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The map label for this gene is yfiS [H]

Identifier: 218906128

GI number: 218906128

Start: 4758713

End: 4759960

Strand: Direct

Name: yfiS [H]

Synonym: BCAH820_5040

Alternate gene names: 218906128

Gene position: 4758713-4759960 (Clockwise)

Preceding gene: 218906127

Following gene: 218906130

Centisome position: 89.74

GC content: 37.98

Gene sequence:

>1248_bases
ATGGAGGAACTACAACAAAATAAATCTGCTTTAGAAGGAAGCGGAAAACCGTTATTAAAAAATACGAATTTCCTTTTTCT
TTGGGCAGCTACTCTTTTTTCAAGTTTCGCTTTAGCCTTTTTTACTTTTTCACAAACGTGGTACATAGCAAAAACATTAA
ACCTTGAGGCATCACTCGGTGTTGTTTTCGTAGCTCTTAGTGTTCCAAGGCTTATTTTTATGATTATCGGCGGCGCTGTA
GCAGATAAATTCCCGAAAAAAAACATTATGTTTTATTCTAATATTATTCGTGCTATTCTCGTCGCAACCATCCTCACATG
GTTCATCGTAGGTGACGTAACACTATATACATTTGCTTTATTCGCTTTATTCTTTGGGCTTGCTGATGCTTTTTTCTGGT
CAGCTGATGGATCTATCTTGCCTGAACTTGTAGAAAAAAGCCGTTTAACACAAGCAAACTCACTTACACAAATGACAAAC
CAAGCATCGGTCATATTAGGCCCTGTACTTGGCGGCATTCTTATCAAATTTACGAACTATGAAACGATTTTCTCGATTAC
AATTTTATTACTCATTGTCGCAGCCATACTCGTTCAAAAAATACAATTTACGATGCCAGAGCAGCAAAATACAGACAAGG
GCATGTTTACTTCTATTAAAGAAGGGATCTTATATGTAAAGGAATCTCCATTCCTTTCAACTTTCCTTATTTGTAGTGCA
TTTTTAAACTTATTCTTAATCGGTCCGATGCAAGTCGGTTTCCCGCTTTTCGTTAAAAATGTTCTACACGGTGATTCGCT
TCAGTTTAGTTACTTAGAAGCATCTGTCGGCGGCGGAATGGCAATAGGCGCTGTCATTGTCGGTTTAAAAAATATTAATC
GTAGACGCGGTCTATTTTGCATTATCATGATGCTACTGTCTGGTGTATTCTTCTTATCTATCAACTTTAGCACTGTACTA
TGGCAAGCGTTATTAGCCGGCATGTTTTACGGTATTACAATTGCAATGGCTATCGTTCCGCTTATGGCGATGATTCAATC
GACAGTAAAAGAAGAAATGATGGGGCGAGTAATGAGTTTACTTATGCTATCATCAATGGGCTTTATCCCGCTCTCTTATG
CATTCACATCAATCGCGCTTGCAATAGGAATTCCAATTGTAACCGTTATGAAAAGTGGTGCAATCGCCGTTATCGTCTTT
GTACTATTTGTAGCGATTCGCGTTCCAGTTGTAAGAAAGTTTGATTAA

Upstream 100 bases:

>100_bases
GTCTACAATGAGAAAGTGCAGTATAGAAATATTAGAAACTGTATAAATTGATTGTTAACAAGTTTTTTAGTTTAAATTTG
TCACATAGAAAGGAAGCAAT

Downstream 100 bases:

>100_bases
CTACTTGGAGTCATGCATTTACGCATGGCTCCTTTTTAAACGGATCAAATAACGATATCCCCTTACTTCTTCTCAGTGCT
GCTCCCCATTCTAATCCAAC

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MEELQQNKSALEGSGKPLLKNTNFLFLWAATLFSSFALAFFTFSQTWYIAKTLNLEASLGVVFVALSVPRLIFMIIGGAV
ADKFPKKNIMFYSNIIRAILVATILTWFIVGDVTLYTFALFALFFGLADAFFWSADGSILPELVEKSRLTQANSLTQMTN
QASVILGPVLGGILIKFTNYETIFSITILLLIVAAILVQKIQFTMPEQQNTDKGMFTSIKEGILYVKESPFLSTFLICSA
FLNLFLIGPMQVGFPLFVKNVLHGDSLQFSYLEASVGGGMAIGAVIVGLKNINRRRGLFCIIMMLLSGVFFLSINFSTVL
WQALLAGMFYGITIAMAIVPLMAMIQSTVKEEMMGRVMSLLMLSSMGFIPLSYAFTSIALAIGIPIVTVMKSGAIAVIVF
VLFVAIRVPVVRKFD

Sequences:

>Translated_415_residues
MEELQQNKSALEGSGKPLLKNTNFLFLWAATLFSSFALAFFTFSQTWYIAKTLNLEASLGVVFVALSVPRLIFMIIGGAV
ADKFPKKNIMFYSNIIRAILVATILTWFIVGDVTLYTFALFALFFGLADAFFWSADGSILPELVEKSRLTQANSLTQMTN
QASVILGPVLGGILIKFTNYETIFSITILLLIVAAILVQKIQFTMPEQQNTDKGMFTSIKEGILYVKESPFLSTFLICSA
FLNLFLIGPMQVGFPLFVKNVLHGDSLQFSYLEASVGGGMAIGAVIVGLKNINRRRGLFCIIMMLLSGVFFLSINFSTVL
WQALLAGMFYGITIAMAIVPLMAMIQSTVKEEMMGRVMSLLMLSSMGFIPLSYAFTSIALAIGIPIVTVMKSGAIAVIVF
VLFVAIRVPVVRKFD
>Mature_415_residues
MEELQQNKSALEGSGKPLLKNTNFLFLWAATLFSSFALAFFTFSQTWYIAKTLNLEASLGVVFVALSVPRLIFMIIGGAV
ADKFPKKNIMFYSNIIRAILVATILTWFIVGDVTLYTFALFALFFGLADAFFWSADGSILPELVEKSRLTQANSLTQMTN
QASVILGPVLGGILIKFTNYETIFSITILLLIVAAILVQKIQFTMPEQQNTDKGMFTSIKEGILYVKESPFLSTFLICSA
FLNLFLIGPMQVGFPLFVKNVLHGDSLQFSYLEASVGGGMAIGAVIVGLKNINRRRGLFCIIMMLLSGVFFLSINFSTVL
WQALLAGMFYGITIAMAIVPLMAMIQSTVKEEMMGRVMSLLMLSSMGFIPLSYAFTSIALAIGIPIVTVMKSGAIAVIVF
VLFVAIRVPVVRKFD

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45613; Mature: 45613

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELQQNKSALEGSGKPLLKNTNFLFLWAATLFSSFALAFFTFSQTWYIAKTLNLEASLG
CCHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHH
VVFVALSVPRLIFMIIGGAVADKFPKKNIMFYSNIIRAILVATILTWFIVGDVTLYTFAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALFFGLADAFFWSADGSILPELVEKSRLTQANSLTQMTNQASVILGPVLGGILIKFTNY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCH
ETIFSITILLLIVAAILVQKIQFTMPEQQNTDKGMFTSIKEGILYVKESPFLSTFLICSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCEEEEECCCHHHHHHHHHH
FLNLFLIGPMQVGFPLFVKNVLHGDSLQFSYLEASVGGGMAIGAVIVGLKNINRRRGLFC
HHHHHHHCCHHHCHHHHHHHHHCCCCCEEHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH
IIMMLLSGVFFLSINFSTVLWQALLAGMFYGITIAMAIVPLMAMIQSTVKEEMMGRVMSL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLSSMGFIPLSYAFTSIALAIGIPIVTVMKSGAIAVIVFVLFVAIRVPVVRKFD
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MEELQQNKSALEGSGKPLLKNTNFLFLWAATLFSSFALAFFTFSQTWYIAKTLNLEASLG
CCHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHH
VVFVALSVPRLIFMIIGGAVADKFPKKNIMFYSNIIRAILVATILTWFIVGDVTLYTFAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALFFGLADAFFWSADGSILPELVEKSRLTQANSLTQMTNQASVILGPVLGGILIKFTNY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCH
ETIFSITILLLIVAAILVQKIQFTMPEQQNTDKGMFTSIKEGILYVKESPFLSTFLICSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCEEEEECCCHHHHHHHHHH
FLNLFLIGPMQVGFPLFVKNVLHGDSLQFSYLEASVGGGMAIGAVIVGLKNINRRRGLFC
HHHHHHHCCHHHCHHHHHHHHHCCCCCEEHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH
IIMMLLSGVFFLSINFSTVLWQALLAGMFYGITIAMAIVPLMAMIQSTVKEEMMGRVMSL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLSSMGFIPLSYAFTSIALAIGIPIVTVMKSGAIAVIVFVLFVAIRVPVVRKFD
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]