Click here to switch to the map view.

The map label for this gene is ybbK [H]

Identifier: 218906130

GI number: 218906130

Start: 4760938

End: 4761399

Strand: Direct

Name: ybbK [H]

Synonym: BCAH820_5042

Alternate gene names: 218906130

Gene position: 4760938-4761399 (Clockwise)

Preceding gene: 218906128

Following gene: 218906135

Centisome position: 89.78

GC content: 38.74

Gene sequence:

>462_bases
ATGATCGTAATTAGCGCTTGTTTAGGTGGTATTGCTTGTCGTTATGATGGAAACGACAATCTCATTTCAAAAATAGAGGA
GCTCCTGCAAAAAGAAGATACAGTCCTCATTTGTCCTGAAGTATTAGGAGGATTGCCAACGCCTCGTCCCTCAGCTGAGA
TTATTGGCGGGAATGGCGATGACGTTTTGGATGGAAAAGCAAAAGTGATGACAAAAGATGGTGAAGATGTCACGGAATCT
TTCGTGAGCGGTGCTTATAAAGCGCTAGAACAAATCAAAAATTTACACCCAGAATATATTATTTTGAAAGAACGTAGTCC
ATCTTGTGGTAGTTCTACCATTTACACGGGAGAATTTAACGGGAATAAACAAACTGGTTACGGGGTAACAACTGCTTTAT
TTAAAAGACACGGATTTACAGTCATTTCAGAAGAGGATTTTGAAAATCAAAAAAGGAATTGA

Upstream 100 bases:

>100_bases
TAAATTATATAAGCTTCCCATTTTTATCACCTCACTTATAAATAAGGGGTCGGAAGGGAATTTGGCGTGGTAATTAATAT
TTTTTATTGGAGATGAAAAT

Downstream 100 bases:

>100_bases
CCCTGTTCGTCAATTCCTTTTTTCTATCTTATTTTGCACCTAATTTTTCTTTCACTTTTGCAGGAAGCTCGTCTTTCTTT
ACTTCTTCCCAAGCTGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MIVISACLGGIACRYDGNDNLISKIEELLQKEDTVLICPEVLGGLPTPRPSAEIIGGNGDDVLDGKAKVMTKDGEDVTES
FVSGAYKALEQIKNLHPEYIILKERSPSCGSSTIYTGEFNGNKQTGYGVTTALFKRHGFTVISEEDFENQKRN

Sequences:

>Translated_153_residues
MIVISACLGGIACRYDGNDNLISKIEELLQKEDTVLICPEVLGGLPTPRPSAEIIGGNGDDVLDGKAKVMTKDGEDVTES
FVSGAYKALEQIKNLHPEYIILKERSPSCGSSTIYTGEFNGNKQTGYGVTTALFKRHGFTVISEEDFENQKRN
>Mature_153_residues
MIVISACLGGIACRYDGNDNLISKIEELLQKEDTVLICPEVLGGLPTPRPSAEIIGGNGDDVLDGKAKVMTKDGEDVTES
FVSGAYKALEQIKNLHPEYIILKERSPSCGSSTIYTGEFNGNKQTGYGVTTALFKRHGFTVISEEDFENQKRN

Specific function: Unknown

COG id: COG1683

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007553 [H]

Pfam domain/function: PF04463 DUF523 [H]

EC number: NA

Molecular weight: Translated: 16632; Mature: 16632

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVISACLGGIACRYDGNDNLISKIEELLQKEDTVLICPEVLGGLPTPRPSAEIIGGNGD
CEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCEEECHHHHCCCCCCCCCCEEECCCCC
DVLDGKAKVMTKDGEDVTESFVSGAYKALEQIKNLHPEYIILKERSPSCGSSTIYTGEFN
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECC
GNKQTGYGVTTALFKRHGFTVISEEDFENQKRN
CCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MIVISACLGGIACRYDGNDNLISKIEELLQKEDTVLICPEVLGGLPTPRPSAEIIGGNGD
CEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCEEECHHHHCCCCCCCCCCEEECCCCC
DVLDGKAKVMTKDGEDVTESFVSGAYKALEQIKNLHPEYIILKERSPSCGSSTIYTGEFN
CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECC
GNKQTGYGVTTALFKRHGFTVISEEDFENQKRN
CCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]