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The map label for this gene is mcpC [H]

Identifier: 218906212

GI number: 218906212

Start: 4821805

End: 4823814

Strand: Reverse

Name: mcpC [H]

Synonym: BCAH820_5124

Alternate gene names: 218906212

Gene position: 4823814-4821805 (Counterclockwise)

Preceding gene: 218906214

Following gene: 218906211

Centisome position: 90.97

GC content: 36.77

Gene sequence:

>2010_bases
TTGGGGGATATGTTAAGAAGTTTACGTTTAAAAATTGCGGTAGTATTTTCGGTACTTATTTCTATGATGTTCGTAATATT
AGGTACAGCTATGTATCAATTACAGAAAGAGAAGGAAGTGCGCTCCTTAGACCAGTATTCTCAAAATACGATGGATCTTG
TGACAGAACAGTTAACTGCATTTATGCAGCGAATTGAAGAAGATATGGGGCATTATGGAAGTCATGATGATATTCAAAAC
ATGCTACAAGATGGAGTTACTCCAGAGGAAGAGAGCTTTATTTTAAAAGAGTTTTCAAGATTTAAAAAGAACCATCCTGA
TATTTTAGATGTATACATTGGGACAAAAGATAAAAAAACGTTGAGCGCAAATCTCGCTGACGGAGGAAAAGTACCAGAAG
GGTATGATCCAACGAGTCGTCAGTGGTATAAAGCATCAGAATCTGATACGAAATCGATTATTTGGGGACAACCACAATAT
GAAATCGCGACAGGTAAGTTAAGCATTGGAGTGTCAAAAGCAATTGTCGGACAAGATGGATCTGTATTAGGGGTAGTAGC
AATGGATGTATCATTAGGAACAATTCAAAAGCTACTCCACAATATTCAATATAATAACGGCGGAGAAATGTTTATCGTAA
ATGATAAAAATATTGCCATTGTATACCCAGAGAAAGTAGGAAAAGATGTTTCAAAGGAACCACTTTTAAAAAGTTTGAAT
AAAGATGAAACAAAATTTGCGGTGACAACATTAGGCGGAAAAGATGTAGTAGCCTATAGTCAACTGTTTGATAAGATGAA
ATGGAAAATTGGGATTGTTTATCCGAAAGAAACGATTGATGGGCTATTAAATAGTACGAGAAATACAGTCATTATAATGG
CATGTATTAGCTTATTCGTTGGAATTGTAGCTTCATACTTGTTCTCAAGAAGATTAGCAAGACCACTGCAACTATTAACG
AATCACGTTCAAAAAGTAGCAGAAGGTGATTTAACGTTGCAAATGAAAGTGACAAGTAAGGATGAAGTTGGAGAACTGAC
GAACCATTTTAATCATATGGTTGAGCAAATGAATGAAATGGTAAGTAAAATTAAAAATAGTGTATCAACCGTGCAACAAT
CAACGAATAATCTACATTATTTAACGAATGAAACTGTAGCAGCTAGTAAAGAAGTGTCAGGTGCAATGGATGATGTAAGC
GGAGGAGCATCCACTCTTGCAAATAGTGTAGATGAAGTTTCAGAGCAGCTTGAAAATATGATACAGTCAGTGGAACAAAT
GAATAGCTCCGTTGGTGAAATAAAAGGAGTAGCTGGCAAAGCAGAAGAGGCATCTAAGCAAGGATTGAATACGATGCGAA
ATTTAGTTCGTACAAGAGAACAATCCTCTTCAATTGTTGTTCATACAGAGGAAGCATCTGGAAAGTTGGAGCAAAGGGTT
GGATCGATTCAAAATGTTGTAGAGCTTATAAAAGGTATTTCGGATCAAACGAATTTACTTGCTTTAAATGCTTCAATTGA
GGCGGCACGTGCGGGTGAACAAGGTAAAGGCTTTGCTGTTGTTGCTGAAGAGGTTCGAAAATTAGCGGAACAATCAAAAG
AAGCAACAGTAGAAATTGCGACGATGATTGGTGATGTACAAGTAGAGGTAAGACGAGTTGTAGAAGTTGTAAGTAAATTA
AAAGATATTGCGGATATACAAAATAATGTTACGACAGAAGCAGAGGCGGAGTTCCGTACAATTATGTCAGTTGTTAATAT
CATTAGTACTTCAGTGGAACAAATTGTAGAAGAGGTACATAACATCGGTCACGAGCAAGGAGAAATTACAGCGGTAATGC
ATACAATTGCTGGTACGAGTCAAGAAAGTGCAGCTGTTTCGGAAGAAGTAAATGCTGCAACTGAATCACAAGTGAATCAT
TTAGAAAAGGTAGCTCATACGATGGAAAGTTTGACGGAGCATATGAGAGACTTGGGAAGATTGGTTGAGCAATTTAAAAT
AGAGGAATAA

