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The map label for this gene is racX [H]

Identifier: 218905985

GI number: 218905985

Start: 4607636

End: 4608310

Strand: Direct

Name: racX [H]

Synonym: BCAH820_4873

Alternate gene names: 218905985

Gene position: 4607636-4608310 (Clockwise)

Preceding gene: 218905984

Following gene: 218905986

Centisome position: 86.89

GC content: 39.41

Gene sequence:

>675_bases
ATGATTGGAATACTAGCAGGAATGGGGCCAAAATCAACTGGACCATTCATCGATACAGTTGTAGCAGAGTGCCAAACAAT
ATACGGAGCAAAGCATGACATGGACTTTCCTCATATGATGATCTATTCGTGCCCAACACCGTTTTACATGGATCGCCCTA
TTGATCATGAAGCGATGAAAAAAGCGATTATTGAAGGAGCACAAAAACTCGAGAGTACTGGCGCAAGCTTTATCGCTATG
CCTTGCAATACAGCGCATCTTTATTTTGAAGAATTACAGCAATCTCTTTCTATTCCTATTTTGAATATAGTTGATGAAAC
GTTAAAAGCGATTCCTGAAACTGCAAAAAGAGTCGCTCTTCTTGCAACAGAAGCTACTGTTCAATCTGGGATTTACCAAG
ACGGGATTGCAAAGCGTAATATAGAGTACATTCATTACGAACAATGGCAGGAAAGCATTAATCAAATTATTACTTATATT
AAATCTGGAGAGGTTGAAGAAGCTCGCGAATTGTGGAGTGCCCTCGTTTTACAATTGAAAGATGAAGTTGATACTGCAAT
TATCGCATGTACCGATTTGAATGTGTTGGCGAGTGAGGATTTTGTTGATTCCTCTCAATGTCTTGCGAAAGCAGTTGTTA
GGATGTATGTAGAAAATATAAGGGGGTCCCAATGA

Upstream 100 bases:

>100_bases
TTATCGACAAAAGATAACAAAAAAAGACGTGCGCTCATTGCACGTCTTTTTGTTATTCTCCTATATAATGGATATATTAC
ATATTAAAGGAGACGAAACA

Downstream 100 bases:

>100_bases
ATATACCTTTTGAAATGGGATATACGTTTGATAAAAACCTTAGAGAAAAACCTTTATCCCTTGTTGAAATGAAGCAAGGG
ATTGTACTTTTGAAAGAGCA

Product: probable amino-acid racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MIGILAGMGPKSTGPFIDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMKKAIIEGAQKLESTGASFIAM
PCNTAHLYFEELQQSLSIPILNIVDETLKAIPETAKRVALLATEATVQSGIYQDGIAKRNIEYIHYEQWQESINQIITYI
KSGEVEEARELWSALVLQLKDEVDTAIIACTDLNVLASEDFVDSSQCLAKAVVRMYVENIRGSQ

Sequences:

>Translated_224_residues
MIGILAGMGPKSTGPFIDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMKKAIIEGAQKLESTGASFIAM
PCNTAHLYFEELQQSLSIPILNIVDETLKAIPETAKRVALLATEATVQSGIYQDGIAKRNIEYIHYEQWQESINQIITYI
KSGEVEEARELWSALVLQLKDEVDTAIIACTDLNVLASEDFVDSSQCLAKAVVRMYVENIRGSQ
>Mature_224_residues
MIGILAGMGPKSTGPFIDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMKKAIIEGAQKLESTGASFIAM
PCNTAHLYFEELQQSLSIPILNIVDETLKAIPETAKRVALLATEATVQSGIYQDGIAKRNIEYIHYEQWQESINQIITYI
KSGEVEEARELWSALVLQLKDEVDTAIIACTDLNVLASEDFVDSSQCLAKAVVRMYVENIRGSQ

Specific function: Probable aspartate or glutamate racemase involved in peptidoglycan modification during cortex synthesis [H]

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 24942; Mature: 24942

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00923 ASP_GLU_RACEMASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGILAGMGPKSTGPFIDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK
CCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHH
KAIIEGAQKLESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVDETLKAIPETAKRVAL
HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LATEATVQSGIYQDGIAKRNIEYIHYEQWQESINQIITYIKSGEVEEARELWSALVLQLK
HHHHHHHHHCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DEVDTAIIACTDLNVLASEDFVDSSQCLAKAVVRMYVENIRGSQ
HHHHHEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIGILAGMGPKSTGPFIDTVVAECQTIYGAKHDMDFPHMMIYSCPTPFYMDRPIDHEAMK
CCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHH
KAIIEGAQKLESTGASFIAMPCNTAHLYFEELQQSLSIPILNIVDETLKAIPETAKRVAL
HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LATEATVQSGIYQDGIAKRNIEYIHYEQWQESINQIITYIKSGEVEEARELWSALVLQLK
HHHHHHHHHCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DEVDTAIIACTDLNVLASEDFVDSSQCLAKAVVRMYVENIRGSQ
HHHHHEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491712; 9384377 [H]