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The map label for this gene is tsr [C]

Identifier: 218904398

GI number: 218904398

Start: 3125067

End: 3127049

Strand: Reverse

Name: tsr [C]

Synonym: BCAH820_3282

Alternate gene names: 218904398

Gene position: 3127049-3125067 (Counterclockwise)

Preceding gene: 218904399

Following gene: 218904394

Centisome position: 58.97

GC content: 33.33

Gene sequence:

>1983_bases
GTGTTTAAAATAAAAGAAAGATTGGAACAAATGAAGCTTAAAACGAAGTTGTCTATGGCATTTATTGCAATATTAATTAT
ACCAAGTCTTATCGTAGGAGTATCGTCTTATGATAAAGCAAAAACAGATCTTAATGAAACAATTCTACAAACTGCGAAAG
ATAATGTGAGTATTTTAAATAAGATAGTTGATGATGAATTAGAAAATAAACATGTAGATGTAACTCATTTTGCAAAGATA
CTTACACAAGGTGATTATAACGCTGACCAATTGCAAAATGTGCAAGGTAAATTTGATCAATATATACAGTTACATCCAGA
GATAGAAACAATTTATACTACATCTAGTAATAATCAATTTATTCATGCGCCCGTTGGAAAAATACCTGAAGGATTTAACC
CATTAGAAAGTAGTTGGTATAAGGATGCAGTAAAAGCTAATGGAGAGATTATTGTTTCGTCTCCCTATAAATCAAAGGCT
ACAGGCAATATGGTAATAGCAATTGCAAAGCAAAATGCTGATAAAAGTGGTGTCATTGGTGTGGACTTGAATATTAATGA
TATCGTAAAAACTTCTAAAATGATAAAAATAGGAAAACAAGGATTTGTATCTATAGTAAGTCAAGATAAGACTATAGTTG
TTCATCCTACACTTAAGCCAGGTGAGAAATTAGAGAAATCATTAGCAGATGAACTATACAAGAAAGAAGATGGAGTAATT
ACTTATAGCCTTAATGGTGAGGATCGAAACATAAGCTTTAAAACAAACAAAAAAACAGGCTGGAAAATAGCTGGTGTAAT
GCCTATTAAAGAAATTGAAGAAGCTACCAATCCTATTTTTTATAAAACGCTCACTATAATAGGGGCTTCATTGTTGTTAG
GTGGAATTGTAATTTTCTTCATTCTTAAATCTATTATTAATCCATTAAGACAATTAGTTATTTCAGCTCAAAGAATTAGT
CGTGGAGATTTAACTGAGAAAATAAATATTCGTTCAAAGGATGAACTTGGTCAATTAGGTGGTAGTTTCAATACAATGGC
AGAGTCTTTACGTAATATAATTTCTCAAATTAACACATCTGCAGGACATGTGGCTGCTTCATCTGAGGAACTAACCGCTA
GCGTAGAGCAAGCCAGTGTTGCGACAGAACAAATTACAAAAGAAATGGAAGAAATATCGAATAGTGCAGAAGTTCAAAAT
AATGAAGTGGCGTCTGGAGCGAAATTAATTGGTGAGGTAACACGAAACATTCAATGCGTAGCTGATAATGCTTCTGAAGT
ATCGGCTTCATCCTTATACACAAAACAAAAAGCCAATGAGGGTGAACAATTAGTAGAACAAACTGTAAAGCAAATGCAGT
CAATCCATCATTCTGTTTCTCAATCTGATAATGTAATTAAATTATTAGATAAGAAATCGCAGCAAATCGGAAGTATATTA
GAAGTAATTCAAAATATTGCAGCACAAACAAATTTATTAGCATTGAATGCAGCGATTGAAGCGGCAAGGGCAGGAGAACA
GGGGCGTGGCTTTGCAATTGTCGCCGATGAAGTCAGGAAGTTAGCGGAGCAATCATCCGAATCTTCAATGGAAATTGGAA
GTTTAATTAATGAAATACAAGCAGATGTACATGAGACTGTAAAAGCTATGAATGAAGTAGGAGTTGAAGTGCAGTCAGGG
ATTCAGGTTGCGAATGATACAAAACAAAGTTTTTATGAAATTTCAAAATCTGCAAATGATATCGTGTCAAAAGTACATGG
TATGGTGGAATTATCAAATAAAATGACAAGTGATGTAATGGAAGTTGATACATCAATTAATCAAATATCTATGGCTGTGA
AAGAGAATTCTTCAAGTATGCAAACGATAGCCGGTTCATCTGAAGAACAACATGCTTCTATGGAAGAGATAAATTCTTCA
GCAATACAATTAGCACAGATGGCCGAAGAACTTCAAGAATTAATTGGTGGATTTAAGATATAA

