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The map label for this gene is sipU [H]

Identifier: 218904220

GI number: 218904220

Start: 2938145

End: 2938696

Strand: Reverse

Name: sipU [H]

Synonym: BCAH820_3104

Alternate gene names: 218904220

Gene position: 2938696-2938145 (Counterclockwise)

Preceding gene: 218904221

Following gene: 218904219

Centisome position: 55.42

GC content: 35.14

Gene sequence:

>552_bases
ATGAAGGAAAATACGAAGAAAGAATTATTCTCATGGGCGAAAACGATAGGATTTACCCTTGTATTAATCGTAATTATTCG
CGGTGTTTTATTTACACCGTCATTAGTACAAGGCGAATCGATGATGCCGACTTTAGAAAATAACGAACGAGTTCTCGTCA
ATAAGATTGGTTATAGTATAAGTGGATTAGAACGCTTTGATATTATTGTTTTCCATGGAAAAGAAGGATATGATTTAGTA
AAACGAGTAATTGGTTTACCAGGCGATACAGTTGAGTATAAAAATGATGTTTTATATGTAAACGGCAAAGCGATGGAAGA
ACCATATTTAAAAGAGTTTAAAGAAAAAGCAGCAGGTCGTGTATTAACTCCAGACTTTACGTTAGAACAAATTACAGGAA
AAACGAAAGTGCCAGAAGGCCAAGTGTTTGTATTAGGTGATAATCGTGAAGTTTCTAAAGACGGTCGTATGTTTGGATTT
ATTTCAGAAGATGAAATTGTCGGAAAAGGACAAGCTGTTTTCTGGCCGTTGAAACAAGTAAGAGCGCTATAA

Upstream 100 bases:

>100_bases
CGGTAAGAGAAGGGAAATCATGTTTTGCTGAAATTGATCCTAATTTAGTACAAGAATTAGTTCAAATCATACAATAAACA
ATTAAGAAAGAGGAGAAACG

Downstream 100 bases:

>100_bases
AGAAAGAAGTATGGGAGAAATATTCTTCCATACTTTTTTTATGCCCATTTATTTAAACGTTTGGTTTTGCTATAACTTGA
GCTTTTGAAAGAGAACCATC

Product: Signal peptidase I U

Products: NA

Alternate protein names: SPase I; Leader peptidase I [H]

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKENTKKELFSWAKTIGFTLVLIVIIRGVLFTPSLVQGESMMPTLENNERVLVNKIGYSISGLERFDIIVFHGKEGYDLV
KRVIGLPGDTVEYKNDVLYVNGKAMEEPYLKEFKEKAAGRVLTPDFTLEQITGKTKVPEGQVFVLGDNREVSKDGRMFGF
ISEDEIVGKGQAVFWPLKQVRAL

Sequences:

>Translated_183_residues
MKENTKKELFSWAKTIGFTLVLIVIIRGVLFTPSLVQGESMMPTLENNERVLVNKIGYSISGLERFDIIVFHGKEGYDLV
KRVIGLPGDTVEYKNDVLYVNGKAMEEPYLKEFKEKAAGRVLTPDFTLEQITGKTKVPEGQVFVLGDNREVSKDGRMFGF
ISEDEIVGKGQAVFWPLKQVRAL
>Mature_183_residues
MKENTKKELFSWAKTIGFTLVLIVIIRGVLFTPSLVQGESMMPTLENNERVLVNKIGYSISGLERFDIIVFHGKEGYDLV
KRVIGLPGDTVEYKNDVLYVNGKAMEEPYLKEFKEKAAGRVLTPDFTLEQITGKTKVPEGQVFVLGDNREVSKDGRMFGF
ISEDEIVGKGQAVFWPLKQVRAL

Specific function: Unknown

COG id: COG0681

COG function: function code U; Signal peptidase I

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S26 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000223
- InterPro:   IPR019758
- InterPro:   IPR019757
- InterPro:   IPR019756
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF00717 Peptidase_S24 [H]

EC number: =3.4.21.89 [H]

Molecular weight: Translated: 20620; Mature: 20620

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00501 SPASE_I_1 ; PS00760 SPASE_I_2 ; PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENTKKELFSWAKTIGFTLVLIVIIRGVLFTPSLVQGESMMPTLENNERVLVNKIGYSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
SGLERFDIIVFHGKEGYDLVKRVIGLPGDTVEYKNDVLYVNGKAMEEPYLKEFKEKAAGR
CCCCEEEEEEEECCCCHHHHHHHHCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHCCC
VLTPDFTLEQITGKTKVPEGQVFVLGDNREVSKDGRMFGFISEDEIVGKGQAVFWPLKQV
EECCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHH
RAL
HCC
>Mature Secondary Structure
MKENTKKELFSWAKTIGFTLVLIVIIRGVLFTPSLVQGESMMPTLENNERVLVNKIGYSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
SGLERFDIIVFHGKEGYDLVKRVIGLPGDTVEYKNDVLYVNGKAMEEPYLKEFKEKAAGR
CCCCEEEEEEEECCCCHHHHHHHHCCCCCCEEECCCEEEECCCCCCCHHHHHHHHHHCCC
VLTPDFTLEQITGKTKVPEGQVFVLGDNREVSKDGRMFGFISEDEIVGKGQAVFWPLKQV
EECCCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHH
RAL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8801417 [H]