Click here to switch to the map view.

The map label for this gene is yhfC [H]

Identifier: 218906160

GI number: 218906160

Start: 4782018

End: 4782791

Strand: Direct

Name: yhfC [H]

Synonym: BCAH820_5072

Alternate gene names: 218906160

Gene position: 4782018-4782791 (Clockwise)

Preceding gene: 218906158

Following gene: 218906162

Centisome position: 90.18

GC content: 38.24

Gene sequence:

>774_bases
ATGGTTTCAAATACTGTAATTGCCAGCATCATCTTTCAACTCATTGTCTCGATTCTGGTCCCAATTATTGTACTCGTTTA
TTTCCGTAAAAAATATAATATAAATTGGAAAGTAGTCGGCGTTGGTGTTCTTATCTTTATCGGATTTACTCAAATTCTCG
AAACACCATTCCACCTATTTATGCGCGGTAATCCAGCAATCGCTCCAATTTTAGAAAATCCATTTGTCTTCGCACTGTAT
GGCGGACTCACTGCTGGTATTTTTGAAGAATTAGGACGCTTCGTTGCCTTCTTCTTCTTACTAAAAAAATATCAAGAATA
TAAAGATGGCTTCGCTTACGGAATTGGTCACGGCGGCATTGAATCCATTTTAGTTGGCGGATTCTCTGCATTCCAAGCAC
TTATATTTGCGAATTCAATTAACAACGGTAGCTTCGCTCAGATGGTAGAAAAAATGCCAGAGCTAAGCCGTCTACAGGAC
ATGTTAATTCAGCAACCTGCCTACTTATACTTCCTTGGTAGCTTAGAAAGAATTATGGCACTCGTGCTGCAAATTGCCTT
TACAATGCTTGTCTTATACGCAGTGAAGCAGAAGAAATATATCTTCCTTGTGTACGCTATACTATTCCATGCATTCGTAG
ATTTCTTCGCAGCACTTTACCAAACGAAAACAATCAACATCTTTGTTGCAGAAGGAATTACCCTTCTCTTTACCATTGGT
GCTGTTGTTCTTATTCGTAAAATGAAAGAGAAATTAATGAGTGTGCCAGAATAA

Upstream 100 bases:

>100_bases
AAAGTATGACGCAACGTTAGAGTCAATAAGTAAATTCATTTTCTTTATAAAATATTTCATGCATAATAGATATGTACATA
TATTAGAAAGCGGTGAAAAT

Downstream 100 bases:

>100_bases
AAATAACCCGCCAATTGGTGGGTTATTTTTTATACGAATTATCATAGTGATGATAGCTTTTCCCGCTTTGCAGTTCCCTC
TTTGTTTCTGCATCTATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MVSNTVIASIIFQLIVSILVPIIVLVYFRKKYNINWKVVGVGVLIFIGFTQILETPFHLFMRGNPAIAPILENPFVFALY
GGLTAGIFEELGRFVAFFFLLKKYQEYKDGFAYGIGHGGIESILVGGFSAFQALIFANSINNGSFAQMVEKMPELSRLQD
MLIQQPAYLYFLGSLERIMALVLQIAFTMLVLYAVKQKKYIFLVYAILFHAFVDFFAALYQTKTINIFVAEGITLLFTIG
AVVLIRKMKEKLMSVPE

Sequences:

>Translated_257_residues
MVSNTVIASIIFQLIVSILVPIIVLVYFRKKYNINWKVVGVGVLIFIGFTQILETPFHLFMRGNPAIAPILENPFVFALY
GGLTAGIFEELGRFVAFFFLLKKYQEYKDGFAYGIGHGGIESILVGGFSAFQALIFANSINNGSFAQMVEKMPELSRLQD
MLIQQPAYLYFLGSLERIMALVLQIAFTMLVLYAVKQKKYIFLVYAILFHAFVDFFAALYQTKTINIFVAEGITLLFTIG
AVVLIRKMKEKLMSVPE
>Mature_257_residues
MVSNTVIASIIFQLIVSILVPIIVLVYFRKKYNINWKVVGVGVLIFIGFTQILETPFHLFMRGNPAIAPILENPFVFALY
GGLTAGIFEELGRFVAFFFLLKKYQEYKDGFAYGIGHGGIESILVGGFSAFQALIFANSINNGSFAQMVEKMPELSRLQD
MLIQQPAYLYFLGSLERIMALVLQIAFTMLVLYAVKQKKYIFLVYAILFHAFVDFFAALYQTKTINIFVAEGITLLFTIG
AVVLIRKMKEKLMSVPE

Specific function: Unknown

COG id: COG4377

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011397 [H]

Pfam domain/function: PF10086 DUF2324 [H]

EC number: NA

Molecular weight: Translated: 28995; Mature: 28995

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSNTVIASIIFQLIVSILVPIIVLVYFRKKYNINWKVVGVGVLIFIGFTQILETPFHLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
MRGNPAIAPILENPFVFALYGGLTAGIFEELGRFVAFFFLLKKYQEYKDGFAYGIGHGGI
CCCCCCEEHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHH
ESILVGGFSAFQALIFANSINNGSFAQMVEKMPELSRLQDMLIQQPAYLYFLGSLERIMA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LVLQIAFTMLVLYAVKQKKYIFLVYAILFHAFVDFFAALYQTKTINIFVAEGITLLFTIG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHH
AVVLIRKMKEKLMSVPE
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVSNTVIASIIFQLIVSILVPIIVLVYFRKKYNINWKVVGVGVLIFIGFTQILETPFHLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
MRGNPAIAPILENPFVFALYGGLTAGIFEELGRFVAFFFLLKKYQEYKDGFAYGIGHGGI
CCCCCCEEHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHH
ESILVGGFSAFQALIFANSINNGSFAQMVEKMPELSRLQDMLIQQPAYLYFLGSLERIMA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LVLQIAFTMLVLYAVKQKKYIFLVYAILFHAFVDFFAALYQTKTINIFVAEGITLLFTIG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHH
AVVLIRKMKEKLMSVPE
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]