Click here to switch to the map view.

The map label for this gene is ycdQ [C]

Identifier: 218904134

GI number: 218904134

Start: 2853325

End: 2854821

Strand: Direct

Name: ycdQ [C]

Synonym: BCAH820_3018

Alternate gene names: 218904134

Gene position: 2853325-2854821 (Clockwise)

Preceding gene: 218904132

Following gene: 218904140

Centisome position: 53.81

GC content: 32.2

Gene sequence:

>1497_bases
ATGTGTAAAAATCCGATTTCTATTATTATTCGTATACAGCATAACATAAGAGTTTTACCTGAAATTTTGAAAGCCTGTGA
ACAACTACAGCCTTTAGAAATCATCCTTACTATTAACGGCTATATCGATGATTCCATTGATATTGCAAAATCTTACAATT
GTAAAATTATCAAACTAGAAAAACCGACAGAACCAAATAATTGTTATGTAATTGGTGCCAAAAAAGCAAAGGGTAAGTAC
CTCTTATTTTTAGATGCAAATTACATTATTCACCCTTCCTTACTTATACCATTTCTTCAACCATTACTAGACGAATCAGC
TGACGTAGTATTAAACAATTTAGATGATTTTTTTTATCAAAAGCAAAAGCCCACTATAGAAATGATTTGGCAGCAAGTCA
CGAATCATTTTTTTCATCGTCCAGATTTAAATATTAACTCATTATTATTTCCTCCCTATGCAATAACAAAAGAAATTCTT
GAAGCTATTAATCCAGAAAGTTTATTAAATCCGATATTGGCACAAATGAAAATTATTAAAAATAAATTTCGCATTAGCAA
TCATTTTAAAATTGCTATACCGCAAATTCCCTCCTTCTCCTCAAAACAACTCAATTGTTACCACCTAGAAGCGATTGAAA
ATTGGGTAAATATATTACAAGATCCAAGGGGAAACTATACCGATAATAATCGAAGACGGGATATTATTTTAGAACTTCAA
AACGGCGAACAAAGAGCTATACCCAAAATAATTACAGGTAAAGAGTTTTATTCGAATACTTATGGAAATAAACAATTATC
CATCATTATCCCTGTTCAAAATGAAGAAAAAACGATAGAATCTATCATTTTTGAGGTGCAGAAATTAAAACCTTTAGAAA
TCATACTTATTGTTAATGGGTCAACAGATAAAACAGAGGAATTAGCGAAGAATTGCGGTGCAACAGTTATTACTTACAAA
GAAGTACTCGGCATTGATACCGGACGTGCCGTTGGTGCATATTTTGCAAAAGGTGATATATTATTATTTATCGATGGTGA
TTTCTTAATTCCTAGTTCTGATTTATTACCATTTGTACAATCTGTTCAAAATGGAACCGATTTAGCTTTAAATAAATTAG
AGCACTACTACATGTATCGTCTTCCTTATACTATAGTGACTGCATGTAAGTATGCTGTTAATTTAGCATGTAATCGAAAA
GATTTAGGTATGGGATCCACAACTGCTGTCCCTCATGCTTTTAGTCGAAAATGCATTGATACAATTGGTTTTCATTCACT
TCTTTCACCAACCTTAAGTCAAGTTAAAACAATTTTAGCAGGCTTGCATGTACAAAAAGTCCATTCTGTCGACGTTGACA
AGATAAATCGAGTTCGACCAGAAAAACACTTCTCTAAGGAAGGTTACCTTTCATTAGCAACACAGCAAATCATTGGTGAT
CATATAGAAGCAATTTATTACATCGCCGAACAAAAAAGAGGCACTGAATGCTTTTAA

Upstream 100 bases:

>100_bases
CTGATAAGACTAAATAGTCATTACGTATATAATAAAATATATATCTCCTATTTTATCTAATCTTATTAACAACTACCTCT
GATTAAAAAGGAGACTACTT

Downstream 100 bases:

>100_bases
TTGTATATCCTTACCACCAGATAATATATGAATTCAATATAAATATATAACAAAATAAAAAAGATGGTTTGTAACCATCT
TTTTTACCTTTACATGAATT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase/Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Glycoside Hydrolase Family 2 Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MCKNPISIIIRIQHNIRVLPEILKACEQLQPLEIILTINGYIDDSIDIAKSYNCKIIKLEKPTEPNNCYVIGAKKAKGKY
LLFLDANYIIHPSLLIPFLQPLLDESADVVLNNLDDFFYQKQKPTIEMIWQQVTNHFFHRPDLNINSLLFPPYAITKEIL
EAINPESLLNPILAQMKIIKNKFRISNHFKIAIPQIPSFSSKQLNCYHLEAIENWVNILQDPRGNYTDNNRRRDIILELQ
NGEQRAIPKIITGKEFYSNTYGNKQLSIIIPVQNEEKTIESIIFEVQKLKPLEIILIVNGSTDKTEELAKNCGATVITYK
EVLGIDTGRAVGAYFAKGDILLFIDGDFLIPSSDLLPFVQSVQNGTDLALNKLEHYYMYRLPYTIVTACKYAVNLACNRK
DLGMGSTTAVPHAFSRKCIDTIGFHSLLSPTLSQVKTILAGLHVQKVHSVDVDKINRVRPEKHFSKEGYLSLATQQIIGD
HIEAIYYIAEQKRGTECF

Sequences:

>Translated_498_residues
MCKNPISIIIRIQHNIRVLPEILKACEQLQPLEIILTINGYIDDSIDIAKSYNCKIIKLEKPTEPNNCYVIGAKKAKGKY
LLFLDANYIIHPSLLIPFLQPLLDESADVVLNNLDDFFYQKQKPTIEMIWQQVTNHFFHRPDLNINSLLFPPYAITKEIL
EAINPESLLNPILAQMKIIKNKFRISNHFKIAIPQIPSFSSKQLNCYHLEAIENWVNILQDPRGNYTDNNRRRDIILELQ
NGEQRAIPKIITGKEFYSNTYGNKQLSIIIPVQNEEKTIESIIFEVQKLKPLEIILIVNGSTDKTEELAKNCGATVITYK
EVLGIDTGRAVGAYFAKGDILLFIDGDFLIPSSDLLPFVQSVQNGTDLALNKLEHYYMYRLPYTIVTACKYAVNLACNRK
DLGMGSTTAVPHAFSRKCIDTIGFHSLLSPTLSQVKTILAGLHVQKVHSVDVDKINRVRPEKHFSKEGYLSLATQQIIGD
HIEAIYYIAEQKRGTECF
>Mature_498_residues
MCKNPISIIIRIQHNIRVLPEILKACEQLQPLEIILTINGYIDDSIDIAKSYNCKIIKLEKPTEPNNCYVIGAKKAKGKY
LLFLDANYIIHPSLLIPFLQPLLDESADVVLNNLDDFFYQKQKPTIEMIWQQVTNHFFHRPDLNINSLLFPPYAITKEIL
EAINPESLLNPILAQMKIIKNKFRISNHFKIAIPQIPSFSSKQLNCYHLEAIENWVNILQDPRGNYTDNNRRRDIILELQ
NGEQRAIPKIITGKEFYSNTYGNKQLSIIIPVQNEEKTIESIIFEVQKLKPLEIILIVNGSTDKTEELAKNCGATVITYK
EVLGIDTGRAVGAYFAKGDILLFIDGDFLIPSSDLLPFVQSVQNGTDLALNKLEHYYMYRLPYTIVTACKYAVNLACNRK
DLGMGSTTAVPHAFSRKCIDTIGFHSLLSPTLSQVKTILAGLHVQKVHSVDVDKINRVRPEKHFSKEGYLSLATQQIIGD
HIEAIYYIAEQKRGTECF

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56631; Mature: 56631

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKNPISIIIRIQHNIRVLPEILKACEQLQPLEIILTINGYIDDSIDIAKSYNCKIIKLE
CCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHCCCCEEEEEEE
KPTEPNNCYVIGAKKAKGKYLLFLDANYIIHPSLLIPFLQPLLDESADVVLNNLDDFFYQ
CCCCCCCEEEEECCCCCCCEEEEEECCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
KQKPTIEMIWQQVTNHFFHRPDLNINSLLFPPYAITKEILEAINPESLLNPILAQMKIIK
CCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
NKFRISNHFKIAIPQIPSFSSKQLNCYHLEAIENWVNILQDPRGNYTDNNRRRDIILELQ
HHHEECCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEC
NGEQRAIPKIITGKEFYSNTYGNKQLSIIIPVQNEEKTIESIIFEVQKLKPLEIILIVNG
CCCCCCCCHHCCCHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEC
STDKTEELAKNCGATVITYKEVLGIDTGRAVGAYFAKGDILLFIDGDFLIPSSDLLPFVQ
CCCHHHHHHHHCCCEEEEHHHHHCCCCCCHHHHEEECCCEEEEECCCEECCCHHHHHHHH
SVQNGTDLALNKLEHYYMYRLPYTIVTACKYAVNLACNRKDLGMGSTTAVPHAFSRKCID
HHCCCHHHHHHHHHHHEEEECHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHH
TIGFHSLLSPTLSQVKTILAGLHVQKVHSVDVDKINRVRPEKHFSKEGYLSLATQQIIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHH
HIEAIYYIAEQKRGTECF
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MCKNPISIIIRIQHNIRVLPEILKACEQLQPLEIILTINGYIDDSIDIAKSYNCKIIKLE
CCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHCCCCEEEEEEE
KPTEPNNCYVIGAKKAKGKYLLFLDANYIIHPSLLIPFLQPLLDESADVVLNNLDDFFYQ
CCCCCCCEEEEECCCCCCCEEEEEECCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
KQKPTIEMIWQQVTNHFFHRPDLNINSLLFPPYAITKEILEAINPESLLNPILAQMKIIK
CCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
NKFRISNHFKIAIPQIPSFSSKQLNCYHLEAIENWVNILQDPRGNYTDNNRRRDIILELQ
HHHEECCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEC
NGEQRAIPKIITGKEFYSNTYGNKQLSIIIPVQNEEKTIESIIFEVQKLKPLEIILIVNG
CCCCCCCCHHCCCHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEC
STDKTEELAKNCGATVITYKEVLGIDTGRAVGAYFAKGDILLFIDGDFLIPSSDLLPFVQ
CCCHHHHHHHHCCCEEEEHHHHHCCCCCCHHHHEEECCCEEEEECCCEECCCHHHHHHHH
SVQNGTDLALNKLEHYYMYRLPYTIVTACKYAVNLACNRKDLGMGSTTAVPHAFSRKCID
HHCCCHHHHHHHHHHHEEEECHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHH
TIGFHSLLSPTLSQVKTILAGLHVQKVHSVDVDKINRVRPEKHFSKEGYLSLATQQIIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHH
HIEAIYYIAEQKRGTECF
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA