Click here to switch to the map view.

The map label for this gene is ytcJ [H]

Identifier: 218905873

GI number: 218905873

Start: 4507650

End: 4509218

Strand: Reverse

Name: ytcJ [H]

Synonym: BCAH820_4761

Alternate gene names: 218905873

Gene position: 4509218-4507650 (Counterclockwise)

Preceding gene: 218905874

Following gene: 218905871

Centisome position: 85.04

GC content: 39.39

Gene sequence:

>1569_bases
ATGGGGGAAATTTGGTATGGCGGCAACATTTACACGATGAGGGAAGAAAATGAAAAAGTAGAAGCTATTTATGTTGAAAA
TGGCAGGATCGTTGATAATGGAAGGAAAGAAGAGTTAGAAAACCGATATGCTGTGGCTAAATTGCACGATTTAAAAGGCA
AAACGATGATTCCAGGCCTCGTTGATAGCCATATGCATCTTATTGGTCACGGGGAGAGATTACTTCGTTTAGATTTATCA
AATTGCACATCTTATAGCGAAGTGCTGACTCTCGTTCGGAGGCGAGTAGAAGAAGCGCCGAAAGGTTCTTGGATTATCGG
AGAGGGCTGGAATGAAAATAACTTTAAGGATACGAAAGATGTTCACGCAAAAGATTTAGATGCAATTTCAAGAGAACATC
CCATTTTATTAAAGCGCGTTTGTCGCCATGTTACATGGGTGAACTCATACATACTGCAAGAAGCGAACATAACAGAAAAG
GCAAAAGATCCAAAAGGCGGGAAAGTTGGACGGGACTCATTCAATAAATTAACAGGACTTTTATATGAACAAGGCCAAGA
GTTAATCAAACATGTCCAGCCTGAAATTGATGAAGCCTACTTACAAAGAGCTTTGCAAACAGCAATTAAAGACTGCTGGC
AATATGGACTCGTTGGCGGGCATACGGAAGATTTAAATTATTACGGTGGATTTAGAAAAACGCATAATGCGTTTTCTCAT
GTTATAAAAGAAATGCCATTTAAAGCACATTTACTCGTTCACCATGAAGTAGCACATGAACGAAAAGAATATGAAAATGA
GCATTATATTGAGTTTGGGGCAATGAAAATTTTTTCTGACGGTTCTTTTGGCGGAAGAACAGCTTTATTAAGTGAACCGT
ATGAAGATGCGAAGGAAACGAATGGGGTTGCGATTTTCTCACGTGAAGAACTTGCGGAGTTAGTGAAAAAAGCACGAGAC
TTACATATGCCAGTTGCGATTCATACTATCGGTGACTTATCGCTTGAATATGTCATTGATGCACTTGAATTGTATCCGCC
AGCAGAAGGATTACGTGACCGCATTATTCATTGTCAGCTAGCTCGTGAAGATTTGATTGAAAGAATGAAAAACTTACAAG
CCATTATTGATATACAACCAGTCTTTGTTTCATCGGATTTTCCATCAGTCATTGAAAAACTGGGCGAGCAACGTCTTCGT
TATGCGTACGCTTGGAAGACGTTACTGGAGGCAGGATTACACTGTAACGGGGGATCAGATGCTCCGATTGAGCAAGTGAA
TCCGTTTCTAGGCATATATAGCGCTGTTACACGTAGAAGTTTTATTGACGGTTTATGTTATATGCCAGAAGAAAGATTAA
CGGTATATGAGGCTGTTTCTTTATTTACAACAGGAAGTGCCTATGCAATTGGAAAAGAAGCGAAGCGAGGGCAAATTACA
AAAGGATATGAGGCAGACTTTACAATATTAGACCGCGATATTTTTGAAATAGAGGCAGAAGAAATAAAAGAAGTACAGGC
AGAAATGACCGTAATAGATGGCCAAGTCGTCTATAGAAAAGATTCATAA

Upstream 100 bases:

>100_bases
AGTTACAACGTCTACTACTGAACAAAAGTAATGTTTAGAAAAGCACCATGTTTTGAAATGGTGCTTTTTTTTATACAATA
AAACAAAGGAGATGAAATAT

Downstream 100 bases:

>100_bases
AAATATATGAGCGATTATCGGAATATATCGACCGTAACTCGAAATATATGAGCGATTATTGAAATATATCGACTTACCGA
CAAAAATTGACAAGAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MGEIWYGGNIYTMREENEKVEAIYVENGRIVDNGRKEELENRYAVAKLHDLKGKTMIPGLVDSHMHLIGHGERLLRLDLS
NCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKDVHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEK
AKDPKGGKVGRDSFNKLTGLLYEQGQELIKHVQPEIDEAYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDAKETNGVAIFSREELAELVKKARD
LHMPVAIHTIGDLSLEYVIDALELYPPAEGLRDRIIHCQLAREDLIERMKNLQAIIDIQPVFVSSDFPSVIEKLGEQRLR
YAYAWKTLLEAGLHCNGGSDAPIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKDS

Sequences:

>Translated_522_residues
MGEIWYGGNIYTMREENEKVEAIYVENGRIVDNGRKEELENRYAVAKLHDLKGKTMIPGLVDSHMHLIGHGERLLRLDLS
NCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKDVHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEK
AKDPKGGKVGRDSFNKLTGLLYEQGQELIKHVQPEIDEAYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDAKETNGVAIFSREELAELVKKARD
LHMPVAIHTIGDLSLEYVIDALELYPPAEGLRDRIIHCQLAREDLIERMKNLQAIIDIQPVFVSSDFPSVIEKLGEQRLR
YAYAWKTLLEAGLHCNGGSDAPIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKDS
>Mature_521_residues
GEIWYGGNIYTMREENEKVEAIYVENGRIVDNGRKEELENRYAVAKLHDLKGKTMIPGLVDSHMHLIGHGERLLRLDLSN
CTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKDVHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEKA
KDPKGGKVGRDSFNKLTGLLYEQGQELIKHVQPEIDEAYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSHV
IKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDAKETNGVAIFSREELAELVKKARDL
HMPVAIHTIGDLSLEYVIDALELYPPAEGLRDRIIHCQLAREDLIERMKNLQAIIDIQPVFVSSDFPSVIEKLGEQRLRY
AYAWKTLLEAGLHCNGGSDAPIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQITK
GYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKDS

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 59522; Mature: 59391

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEIWYGGNIYTMREENEKVEAIYVENGRIVDNGRKEELENRYAVAKLHDLKGKTMIPGL
CCCEEECCEEEEECCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCEECCCH
VDSHMHLIGHGERLLRLDLSNCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKD
HHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHH
VHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEKAKDPKGGKVGRDSFNKLTGL
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHH
LYEQGQELIKHVQPEIDEAYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDAKET
HHHHCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEECCCCHHHHHHC
NGVAIFSREELAELVKKARDLHMPVAIHTIGDLSLEYVIDALELYPPAEGLRDRIIHCQL
CCEEEECHHHHHHHHHHHHHCCCCEEEEEHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AREDLIERMKNLQAIIDIQPVFVSSDFPSVIEKLGEQRLRYAYAWKTLLEAGLHCNGGSD
HHHHHHHHHHHHHHHEEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKDS
CCCCCCEEEECCHHHHCCHHHHHHHHHHHEEECCEEEEECCC
>Mature Secondary Structure 
GEIWYGGNIYTMREENEKVEAIYVENGRIVDNGRKEELENRYAVAKLHDLKGKTMIPGL
CCEEECCEEEEECCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCEECCCH
VDSHMHLIGHGERLLRLDLSNCTSYSEVLTLVRRRVEEAPKGSWIIGEGWNENNFKDTKD
HHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHH
VHAKDLDAISREHPILLKRVCRHVTWVNSYILQEANITEKAKDPKGGKVGRDSFNKLTGL
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHH
LYEQGQELIKHVQPEIDEAYLQRALQTAIKDCWQYGLVGGHTEDLNYYGGFRKTHNAFSH
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
VIKEMPFKAHLLVHHEVAHERKEYENEHYIEFGAMKIFSDGSFGGRTALLSEPYEDAKET
HHHHCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEECCCCHHHHHHC
NGVAIFSREELAELVKKARDLHMPVAIHTIGDLSLEYVIDALELYPPAEGLRDRIIHCQL
CCEEEECHHHHHHHHHHHHHCCCCEEEEEHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AREDLIERMKNLQAIIDIQPVFVSSDFPSVIEKLGEQRLRYAYAWKTLLEAGLHCNGGSD
HHHHHHHHHHHHHHHEEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
APIEQVNPFLGIYSAVTRRSFIDGLCYMPEERLTVYEAVSLFTTGSAYAIGKEAKRGQIT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
KGYEADFTILDRDIFEIEAEEIKEVQAEMTVIDGQVVYRKDS
CCCCCCEEEECCHHHHCCHHHHHHHHHHHEEECCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]