Upstream 100 bases:

>100_bases
TTTCATTTTGAATAATTCCATAAATGAATGTAGAAAAAATAAAGGAGCAAACGATTAAATAAACTAAATCAGTTGTAAGA
ATGAAAGGGAGAAGTAGAGA

Downstream 100 bases:

>100_bases
GTTCAGAATCTAGGATAGAATCCTAGATAGTGTGTTTAAGGATAGAAGTTAAAAATCTTATAATGATAAAAGGAGCAAAT
TAATTTGCTCCTTTTTCACT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MFKIKERLEQMKLKTKLSMAFIAILIIPSLIVGVSSYDKAKTDLNETILQTAKDNVSILNKIVDDELENKHVDVTHFAKI
LTQGDYNADQLQNVQGKFDQYIQLHPEIETIYTTSSNNQFIHAPVGKIPEGFNPLESSWYKDAVKANGEIIVSSPYKSKA
TGNMVIAIAKQNADKSGVIGVDLNINDIVKTSKMIKIGKQGFVSIVSQDKTIVVHPTLKPGEKLEKSLADELYKKEDGVI
TYSLNGEDRNISFKTNKKTGWKIAGVMPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLRQLVISAQRIS
RGDLTEKINIRSKDELGQLGGSFNTMAESLRNIISQINTSAGHVAASSEELTASVEQASVATEQITKEMEEISNSAEVQN
NEVASGAKLIGEVTRNIQCVADNASEVSASSLYTKQKANEGEQLVEQTVKQMQSIHHSVSQSDNVIKLLDKKSQQIGSIL
EVIQNIAAQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAMNEVGVEVQSG
IQVANDTKQSFYEISKSANDIVSKVHGMVELSNKMTSDVMEVDTSINQISMAVKENSSSMQTIAGSSEEQHASMEEINSS
AIQLAQMAEELQELIGGFKI

Sequences:

>Translated_660_residues
MFKIKERLEQMKLKTKLSMAFIAILIIPSLIVGVSSYDKAKTDLNETILQTAKDNVSILNKIVDDELENKHVDVTHFAKI
LTQGDYNADQLQNVQGKFDQYIQLHPEIETIYTTSSNNQFIHAPVGKIPEGFNPLESSWYKDAVKANGEIIVSSPYKSKA
TGNMVIAIAKQNADKSGVIGVDLNINDIVKTSKMIKIGKQGFVSIVSQDKTIVVHPTLKPGEKLEKSLADELYKKEDGVI
TYSLNGEDRNISFKTNKKTGWKIAGVMPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLRQLVISAQRIS
RGDLTEKINIRSKDELGQLGGSFNTMAESLRNIISQINTSAGHVAASSEELTASVEQASVATEQITKEMEEISNSAEVQN
NEVASGAKLIGEVTRNIQCVADNASEVSASSLYTKQKANEGEQLVEQTVKQMQSIHHSVSQSDNVIKLLDKKSQQIGSIL
EVIQNIAAQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAMNEVGVEVQSG
IQVANDTKQSFYEISKSANDIVSKVHGMVELSNKMTSDVMEVDTSINQISMAVKENSSSMQTIAGSSEEQHASMEEINSS
AIQLAQMAEELQELIGGFKI
>Mature_660_residues
MFKIKERLEQMKLKTKLSMAFIAILIIPSLIVGVSSYDKAKTDLNETILQTAKDNVSILNKIVDDELENKHVDVTHFAKI
LTQGDYNADQLQNVQGKFDQYIQLHPEIETIYTTSSNNQFIHAPVGKIPEGFNPLESSWYKDAVKANGEIIVSSPYKSKA
TGNMVIAIAKQNADKSGVIGVDLNINDIVKTSKMIKIGKQGFVSIVSQDKTIVVHPTLKPGEKLEKSLADELYKKEDGVI
TYSLNGEDRNISFKTNKKTGWKIAGVMPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLRQLVISAQRIS
RGDLTEKINIRSKDELGQLGGSFNTMAESLRNIISQINTSAGHVAASSEELTASVEQASVATEQITKEMEEISNSAEVQN
NEVASGAKLIGEVTRNIQCVADNASEVSASSLYTKQKANEGEQLVEQTVKQMQSIHHSVSQSDNVIKLLDKKSQQIGSIL
EVIQNIAAQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAMNEVGVEVQSG
IQVANDTKQSFYEISKSANDIVSKVHGMVELSNKMTSDVMEVDTSINQISMAVKENSSSMQTIAGSSEEQHASMEEINSS
AIQLAQMAEELQELIGGFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=273, Percent_Identity=34.0659340659341, Blast_Score=130, Evalue=4e-31,
Organism=Escherichia coli, GI1788195, Length=317, Percent_Identity=29.9684542586751, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1787690, Length=393, Percent_Identity=29.5165394402036, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1788194, Length=371, Percent_Identity=29.6495956873315, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI1789453, Length=366, Percent_Identity=26.5027322404372, Blast_Score=99, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72021; Mature: 72021

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKIKERLEQMKLKTKLSMAFIAILIIPSLIVGVSSYDKAKTDLNETILQTAKDNVSILN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHH
KIVDDELENKHVDVTHFAKILTQGDYNADQLQNVQGKFDQYIQLHPEIETIYTTSSNNQF
HHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCEEEEEEECCCCEE
IHAPVGKIPEGFNPLESSWYKDAVKANGEIIVSSPYKSKATGNMVIAIAKQNADKSGVIG
EECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCEEE
VDLNINDIVKTSKMIKIGKQGFVSIVSQDKTIVVHPTLKPGEKLEKSLADELYKKEDGVI
EECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEE
TYSLNGEDRNISFKTNKKTGWKIAGVMPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFF
EEEECCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ILKSIINPLRQLVISAQRISRGDLTEKINIRSKDELGQLGGSFNTMAESLRNIISQINTS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCC
AGHVAASSEELTASVEQASVATEQITKEMEEISNSAEVQNNEVASGAKLIGEVTRNIQCV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEE
ADNASEVSASSLYTKQKANEGEQLVEQTVKQMQSIHHSVSQSDNVIKLLDKKSQQIGSIL
ECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EVIQNIAAQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHH
ADVHETVKAMNEVGVEVQSGIQVANDTKQSFYEISKSANDIVSKVHGMVELSNKMTSDVM
HHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVDTSINQISMAVKENSSSMQTIAGSSEEQHASMEEINSSAIQLAQMAEELQELIGGFKI
HHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFKIKERLEQMKLKTKLSMAFIAILIIPSLIVGVSSYDKAKTDLNETILQTAKDNVSILN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHH
KIVDDELENKHVDVTHFAKILTQGDYNADQLQNVQGKFDQYIQLHPEIETIYTTSSNNQF
HHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCEEEEEEECCCCEE
IHAPVGKIPEGFNPLESSWYKDAVKANGEIIVSSPYKSKATGNMVIAIAKQNADKSGVIG
EECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCEEE
VDLNINDIVKTSKMIKIGKQGFVSIVSQDKTIVVHPTLKPGEKLEKSLADELYKKEDGVI
EECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEE
TYSLNGEDRNISFKTNKKTGWKIAGVMPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFF
EEEECCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ILKSIINPLRQLVISAQRISRGDLTEKINIRSKDELGQLGGSFNTMAESLRNIISQINTS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCC
AGHVAASSEELTASVEQASVATEQITKEMEEISNSAEVQNNEVASGAKLIGEVTRNIQCV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEE
ADNASEVSASSLYTKQKANEGEQLVEQTVKQMQSIHHSVSQSDNVIKLLDKKSQQIGSIL
ECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EVIQNIAAQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHH
ADVHETVKAMNEVGVEVQSGIQVANDTKQSFYEISKSANDIVSKVHGMVELSNKMTSDVM
HHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVDTSINQISMAVKENSSSMQTIAGSSEEQHASMEEINSSAIQLAQMAEELQELIGGFKI
HHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA