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The map label for this gene is ykuI [H]

Identifier: 218905122

GI number: 218905122

Start: 3835673

End: 3836890

Strand: Reverse

Name: ykuI [H]

Synonym: BCAH820_4006

Alternate gene names: 218905122

Gene position: 3836890-3835673 (Counterclockwise)

Preceding gene: 218905123

Following gene: 218905121

Centisome position: 72.36

GC content: 29.56

Gene sequence:

>1218_bases
TTGATAGATGCATTAGATGTAATGAGTAACTTGGATAAAGTCCTTCCTTATTATCAAGCAATTTTTAGTGCTGATGAACA
TACTGTAATTGGATATGAAGTAGTAGGGCGTATTCAAACAGAAGAGGGCATACAAAGTTTAGCTTCTTTCTTTCATGATG
ACTCTATTCCAAGTGAGTTTCAACTAGAAGCGGATAACATTATAGTAGAAAAAGCTTTAAATCGTTATTTAGAAAGTGAT
CAAAAACTATTATTATTTATACATCGGAATGCTAACGTATTAATGAACGATGATGATGAAAGTTTACTTCAACTTTTATT
AATGTATGAAAAACAAGGTTTAAATTTGAAAAACATTGTTTTAGAAATTACAGAACATGAATGTAAAGAAGATATAGAGC
AATTTAATCATTTGCTTATGTATTATCGTACATATGGTATTCAAATTTCGATTAATAAAGTCGGAACAGGTACAAGTAAT
TTAGAGCGTATTAGCGTGTTAGCACCTGATATTTTAAAAGTAGATTTAACAAATTTAAGGCAAACTGCACTTTTACAATC
TTATCAAGATATTTTATATTCTTTATCATTACTTGCTAGAAGAATTGGTGCGACATTGTTATATGAAGAAATAGATGCTT
TTTATCAATTACAATATGCTTGGAAAAACGGTGGTAGATACTATCAAGGAAATTATTTAAAAGAATGTTTACCTGATTTT
ATTGAAACGAACGTTTTGAAAGAGCGACTTGGTAATGAGTGTCATCAATTTATTCAACATGAGAAGAAGAAGTTACAAAA
AATTTATAATTTAACAGAAATGTTACGCGATCGAATTGGTGATGTTCTAGCGAAACAGAAAAAGAATGAAGATATAAATG
ATTGGTTATTACAATTTAGCCAAAGTGTATCACAGTGTAGTTTTCGCATATTTATTTGTAACGAAGATGGTTTCCAACAA
TCAGGAAACGTTATGAAAAAAGATGGGGAATGGATTGTGATGCCTGAGTATTACATGAAGAACTGGAGTTGGCGCCCGTA
TTTTCTAGAAAATATTATGAAAATGCGTTTTGAGAATAAGGCAAGACTTTCAGATTTATATGCTGATATTGAAACTGGTG
AGATGGTACGAACATTTTCTTTCCCAATTGATGATGAAAACTTTTTATTTATAGATTTATCGTATGAATATTTATATGAG
GAAGATGTTTTATTTTAA

Upstream 100 bases:

>100_bases
TTTACCCCTCTAATCCCTTCAGGAAAACTGAAGGGATTTTTTATTATTTTTCCGTAAATATCATGTTATAATTTTTGAAA
AGTAAAGGGAGGGAAGCACG

Downstream 100 bases:

>100_bases
TGCACGAAGAGATTCGTGCATTTTTTGTTTGTTTTTATCATAAATTGGTAATAGTGAAAATGGTGCTGAAAATGCTGTCT
ATCGTTGTAAAGATTTTACG

Product: EAL-domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MIDALDVMSNLDKVLPYYQAIFSADEHTVIGYEVVGRIQTEEGIQSLASFFHDDSIPSEFQLEADNIIVEKALNRYLESD
QKLLLFIHRNANVLMNDDDESLLQLLLMYEKQGLNLKNIVLEITEHECKEDIEQFNHLLMYYRTYGIQISINKVGTGTSN
LERISVLAPDILKVDLTNLRQTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGNYLKECLPDF
IETNVLKERLGNECHQFIQHEKKKLQKIYNLTEMLRDRIGDVLAKQKKNEDINDWLLQFSQSVSQCSFRIFICNEDGFQQ
SGNVMKKDGEWIVMPEYYMKNWSWRPYFLENIMKMRFENKARLSDLYADIETGEMVRTFSFPIDDENFLFIDLSYEYLYE
EDVLF

Sequences:

>Translated_405_residues
MIDALDVMSNLDKVLPYYQAIFSADEHTVIGYEVVGRIQTEEGIQSLASFFHDDSIPSEFQLEADNIIVEKALNRYLESD
QKLLLFIHRNANVLMNDDDESLLQLLLMYEKQGLNLKNIVLEITEHECKEDIEQFNHLLMYYRTYGIQISINKVGTGTSN
LERISVLAPDILKVDLTNLRQTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGNYLKECLPDF
IETNVLKERLGNECHQFIQHEKKKLQKIYNLTEMLRDRIGDVLAKQKKNEDINDWLLQFSQSVSQCSFRIFICNEDGFQQ
SGNVMKKDGEWIVMPEYYMKNWSWRPYFLENIMKMRFENKARLSDLYADIETGEMVRTFSFPIDDENFLFIDLSYEYLYE
EDVLF
>Mature_405_residues
MIDALDVMSNLDKVLPYYQAIFSADEHTVIGYEVVGRIQTEEGIQSLASFFHDDSIPSEFQLEADNIIVEKALNRYLESD
QKLLLFIHRNANVLMNDDDESLLQLLLMYEKQGLNLKNIVLEITEHECKEDIEQFNHLLMYYRTYGIQISINKVGTGTSN
LERISVLAPDILKVDLTNLRQTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGNYLKECLPDF
IETNVLKERLGNECHQFIQHEKKKLQKIYNLTEMLRDRIGDVLAKQKKNEDINDWLLQFSQSVSQCSFRIFICNEDGFQQ
SGNVMKKDGEWIVMPEYYMKNWSWRPYFLENIMKMRFENKARLSDLYADIETGEMVRTFSFPIDDENFLFIDLSYEYLYE
EDVLF

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633
- InterPro:   IPR018842 [H]

Pfam domain/function: PF00563 EAL; PF10388 YkuI_C [H]

EC number: NA

Molecular weight: Translated: 47770; Mature: 47770

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDALDVMSNLDKVLPYYQAIFSADEHTVIGYEVVGRIQTEEGIQSLASFFHDDSIPSEF
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
QLEADNIIVEKALNRYLESDQKLLLFIHRNANVLMNDDDESLLQLLLMYEKQGLNLKNIV
EECHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCHHHHH
LEITEHECKEDIEQFNHLLMYYRTYGIQISINKVGTGTSNLERISVLAPDILKVDLTNLR
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHH
QTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGNYLKECLPDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
IETNVLKERLGNECHQFIQHEKKKLQKIYNLTEMLRDRIGDVLAKQKKNEDINDWLLQFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
QSVSQCSFRIFICNEDGFQQSGNVMKKDGEWIVMPEYYMKNWSWRPYFLENIMKMRFENK
HHHHHCEEEEEEECCCCCCCCCCCEECCCCEEEECHHHHCCCCCCHHHHHHHHHHHHCCH
ARLSDLYADIETGEMVRTFSFPIDDENFLFIDLSYEYLYEEDVLF
HHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHCCCCC
>Mature Secondary Structure
MIDALDVMSNLDKVLPYYQAIFSADEHTVIGYEVVGRIQTEEGIQSLASFFHDDSIPSEF
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
QLEADNIIVEKALNRYLESDQKLLLFIHRNANVLMNDDDESLLQLLLMYEKQGLNLKNIV
EECHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCHHHHH
LEITEHECKEDIEQFNHLLMYYRTYGIQISINKVGTGTSNLERISVLAPDILKVDLTNLR
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHH
QTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGNYLKECLPDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
IETNVLKERLGNECHQFIQHEKKKLQKIYNLTEMLRDRIGDVLAKQKKNEDINDWLLQFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
QSVSQCSFRIFICNEDGFQQSGNVMKKDGEWIVMPEYYMKNWSWRPYFLENIMKMRFENK
HHHHHCEEEEEEECCCCCCCCCCCEECCCCEEEECHHHHCCCCCCHHHHHHHHHHHHCCH
ARLSDLYADIETGEMVRTFSFPIDDENFLFIDLSYEYLYEEDVLF
HHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]