Upstream 100 bases:

>100_bases
TACTCAGATTGAAGTGAGAATTAGTTTCAATTTTTTAATTTTATCTATTATACTTAATATAATGATTAATAAGATTTGAA
TTCAATGCGAAGGGGATGCT

Downstream 100 bases:

>100_bases
CAAATTAGTAAAATGATGCGTATTTCGGTAAAATAGATAATGGATATATAAGAAGCAATTATAGGAGGAAGACTACTATG
GCAATTGTTGACGTATCGAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 669; Mature: 668

Protein sequence:

>669_residues
MGDMLRSLRLKIAVVFSVLISMMFVILGTAMYQLQKEKEVRSLDQYSQNTMDLVTEQLTAFMQRIEEDMGHYGSHDDIQN
MLQDGVTPEEESFILKEFSRFKKNHPDILDVYIGTKDKKTLSANLADGGKVPEGYDPTSRQWYKASESDTKSIIWGQPQY
EIATGKLSIGVSKAIVGQDGSVLGVVAMDVSLGTIQKLLHNIQYNNGGEMFIVNDKNIAIVYPEKVGKDVSKEPLLKSLN
KDETKFAVTTLGGKDVVAYSQLFDKMKWKIGIVYPKETIDGLLNSTRNTVIIMACISLFVGIVASYLFSRRLARPLQLLT
NHVQKVAEGDLTLQMKVTSKDEVGELTNHFNHMVEQMNEMVSKIKNSVSTVQQSTNNLHYLTNETVAASKEVSGAMDDVS
GGASTLANSVDEVSEQLENMIQSVEQMNSSVGEIKGVAGKAEEASKQGLNTMRNLVRTREQSSSIVVHTEEASGKLEQRV
GSIQNVVELIKGISDQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEATVEIATMIGDVQVEVRRVVEVVSKL
KDIADIQNNVTTEAEAEFRTIMSVVNIISTSVEQIVEEVHNIGHEQGEITAVMHTIAGTSQESAAVSEEVNAATESQVNH
LEKVAHTMESLTEHMRDLGRLVEQFKIEE

Sequences:

>Translated_669_residues
MGDMLRSLRLKIAVVFSVLISMMFVILGTAMYQLQKEKEVRSLDQYSQNTMDLVTEQLTAFMQRIEEDMGHYGSHDDIQN
MLQDGVTPEEESFILKEFSRFKKNHPDILDVYIGTKDKKTLSANLADGGKVPEGYDPTSRQWYKASESDTKSIIWGQPQY
EIATGKLSIGVSKAIVGQDGSVLGVVAMDVSLGTIQKLLHNIQYNNGGEMFIVNDKNIAIVYPEKVGKDVSKEPLLKSLN
KDETKFAVTTLGGKDVVAYSQLFDKMKWKIGIVYPKETIDGLLNSTRNTVIIMACISLFVGIVASYLFSRRLARPLQLLT
NHVQKVAEGDLTLQMKVTSKDEVGELTNHFNHMVEQMNEMVSKIKNSVSTVQQSTNNLHYLTNETVAASKEVSGAMDDVS
GGASTLANSVDEVSEQLENMIQSVEQMNSSVGEIKGVAGKAEEASKQGLNTMRNLVRTREQSSSIVVHTEEASGKLEQRV
GSIQNVVELIKGISDQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEATVEIATMIGDVQVEVRRVVEVVSKL
KDIADIQNNVTTEAEAEFRTIMSVVNIISTSVEQIVEEVHNIGHEQGEITAVMHTIAGTSQESAAVSEEVNAATESQVNH
LEKVAHTMESLTEHMRDLGRLVEQFKIEE
>Mature_668_residues
GDMLRSLRLKIAVVFSVLISMMFVILGTAMYQLQKEKEVRSLDQYSQNTMDLVTEQLTAFMQRIEEDMGHYGSHDDIQNM
LQDGVTPEEESFILKEFSRFKKNHPDILDVYIGTKDKKTLSANLADGGKVPEGYDPTSRQWYKASESDTKSIIWGQPQYE
IATGKLSIGVSKAIVGQDGSVLGVVAMDVSLGTIQKLLHNIQYNNGGEMFIVNDKNIAIVYPEKVGKDVSKEPLLKSLNK
DETKFAVTTLGGKDVVAYSQLFDKMKWKIGIVYPKETIDGLLNSTRNTVIIMACISLFVGIVASYLFSRRLARPLQLLTN
HVQKVAEGDLTLQMKVTSKDEVGELTNHFNHMVEQMNEMVSKIKNSVSTVQQSTNNLHYLTNETVAASKEVSGAMDDVSG
GASTLANSVDEVSEQLENMIQSVEQMNSSVGEIKGVAGKAEEASKQGLNTMRNLVRTREQSSSIVVHTEEASGKLEQRVG
SIQNVVELIKGISDQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEATVEIATMIGDVQVEVRRVVEVVSKLK
DIADIQNNVTTEAEAEFRTIMSVVNIISTSVEQIVEEVHNIGHEQGEITAVMHTIAGTSQESAAVSEEVNAATESQVNHL
EKVAHTMESLTEHMRDLGRLVEQFKIEE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=305, Percent_Identity=28.8524590163934, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI1787690, Length=378, Percent_Identity=27.2486772486773, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI1788195, Length=240, Percent_Identity=29.1666666666667, Blast_Score=109, Evalue=7e-25,
Organism=Escherichia coli, GI1788194, Length=313, Percent_Identity=27.4760383386581, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1789453, Length=329, Percent_Identity=30.0911854103343, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 73697; Mature: 73566

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDMLRSLRLKIAVVFSVLISMMFVILGTAMYQLQKEKEVRSLDQYSQNTMDLVTEQLTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMQRIEEDMGHYGSHDDIQNMLQDGVTPEEESFILKEFSRFKKNHPDILDVYIGTKDKKT
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
LSANLADGGKVPEGYDPTSRQWYKASESDTKSIIWGQPQYEIATGKLSIGVSKAIVGQDG
HCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEECCCCEEEECCEEECCHHHHHCCCCC
SVLGVVAMDVSLGTIQKLLHNIQYNNGGEMFIVNDKNIAIVYPEKVGKDVSKEPLLKSLN
CEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCHHHCCCCCHHHHHHHCC
KDETKFAVTTLGGKDVVAYSQLFDKMKWKIGIVYPKETIDGLLNSTRNTVIIMACISLFV
CCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHH
GIVASYLFSRRLARPLQLLTNHVQKVAEGDLTLQMKVTSKDEVGELTNHFNHMVEQMNEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
VSKIKNSVSTVQQSTNNLHYLTNETVAASKEVSGAMDDVSGGASTLANSVDEVSEQLENM
HHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHH
IQSVEQMNSSVGEIKGVAGKAEEASKQGLNTMRNLVRTREQSSSIVVHTEEASGKLEQRV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHCCHHHHHH
GSIQNVVELIKGISDQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEATVEIA
HHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TMIGDVQVEVRRVVEVVSKLKDIADIQNNVTTEAEAEFRTIMSVVNIISTSVEQIVEEVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIGHEQGEITAVMHTIAGTSQESAAVSEEVNAATESQVNHLEKVAHTMESLTEHMRDLGR
HCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVEQFKIEE
HHHHHCCCC
>Mature Secondary Structure 
GDMLRSLRLKIAVVFSVLISMMFVILGTAMYQLQKEKEVRSLDQYSQNTMDLVTEQLTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMQRIEEDMGHYGSHDDIQNMLQDGVTPEEESFILKEFSRFKKNHPDILDVYIGTKDKKT
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
LSANLADGGKVPEGYDPTSRQWYKASESDTKSIIWGQPQYEIATGKLSIGVSKAIVGQDG
HCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEECCCCEEEECCEEECCHHHHHCCCCC
SVLGVVAMDVSLGTIQKLLHNIQYNNGGEMFIVNDKNIAIVYPEKVGKDVSKEPLLKSLN
CEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCHHHCCCCCHHHHHHHCC
KDETKFAVTTLGGKDVVAYSQLFDKMKWKIGIVYPKETIDGLLNSTRNTVIIMACISLFV
CCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHH
GIVASYLFSRRLARPLQLLTNHVQKVAEGDLTLQMKVTSKDEVGELTNHFNHMVEQMNEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
VSKIKNSVSTVQQSTNNLHYLTNETVAASKEVSGAMDDVSGGASTLANSVDEVSEQLENM
HHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHH
IQSVEQMNSSVGEIKGVAGKAEEASKQGLNTMRNLVRTREQSSSIVVHTEEASGKLEQRV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHCCHHHHHH
GSIQNVVELIKGISDQTNLLALNASIEAARAGEQGKGFAVVAEEVRKLAEQSKEATVEIA
HHHHHHHHHHHCCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TMIGDVQVEVRRVVEVVSKLKDIADIQNNVTTEAEAEFRTIMSVVNIISTSVEQIVEEVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIGHEQGEITAVMHTIAGTSQESAAVSEEVNAATESQVNHLEKVAHTMESLTEHMRDLGR
HCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVEQFKIEE
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353924; 9384377 [H]