Click here to switch to the map view.

The map label for this gene is 218904623

Identifier: 218904623

GI number: 218904623

Start: 3333710

End: 3334423

Strand: Direct

Name: 218904623

Synonym: BCAH820_3507

Alternate gene names: NA

Gene position: 3333710-3334423 (Clockwise)

Preceding gene: 218904621

Following gene: 218904625

Centisome position: 62.87

GC content: 41.46

Gene sequence:

>714_bases
ATGAGCGAAAAATATATTATTTTACACGGAACTGCTCTCGAACCAAATTTAATTGGCCCCACACTACCACCAATTCCACC
ATTTACATTTCCGAACGGACCTACTGGAATCACAGGACCTACCGGTGCGACAGGTTTTACTGGAATTGGCATTACTGGTC
CTACTGGGGTTACAGGACCTACCGGAATTGGCATTACTGGTCCTACTGGGGTTACAGGACCTACCGGAATTGGCATTACT
GGTCCCACTGGAGTTACAGGACCTACCGGAATTGGCATTACTGGTCCCACTGGAGCAACCGGTTTAGGGATTCTTCCCGT
ATTTGGAACAATAACTACTGACGTAGGTATTGGTTTTTCAGTAATAGTTAATACAAATATTAATTTTACCCTTCCAGGAC
CTGTTAGTGGAACTACTCTAAATCCAGTAGACAACTCCATTATAATTAATACTACTGGTGTATACTCAGTATCGTTTTCA
ATCGTATTTGTGATACAAGCTATTTCGTCTAGTATATTAAATCTTACAATAAACGATTCAATTCAATTCGCAATTGAATC
ACGAATTGGTGGTGGTCCTGGGGTTAGAGCTACATCCGCCAGAACTGATCTATTATCTTTAAACCAAGGAGATGTTCTTC
GAGTACGAATAAGAGAAGCCACGGGTGACATTATTTATTCCAACGCATCCCTTGTTGTCTCAAAAGTCGACTAG

Upstream 100 bases:

>100_bases
TTTCATTTCAAATTAAATAAGTGCCTCCGCTATTGTGAATGTCATTTACTCTCCCTACTACATTTAATAATTATGACAAG
CAATCATAGGAGGTTACTAC

Downstream 100 bases:

>100_bases
TTCATTTATTAAAATAACGATTTAGGAATGATAACAATATAAAAAGAAGAGGAAAACTTATATTTCAGTCTACCTCTTCT
TTTCTATTAACAATTCACTG

Product: collagen triple helix repeat protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSEKYIILHGTALEPNLIGPTLPPIPPFTFPNGPTGITGPTGATGFTGIGITGPTGVTGPTGIGITGPTGVTGPTGIGIT
GPTGVTGPTGIGITGPTGATGLGILPVFGTITTDVGIGFSVIVNTNINFTLPGPVSGTTLNPVDNSIIINTTGVYSVSFS
IVFVIQAISSSILNLTINDSIQFAIESRIGGGPGVRATSARTDLLSLNQGDVLRVRIREATGDIIYSNASLVVSKVD

Sequences:

>Translated_237_residues
MSEKYIILHGTALEPNLIGPTLPPIPPFTFPNGPTGITGPTGATGFTGIGITGPTGVTGPTGIGITGPTGVTGPTGIGIT
GPTGVTGPTGIGITGPTGATGLGILPVFGTITTDVGIGFSVIVNTNINFTLPGPVSGTTLNPVDNSIIINTTGVYSVSFS
IVFVIQAISSSILNLTINDSIQFAIESRIGGGPGVRATSARTDLLSLNQGDVLRVRIREATGDIIYSNASLVVSKVD
>Mature_236_residues
SEKYIILHGTALEPNLIGPTLPPIPPFTFPNGPTGITGPTGATGFTGIGITGPTGVTGPTGIGITGPTGVTGPTGIGITG
PTGVTGPTGIGITGPTGATGLGILPVFGTITTDVGIGFSVIVNTNINFTLPGPVSGTTLNPVDNSIIINTTGVYSVSFSI
VFVIQAISSSILNLTINDSIQFAIESRIGGGPGVRATSARTDLLSLNQGDVLRVRIREATGDIIYSNASLVVSKVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23653; Mature: 23522

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKYIILHGTALEPNLIGPTLPPIPPFTFPNGPTGITGPTGATGFTGIGITGPTGVTGP
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
TGIGITGPTGVTGPTGIGITGPTGVTGPTGIGITGPTGATGLGILPVFGTITTDVGIGFS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEHEEEECCCCCCEE
VIVNTNINFTLPGPVSGTTLNPVDNSIIINTTGVYSVSFSIVFVIQAISSSILNLTINDS
EEEECCEEEEECCCCCCCEECCCCCEEEEECCCEEEEHHHHHHHHHHHHCCEEEEEECCC
IQFAIESRIGGGPGVRATSARTDLLSLNQGDVLRVRIREATGDIIYSNASLVVSKVD
EEEEEEECCCCCCCCEECCCCCEEEECCCCCEEEEEEEECCCCEEEECCEEEEEECC
>Mature Secondary Structure 
SEKYIILHGTALEPNLIGPTLPPIPPFTFPNGPTGITGPTGATGFTGIGITGPTGVTGP
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
TGIGITGPTGVTGPTGIGITGPTGVTGPTGIGITGPTGATGLGILPVFGTITTDVGIGFS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEHEEEECCCCCCEE
VIVNTNINFTLPGPVSGTTLNPVDNSIIINTTGVYSVSFSIVFVIQAISSSILNLTINDS
EEEECCEEEEECCCCCCCEECCCCCEEEEECCCEEEEHHHHHHHHHHHHCCEEEEEECCC
IQFAIESRIGGGPGVRATSARTDLLSLNQGDVLRVRIREATGDIIYSNASLVVSKVD
EEEEEEECCCCCCCCEECCCCCEEEECCCCCEEEEEEEECCCCEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA