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The map label for this gene is yhjR [H]

Identifier: 218904232

GI number: 218904232

Start: 2949017

End: 2949451

Strand: Reverse

Name: yhjR [H]

Synonym: BCAH820_3116

Alternate gene names: 218904232

Gene position: 2949451-2949017 (Counterclockwise)

Preceding gene: 218904233

Following gene: 218904231

Centisome position: 55.62

GC content: 33.56

Gene sequence:

>435_bases
ATGTATAGTTCGAATTATTATGATTGGTATAGGCAAAATGATAAGCTGATTCGTGATATTGAGAAAGCAATTAACGGAGA
GTTTAGTGCTATAAATTGTTACGCGAAATTAGCTAACATGGCTCCAAATACGGTAGAACGAAATCAAATTCTTGAAATTC
GTAATGATGAAATAAAGCATTTTCATCAGTTTGTACAGATCTATACAAATTTAACTGGTCAGCAGCCAAAACCACAAATT
ACAGAAGAATGTTCGAATACGTACTTACAAGGATTAGAATTCACCATACAAGATGAACAGAAGACAGTGGATTTTTATTT
GGAAATTGCAGATGAGACATCAGATACACATTTGAAAGAGTTACTGCGTAGAATAGCTGCCGATGAACAAAATCATGCGG
TGTGGTTTTTATATTACTTTGTGAAAACGAAGTGA

Upstream 100 bases:

>100_bases
ATAGGGAGATGAAGAGTTCTTATTTGTGGTTCATTTTGTATACATGCTCCTACTATTTCAAATTGCATAAAGTGTTATGT
GAAATAATGGAGGGGATATG

Downstream 100 bases:

>100_bases
GTGTTTAAGGAATTAAAACCGTTTCACTAGTAGTGAGACGGTTTTTTTGAATACAAGCTGTAAAATAGATATCTTGAAAG
TGTAGTGGTTCATTTTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MYSSNYYDWYRQNDKLIRDIEKAINGEFSAINCYAKLANMAPNTVERNQILEIRNDEIKHFHQFVQIYTNLTGQQPKPQI
TEECSNTYLQGLEFTIQDEQKTVDFYLEIADETSDTHLKELLRRIAADEQNHAVWFLYYFVKTK

Sequences:

>Translated_144_residues
MYSSNYYDWYRQNDKLIRDIEKAINGEFSAINCYAKLANMAPNTVERNQILEIRNDEIKHFHQFVQIYTNLTGQQPKPQI
TEECSNTYLQGLEFTIQDEQKTVDFYLEIADETSDTHLKELLRRIAADEQNHAVWFLYYFVKTK
>Mature_144_residues
MYSSNYYDWYRQNDKLIRDIEKAINGEFSAINCYAKLANMAPNTVERNQILEIRNDEIKHFHQFVQIYTNLTGQQPKPQI
TEECSNTYLQGLEFTIQDEQKTVDFYLEIADETSDTHLKELLRRIAADEQNHAVWFLYYFVKTK

Specific function: Unknown

COG id: COG1633

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 17186; Mature: 17186

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSSNYYDWYRQNDKLIRDIEKAINGEFSAINCYAKLANMAPNTVERNQILEIRNDEIKH
CCCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHH
FHQFVQIYTNLTGQQPKPQITEECSNTYLQGLEFTIQDEQKTVDFYLEIADETSDTHLKE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEEEHEEEECCCCCCHHHHH
LLRRIAADEQNHAVWFLYYFVKTK
HHHHHHCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MYSSNYYDWYRQNDKLIRDIEKAINGEFSAINCYAKLANMAPNTVERNQILEIRNDEIKH
CCCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHH
FHQFVQIYTNLTGQQPKPQITEECSNTYLQGLEFTIQDEQKTVDFYLEIADETSDTHLKE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEEEHEEEECCCCCCHHHHH
LLRRIAADEQNHAVWFLYYFVKTK
HHHHHHCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]