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The map label for this gene is bioYB [H]

Identifier: 218906116

GI number: 218906116

Start: 4736791

End: 4737384

Strand: Direct

Name: bioYB [H]

Synonym: BCAH820_5028

Alternate gene names: 218906116

Gene position: 4736791-4737384 (Clockwise)

Preceding gene: 218906115

Following gene: 218906119

Centisome position: 89.33

GC content: 39.56

Gene sequence:

>594_bases
ATGAGAAGATTTCATGTTTTAGATTTAGCATTAGCCGCCATGTTCGTCGCTCTTATGGCCATTGGTGCAAATATTGTATC
TTGGGCACCATTCCTGCAAGTAGCGGGCATCCCATTATCTATGCAACCATTTTTCGCAATTTTAGCAGGGCTTCTTCTTG
GAAGTAGACTTGGTGCATTATCAATGACTGTTTACATGCTCGTTGGAGTAGCAGGTGCACCAATCTTCGCTAACTTCAAA
GCTGGATTTGGAGCACTTTTAGATCCTACTGGTGGCTTTATTATTGCATTTATTATCGTTGCTTACGTATCAGGAAAACT
AGTAGAACAAAAGAAAAAACCGACATTCAGTACATTTGCAATTGCTTCGTTCACAGGAATCATTTTAACGTATATTATCG
GTACTACTTATATGTACGGGGCAGTCAACCTCTTCATGGGTGGCAAGATGAGTTATAAAGCTGCATGGATGATTATGATG
TGGTTTGCAGTAAAAGATATTGTGTTTACAATAATCGGTGCTATTATCGCACCTCGCATATACTATGCTGTACGTCGTTC
TGCTTATCAGCATTCTCATTCGACGATTTCATAA

Upstream 100 bases:

>100_bases
GAGAGTATTTGAAGCCTTCTTATCAAAATATTTTAATTGACAACAAGTAAATAGTTTCGCTACGATAATGTTAACCTAAA
AACAACAGGAGGTTAACATT

Downstream 100 bases:

>100_bases
TAAAAAAGAGTTATCTTACTATGTTAAGATAACTCTTTTTTTATATTAAGACTCTTGATTCGTTTGTTCTTCTAAAATTT
TCTTCATCATCGTAACCATG

Product: bioY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRRFHVLDLALAAMFVALMAIGANIVSWAPFLQVAGIPLSMQPFFAILAGLLLGSRLGALSMTVYMLVGVAGAPIFANFK
AGFGALLDPTGGFIIAFIIVAYVSGKLVEQKKKPTFSTFAIASFTGIILTYIIGTTYMYGAVNLFMGGKMSYKAAWMIMM
WFAVKDIVFTIIGAIIAPRIYYAVRRSAYQHSHSTIS

Sequences:

>Translated_197_residues
MRRFHVLDLALAAMFVALMAIGANIVSWAPFLQVAGIPLSMQPFFAILAGLLLGSRLGALSMTVYMLVGVAGAPIFANFK
AGFGALLDPTGGFIIAFIIVAYVSGKLVEQKKKPTFSTFAIASFTGIILTYIIGTTYMYGAVNLFMGGKMSYKAAWMIMM
WFAVKDIVFTIIGAIIAPRIYYAVRRSAYQHSHSTIS
>Mature_197_residues
MRRFHVLDLALAAMFVALMAIGANIVSWAPFLQVAGIPLSMQPFFAILAGLLLGSRLGALSMTVYMLVGVAGAPIFANFK
AGFGALLDPTGGFIIAFIIVAYVSGKLVEQKKKPTFSTFAIASFTGIILTYIIGTTYMYGAVNLFMGGKMSYKAAWMIMM
WFAVKDIVFTIIGAIIAPRIYYAVRRSAYQHSHSTIS

Specific function: Putative biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 21345; Mature: 21345

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFHVLDLALAAMFVALMAIGANIVSWAPFLQVAGIPLSMQPFFAILAGLLLGSRLGAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SMTVYMLVGVAGAPIFANFKAGFGALLDPTGGFIIAFIIVAYVSGKLVEQKKKPTFSTFA
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IASFTGIILTYIIGTTYMYGAVNLFMGGKMSYKAAWMIMMWFAVKDIVFTIIGAIIAPRI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYAVRRSAYQHSHSTIS
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRRFHVLDLALAAMFVALMAIGANIVSWAPFLQVAGIPLSMQPFFAILAGLLLGSRLGAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SMTVYMLVGVAGAPIFANFKAGFGALLDPTGGFIIAFIIVAYVSGKLVEQKKKPTFSTFA
HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IASFTGIILTYIIGTTYMYGAVNLFMGGKMSYKAAWMIMMWFAVKDIVFTIIGAIIAPRI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYAVRRSAYQHSHSTIS
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]