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The map label for this gene is yclN [H]

Identifier: 218906284

GI number: 218906284

Start: 4897093

End: 4897935

Strand: Reverse

Name: yclN [H]

Synonym: BCAH820_5196

Alternate gene names: 218906284

Gene position: 4897935-4897093 (Counterclockwise)

Preceding gene: 218906285

Following gene: 218906283

Centisome position: 92.37

GC content: 37.13

Gene sequence:

>843_bases
ATGTTTTTCATCACTCGTGTTCCGAGAACAGCTGCATTAATGCTTACTGGAGCTGCGATGGCGATGGCAGGACTCGTAAT
GCAACTCATTACACAGAATCGCTTTGTTGAACCGACTACAACGGGGACTATTGAATGGTCAGGCTTAGGCCTGCTTTTTG
TGTATTTATTATTTCCTGCCCCGACTTTAGTTCAAAGAATGACTGGTGCAATCATTTTTTCTTTTATAGGAACTATGATT
TTCTTTCTATTTTTAAGAAGAGTTAAGCTTCGTTCGTCTTTAATTGTCCCGATTATTGGATTGATGCTTGGAGCAGTTAT
TTCTGCAGTGTCTACTTTTTTAGGACTTCTTTTTCAAATGACGCAAAGTATTGAAACTTGGTTTGTAGGTTCATTTGCTA
ACATTCAGGTGGGAAGATATGAATATTTATGGCTGATTGTTATCATTACTTTTCTTATTTTTATGTATGCTAATAGATTG
ACTTTAGCTGGACTAGGAGAAGATGTCGCAACAAGTCTTGGAGTTAATTACAATCGAATTGTTCTTTTTGGGACTGCTCT
TATCTCTGTTGCAGTTGGAATTGTTGCAGCTGTTATTGGACACTTACCTTTCTTAGGATTAATTGTGCCAAATATCGTTT
CAATGTTTAGAGGTGATGATCTTAGGAGTAATTTACCTTGGGTTTGTGTCATCGGAATGGGATCAATAACTGCCTGTGAC
ATCATTTCTCGAACAATTATTCAGCCTTTTGAATTACCTGTTTCTTTAATACTTGCAACAGTGGGAGCAGTCGTGTTTAT
TACTATTTTATTGAGACAAAGAAAACCAAGGAGGCTACGATGA

Upstream 100 bases:

>100_bases
AAAACCTTTTATAATAGCGATTATAGTTGTTATAATTTTAGGGATTATATCACTGTTTACTGGAGTTTATGATATACGTG
GACAAGAGGACGGGACAGAG

Downstream 100 bases:

>100_bases
TCACATTAGAATATAGAAAAAAAGAAAATGTCGAAATCGATTCTAGCCTTCATAATGAAAGTAGATCAGCTAGCGCTTTT
CGGTCTAAGAAGGAAGCAAG

Product: iron compound ABC transporter, permease protein

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MFFITRVPRTAALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSGLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMI
FFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQMTQSIETWFVGSFANIQVGRYEYLWLIVIITFLIFMYANRL
TLAGLGEDVATSLGVNYNRIVLFGTALISVAVGIVAAVIGHLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGSITACD
IISRTIIQPFELPVSLILATVGAVVFITILLRQRKPRRLR

Sequences:

>Translated_280_residues
MFFITRVPRTAALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSGLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMI
FFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQMTQSIETWFVGSFANIQVGRYEYLWLIVIITFLIFMYANRL
TLAGLGEDVATSLGVNYNRIVLFGTALISVAVGIVAAVIGHLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGSITACD
IISRTIIQPFELPVSLILATVGAVVFITILLRQRKPRRLR
>Mature_280_residues
MFFITRVPRTAALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSGLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMI
FFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQMTQSIETWFVGSFANIQVGRYEYLWLIVIITFLIFMYANRL
TLAGLGEDVATSLGVNYNRIVLFGTALISVAVGIVAAVIGHLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGSITACD
IISRTIIQPFELPVSLILATVGAVVFITILLRQRKPRRLR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=278, Percent_Identity=32.0143884892086, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1790740, Length=283, Percent_Identity=27.9151943462898, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790741, Length=279, Percent_Identity=24.7311827956989, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1786805, Length=278, Percent_Identity=28.0575539568345, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 30829; Mature: 30829

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFITRVPRTAALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSGLGLLFVYLLFPA
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCC
PTLVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQSIETWFVGSFANIQVGRYEYLWLIVIITFLIFMYANRLTLAGLGEDVATSLGVNYNRI
HHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCHH
VLFGTALISVAVGIVAAVIGHLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGSITACD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHH
IISRTIIQPFELPVSLILATVGAVVFITILLRQRKPRRLR
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFFITRVPRTAALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSGLGLLFVYLLFPA
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCC
PTLVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQSIETWFVGSFANIQVGRYEYLWLIVIITFLIFMYANRLTLAGLGEDVATSLGVNYNRI
HHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCCHH
VLFGTALISVAVGIVAAVIGHLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGSITACD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHH
IISRTIIQPFELPVSLILATVGAVVFITILLRQRKPRRLR
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]