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The map label for this gene is ykpA [H]

Identifier: 218904063

GI number: 218904063

Start: 2779276

End: 2780901

Strand: Reverse

Name: ykpA [H]

Synonym: BCAH820_2947

Alternate gene names: 218904063

Gene position: 2780901-2779276 (Counterclockwise)

Preceding gene: 218904064

Following gene: 218904062

Centisome position: 52.44

GC content: 36.9

Gene sequence:

>1626_bases
ATGATTACAGTAAGTAACGTTAGTTTGCGTTTCGCGGATCGCAAATTGTTTGAAGATGTTAACATAAAATTCACGCCAGG
TAACTGCTACGGTTTAATCGGAGCAAACGGTGCTGGTAAATCAACATTTCTAAAGATTTTATCTGGAGAAATCGAACCAT
CAACAGGTGACATACATATTACGCCAGGTGAGCGTCTAGCAGTATTAAAACAGAACCACTTCGAATACGAAGAGTTCCCA
GTATTAGAAACAGTAATTATGGGTCACACGCAACTTTATAAAGTAATGCAAGAGAAAAATGCCATTTACATGAAAGAAGA
CTTCAGTGATGAAGATGGTATGCGTGCTGCTGAACTTGAAGGTGAGTTCGCTGAGCTGAACGGTTGGGAAGCTGAGTCAG
AAGCTGCAATCTTACTAAAAGGACTTGGTATTGGTGAAGATCTTCATGATAAGAAATTGTCAGAATTAACTGGGGCAGAG
AAAGTAAAAGTATTACTTGCTCAAGCATTATTCGGTAAACCTGATATTCTATTACTAGATGAGCCTACCAACCACTTGGA
CTTAAAAGCGATCCAATGGTTAGAAAACTTCTTAATGAACTTTGAAAATACAGTTATCGTTGTATCCCATGACCGTCACT
TCTTAAATAAAGTATGTACGCACATGGCTGATCTTGATTTCGGTAAAATTCAACTTTATGTTGGTAACTATGACTTCTGG
TATGAGTCAAGCCAATTAGCTTTAAAATTAACGCAAGATGCTAATAAGAAAAAAGAAGAGAAAGTAAAAGAGTTACAAAA
CTTCATTGCGCGCTTTAGCTCAAACGCATCTAAAGCGAAACAAGCAACTTCTCGTAAAAAATTATTAGATAAAATTACTT
TAGATGATATTAGACCATCATCTCGTCGTTACCCATTCGTTGGCTTCACACCTGAGCGTGAAGTAGGAAATGACTTATTA
ACTGTTGAAGGTCTTTCTAAAACAATTGATGGCGAAAAAGTGTTAGATAATGTGTACTTCACTTTAAATAAAGGTGATAA
AGTTGCATTTATCGGTCGTAACGATATTGCAATGACAACATTATTTAAAATTCTTATGGGTGAAATGGAGCCAGATAGTG
GTTCATTCAAATGGGGCGTTACAACTTCTCAATCTTACTTCCCAAGAGATAACTCTAAGTACTTTGAGAACAGTGACCTC
AACTTAGTTGAATGGTTACGTCAATTCTCTCCACAAGATGAGTCAGAAAGCTTCTTACGTGGTTTCTTAGGCCGTATGTT
ATTCTCAGGTGAAGAAGTTAAGAAGAACGTTTCTGTATTATCTGGAGGCGAAAAAGTTCGTTGTATGTTATCTAAAATGA
TGTTAAGTGGTGCGAACGTAATCACACTTGACGACCCAACGAACCATTTAGACCTTGAGTCTATTACAGCACTAAACAAC
GGTTTAATCGCATTCAAAGGTACAATGTTATTCACATCTCATGACCATCAGTTCGTACAAACAATTGCAAACCGCATTAT
CGAAGTAACGCCAAACGGTGTAATCGATAAAGAGGCTACTTACGATGAGTTCTTAGAAAATGAAGAACTTCAAAAACAAG
TAGATGCAATGTACAAAGGTCAATAA

Upstream 100 bases:

>100_bases
ATAATAGCTATAGTCTACAATAATTGAGTCGTAATATGCGATTTTTTAAGACAATCGGTGAGAAAACGCTGAAATAAGCG
GTATTAGTAGGAGGACACAA

Downstream 100 bases:

>100_bases
TAAATGAGGAAAACCTCGCTCTCGTTTTGAGAGCGAGGTTTTTTTATAAACTTTATTTTATGGATTGTGAATAATTATTC
AAAAATAATTTTATTGAAGG

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAE
KVKVLLAQALFGKPDILLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDL
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
GLIAFKGTMLFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKGQ

Sequences:

>Translated_541_residues
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAE
KVKVLLAQALFGKPDILLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDL
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
GLIAFKGTMLFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKGQ
>Mature_541_residues
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAE
KVKVLLAQALFGKPDILLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDL
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
GLIAFKGTMLFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKGQ

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=538, Percent_Identity=30.2973977695167, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI10947137, Length=517, Percent_Identity=31.5280464216634, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI27881506, Length=517, Percent_Identity=31.5280464216634, Blast_Score=233, Evalue=4e-61,
Organism=Homo sapiens, GI69354671, Length=528, Percent_Identity=27.8409090909091, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI10947135, Length=528, Percent_Identity=27.8409090909091, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=26.4462809917355, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=26.4462809917355, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI30795238, Length=219, Percent_Identity=28.7671232876712, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI27881501, Length=219, Percent_Identity=28.7671232876712, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI105990541, Length=204, Percent_Identity=29.9019607843137, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI21536376, Length=230, Percent_Identity=24.3478260869565, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI255708477, Length=210, Percent_Identity=28.0952380952381, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=46.1393596986817, Blast_Score=527, Evalue=1e-151,
Organism=Escherichia coli, GI1789751, Length=510, Percent_Identity=33.921568627451, Blast_Score=284, Evalue=8e-78,
Organism=Escherichia coli, GI2367384, Length=533, Percent_Identity=30.5816135084428, Blast_Score=242, Evalue=4e-65,
Organism=Escherichia coli, GI1787182, Length=514, Percent_Identity=29.9610894941634, Blast_Score=213, Evalue=4e-56,
Organism=Escherichia coli, GI1790525, Length=497, Percent_Identity=22.9376257545272, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=29.535864978903, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1786398, Length=261, Percent_Identity=25.2873563218391, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789864, Length=221, Percent_Identity=24.8868778280543, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789891, Length=222, Percent_Identity=25.6756756756757, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786703, Length=229, Percent_Identity=29.6943231441048, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788225, Length=251, Percent_Identity=23.9043824701195, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788165, Length=216, Percent_Identity=23.1481481481481, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=27.2300469483568, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=21.52466367713, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=545, Percent_Identity=29.1743119266055, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17555318, Length=541, Percent_Identity=27.7264325323475, Blast_Score=212, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI17559834, Length=544, Percent_Identity=26.2867647058824, Blast_Score=195, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI17565586, Length=220, Percent_Identity=26.3636363636364, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17558664, Length=218, Percent_Identity=29.3577981651376, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=229, Percent_Identity=27.5109170305677, Blast_Score=69, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=530, Percent_Identity=33.5849056603774, Blast_Score=252, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6321121, Length=534, Percent_Identity=26.9662921348315, Blast_Score=194, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6325030, Length=380, Percent_Identity=25.7894736842105, Blast_Score=107, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=370, Percent_Identity=24.3243243243243, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6323278, Length=367, Percent_Identity=23.433242506812, Blast_Score=94, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24666836, Length=546, Percent_Identity=29.8534798534799, Blast_Score=251, Evalue=8e-67,
Organism=Drosophila melanogaster, GI24642252, Length=523, Percent_Identity=28.2982791586998, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI18859989, Length=523, Percent_Identity=28.2982791586998, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24641342, Length=518, Percent_Identity=27.7992277992278, Blast_Score=201, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61100; Mature: 61100

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHI
CEEEECEEEEEHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGERLAVLKQNHFEYEEFPVLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELE
CCCCEEEEEECCCCCCHHCCHHHHHHHCHHHHHHHHHHCCCEEEECCCCCCCCCEEHHCC
GEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAEKVKVLLAQALFGKPDILLLD
CCHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
EPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPS
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SRRYPFVGFTPEREVGNDLLTVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTT
CCCCCEECCCCCHHHCCCEEEECCCHHCCCHHHHHCCEEEEEECCCEEEEECCCCHHHHH
LFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDLNLVEWLRQFSPQDESESFLR
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
GFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCC
GLIAFKGTMLFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKG
CEEEEEEEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC
Q
C
>Mature Secondary Structure
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPSTGDIHI
CEEEECEEEEEHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGERLAVLKQNHFEYEEFPVLETVIMGHTQLYKVMQEKNAIYMKEDFSDEDGMRAAELE
CCCCEEEEEECCCCCCHHCCHHHHHHHCHHHHHHHHHHCCCEEEECCCCCCCCCEEHHCC
GEFAELNGWEAESEAAILLKGLGIGEDLHDKKLSELTGAEKVKVLLAQALFGKPDILLLD
CCHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
EPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALKLTQDANKKKEEKVKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIRPS
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SRRYPFVGFTPEREVGNDLLTVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTT
CCCCCEECCCCCHHHCCCEEEECCCHHCCCHHHHHCCEEEEEECCCEEEEECCCCHHHHH
LFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSKYFENSDLNLVEWLRQFSPQDESESFLR
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
GFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVITLDDPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCC
GLIAFKGTMLFTSHDHQFVQTIANRIIEVTPNGVIDKEATYDEFLENEELQKQVDAMYKG
CEEEEEEEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]