCATATATACCGAAGCATATTCGTGATGAACTCAATATATATATGATTCC
ATTAAACGTTGTGTTTGGAACGGAATCTTATCAAGAAGAAGCTGAAATTTCAGCAGATGATTTTTATGTAAAAGTACGTG
AGCAAGAAGAACTTCCGAAAACTTCTCAACCAGCAATCGGAAAGTTTGTTGAGCTATATGAAGGATTATCTAAGGATTAT
GATGCAGTTATTAGCATTCATCTTTCAAGTGGGATTAGTGGTACATATCAAACGTCAACGACAGCTGGTCAAATGGTAGA
GGGTATCGATGTATATACGTACGACTCTGAAATTAGTTGTGAAGTGCAAGGATTCTATGTGCGTGAAGGTGCAAGGCTAG
CAAGCGAAGGAAAGGATCCAAAAGAGATTATCGCCCGTTTTGATGAAATGAAGAAAACGATGGACGCTTATTTTGTAGTA
GATGATTTACACCATTTACAACGTGGAGGACGATTAAATAGCGCGCAAGCTTTCATCGGTAGTCTGTTACAAGTAAAGCC
GGTTTTATATTTTAGAGACAAAATCATTATTCCGTTTGAAAAGATTCGTACGCGTAAAAAAGCGTTAAAACGTATCATTG
AAATTTTTGATGAGCAAGCGAGTAAAGGTGTACCTATGGAAGCAGTTATCATTCATGCACAACGTGAAGAAGAAGCGAAT
GAATGGAAGAAAGAATTAGAAGCAAAATATCCACATGTTACAATTCGTACCGGTTATTTCGGTGCTGTAATTGGAACGCA
TTTAGGTGAAGGTGCACTAGGTCTTGGATGGTATACGAAGTAA

Upstream 100 bases:

>100_bases
GAGTATAATTTCAAACCCGCATTTTCATGTATGGATGCACCATTTTTAGTTTTCGTGTAAAATTAGGAAATAAAAACTTT
TTTATAAGGCAGGTACGAAA

Downstream 100 bases:

>100_bases
TAAAGATATAAAAAGCTCTCTTTCGGAAGAGGGTTTTTTTACGGATATTTTACGTTCAGTTGACAAGTTAATATTTGGAA
ATGGTAAAATGTACGTAAAA

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKTAIVTDSTAYIPKHIRDELNIYMIPLNVVFGTESYQEEAEISADDFYVKVREQEELPKTSQPAIGKFVELYEGLSKDY
DAVISIHLSSGISGTYQTSTTAGQMVEGIDVYTYDSEISCEVQGFYVREGARLASEGKDPKEIIARFDEMKKTMDAYFVV
DDLHHLQRGGRLNSAQAFIGSLLQVKPVLYFRDKIIIPFEKIRTRKKALKRIIEIFDEQASKGVPMEAVIIHAQREEEAN
EWKKELEAKYPHVTIRTGYFGAVIGTHLGEGALGLGWYTK

Sequences:

>Translated_280_residues
MKTAIVTDSTAYIPKHIRDELNIYMIPLNVVFGTESYQEEAEISADDFYVKVREQEELPKTSQPAIGKFVELYEGLSKDY
DAVISIHLSSGISGTYQTSTTAGQMVEGIDVYTYDSEISCEVQGFYVREGARLASEGKDPKEIIARFDEMKKTMDAYFVV
DDLHHLQRGGRLNSAQAFIGSLLQVKPVLYFRDKIIIPFEKIRTRKKALKRIIEIFDEQASKGVPMEAVIIHAQREEEAN
EWKKELEAKYPHVTIRTGYFGAVIGTHLGEGALGLGWYTK
>Mature_280_residues
MKTAIVTDSTAYIPKHIRDELNIYMIPLNVVFGTESYQEEAEISADDFYVKVREQEELPKTSQPAIGKFVELYEGLSKDY
DAVISIHLSSGISGTYQTSTTAGQMVEGIDVYTYDSEISCEVQGFYVREGARLASEGKDPKEIIARFDEMKKTMDAYFVV
DDLHHLQRGGRLNSAQAFIGSLLQVKPVLYFRDKIIIPFEKIRTRKKALKRIIEIFDEQASKGVPMEAVIIHAQREEEAN
EWKKELEAKYPHVTIRTGYFGAVIGTHLGEGALGLGWYTK

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31675; Mature: 31675

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAIVTDSTAYIPKHIRDELNIYMIPLNVVFGTESYQEEAEISADDFYVKVREQEELPK
CCCEEECCCCHHHHHHHHCCCEEEEEEEEEEECCCCHHHHCCCCCCCEEEEEECHHCCCC
TSQPAIGKFVELYEGLSKDYDAVISIHLSSGISGTYQTSTTAGQMVEGIDVYTYDSEISC
CCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEECCCCHHHHHCCCEEEEECCCEEE
EVQGFYVREGARLASEGKDPKEIIARFDEMKKTMDAYFVVDDLHHLQRGGRLNSAQAFIG
EEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SLLQVKPVLYFRDKIIIPFEKIRTRKKALKRIIEIFDEQASKGVPMEAVIIHAQREEEAN
HHHHHHHHEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHH
EWKKELEAKYPHVTIRTGYFGAVIGTHLGEGALGLGWYTK
HHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKTAIVTDSTAYIPKHIRDELNIYMIPLNVVFGTESYQEEAEISADDFYVKVREQEELPK
CCCEEECCCCHHHHHHHHCCCEEEEEEEEEEECCCCHHHHCCCCCCCEEEEEECHHCCCC
TSQPAIGKFVELYEGLSKDYDAVISIHLSSGISGTYQTSTTAGQMVEGIDVYTYDSEISC
CCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEECCCCHHHHHCCCEEEEECCCEEE
EVQGFYVREGARLASEGKDPKEIIARFDEMKKTMDAYFVVDDLHHLQRGGRLNSAQAFIG
EEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SLLQVKPVLYFRDKIIIPFEKIRTRKKALKRIIEIFDEQASKGVPMEAVIIHAQREEEAN
HHHHHHHHEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHH
EWKKELEAKYPHVTIRTGYFGAVIGTHLGEGALGLGWYTK
HHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 9384377; 3141378 [H]