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The map label for this gene is ydbB [H]

Identifier: 218905851

GI number: 218905851

Start: 4490048

End: 4490380

Strand: Reverse

Name: ydbB [H]

Synonym: BCAH820_4739

Alternate gene names: 218905851

Gene position: 4490380-4490048 (Counterclockwise)

Preceding gene: 218905852

Following gene: 218905850

Centisome position: 84.68

GC content: 31.53

Gene sequence:

>333_bases
ATGGAAAAAATAAATTTAATAGAGCTAACAAAAGACATTAAAGATCAACATAAAAACTTCGTCGTTTCAAATGTAAATAG
TCATTGCTTACGAATCGCTGTATTTACTGGCGAATATGATTGGCACTATCATTCTAATTCGGATGAATTATTTATTGTAC
TAGAGGGAGAATTACTTATCGATTTTGAAGATGGAGAAACAGTGGTATTAAAGCCAAATGATTCTATTTTAATTCCAGCG
TGTACGATTCATAGAACGAGAGCATTAAAGAGAACGGTAAATCTTTGTTTTGAACATATAGAGGCTGATACGATTAAAGT
GGAGCAATTATGA

Upstream 100 bases:

>100_bases
TTTTTGATTTCAGAATATGGGATTTTTTTCTTGTTAGTAAAATGCCTCTTATGCTAATTTTAAGATAAGTATATAAAGGG
GTGTAAAGGGGAGAGATTCT

Downstream 100 bases:

>100_bases
AAAAATTATCTGTAGCCGAGTATAGAAAAATCCTTCCGATTTTAGAAAGTCATACAAAAACGACGACGTTTGCTTATGCG
GTATGTGATCAAGTGATAGA

Product: YdbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MEKINLIELTKDIKDQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGELLIDFEDGETVVLKPNDSILIPA
CTIHRTRALKRTVNLCFEHIEADTIKVEQL

Sequences:

>Translated_110_residues
MEKINLIELTKDIKDQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGELLIDFEDGETVVLKPNDSILIPA
CTIHRTRALKRTVNLCFEHIEADTIKVEQL
>Mature_110_residues
MEKINLIELTKDIKDQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGELLIDFEDGETVVLKPNDSILIPA
CTIHRTRALKRTVNLCFEHIEADTIKVEQL

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SchB/CurC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR019780
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 12736; Mature: 12736

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKINLIELTKDIKDQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGELLI
CCCCEEEEEHHHHHHHCCCEEEECCCCCEEEEEEEECCEEEEEECCCCCEEEEEECCEEE
DFEDGETVVLKPNDSILIPACTIHRTRALKRTVNLCFEHIEADTIKVEQL
EECCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MEKINLIELTKDIKDQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGELLI
CCCCEEEEEHHHHHHHCCCEEEECCCCCEEEEEEEECCEEEEEECCCCCEEEEEECCEEE
DFEDGETVVLKPNDSILIPACTIHRTRALKRTVNLCFEHIEADTIKVEQL
EECCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]