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The map label for this gene is dapA1 [H]

Identifier: 218903954

GI number: 218903954

Start: 2693675

End: 2694571

Strand: Reverse

Name: dapA1 [H]

Synonym: BCAH820_2838

Alternate gene names: 218903954

Gene position: 2694571-2693675 (Counterclockwise)

Preceding gene: 218903955

Following gene: 218903953

Centisome position: 50.82

GC content: 36.12

Gene sequence:

>897_bases
ATGAAAATAATTAAAGGGGCATTTCCAGTATTAATCACACCGATGGATGAGTTTCAAGAAATTAATTGGAACGGTGTAAA
ACAAAACGTAAACTACTTTATTGAGCAAAAAGTGGCTGGCATTATTATAAACGGAAGCACAGGAGAGTTTGTTAGTTTGT
CAAAAGAAGAACGATTTAAAATGGTAGAAACAGTATTAAAAGAAGTTAATGGCCGTATTCCGGTTATTGTTGGAACTGCA
GCAGAAACGACGAAAGAAACGATTGAATTTACAAAACATGCAGAAACGCACGGAGCGGACTGCGCATTAATTATTAACTC
ATACTATTGTAAGCCAAAAGAAGAGGAAATTTATTTTCACTTTAAAGAAATCTCAAATGCTGTAAATATACCAATTATGT
TATATAATAACCCGTTTACATCTGGTGTTGATATGAGTACAGAACTCATGCTACGTATCGGGAAAGACTGTGAAAATGTT
ACACATATTAAAGAATCTAGCGGAGATATTCGAAAAGCAAGAGATTTAGTAAGACAAGGCGAAGGTGCTTTTCAAGTCTT
CTGCGGATCTGAAGATTTAGTTATGGAATCTTATTTAGTTGGTGCGACGGGATGGGTTTCAGTAGCAGGAAATGTTGTAC
CGGGACTTGTTACGAAAATGTATGAGCATTTTCAAAATGGTGAATTAGAAAAAGCTTGGGAAATAAACGATGCAATTTTA
CCTCTTTGTGAGTTTCTTGAAGGATCAGGGAAATATGTGCAAATCGTGAAACGTTCTATGGAATTACAGGGGCAAGCTGG
GGGACCTTCTCGTTATCCAAGACTTGGGTTAACTGAAGAAGAAGATCAAAAACTTCAAGCGATTATTTCAAAAATTGCAG
CTCATGCAGCTGTTTAA

Upstream 100 bases:

>100_bases
AGAGGTTTTATTACAGGGGTGCAGACATTTCTACTAGACCCTACAGATCCATTTCCAGCAGGATTTTTATTAAAATAAAA
TGGTAAGGGGAGAGATAAAT

Downstream 100 bases:

>100_bases
TTAAGGAGGAGAGCATATATGTTAACGACAAATATTGAGTTGAAACCAAAAGTAAAAGCGTTTTTAGATGAAGAGATTAA
AATGTTTATTAATGGTGAAT

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKIIKGAFPVLITPMDEFQEINWNGVKQNVNYFIEQKVAGIIINGSTGEFVSLSKEERFKMVETVLKEVNGRIPVIVGTA
AETTKETIEFTKHAETHGADCALIINSYYCKPKEEEIYFHFKEISNAVNIPIMLYNNPFTSGVDMSTELMLRIGKDCENV
THIKESSGDIRKARDLVRQGEGAFQVFCGSEDLVMESYLVGATGWVSVAGNVVPGLVTKMYEHFQNGELEKAWEINDAIL
PLCEFLEGSGKYVQIVKRSMELQGQAGGPSRYPRLGLTEEEDQKLQAIISKIAAHAAV

Sequences:

>Translated_298_residues
MKIIKGAFPVLITPMDEFQEINWNGVKQNVNYFIEQKVAGIIINGSTGEFVSLSKEERFKMVETVLKEVNGRIPVIVGTA
AETTKETIEFTKHAETHGADCALIINSYYCKPKEEEIYFHFKEISNAVNIPIMLYNNPFTSGVDMSTELMLRIGKDCENV
THIKESSGDIRKARDLVRQGEGAFQVFCGSEDLVMESYLVGATGWVSVAGNVVPGLVTKMYEHFQNGELEKAWEINDAIL
PLCEFLEGSGKYVQIVKRSMELQGQAGGPSRYPRLGLTEEEDQKLQAIISKIAAHAAV
>Mature_298_residues
MKIIKGAFPVLITPMDEFQEINWNGVKQNVNYFIEQKVAGIIINGSTGEFVSLSKEERFKMVETVLKEVNGRIPVIVGTA
AETTKETIEFTKHAETHGADCALIINSYYCKPKEEEIYFHFKEISNAVNIPIMLYNNPFTSGVDMSTELMLRIGKDCENV
THIKESSGDIRKARDLVRQGEGAFQVFCGSEDLVMESYLVGATGWVSVAGNVVPGLVTKMYEHFQNGELEKAWEINDAIL
PLCEFLEGSGKYVQIVKRSMELQGQAGGPSRYPRLGLTEEEDQKLQAIISKIAAHAAV

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=287, Percent_Identity=25.7839721254355, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI13540533, Length=279, Percent_Identity=30.8243727598566, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI87082415, Length=267, Percent_Identity=27.7153558052434, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1786463, Length=266, Percent_Identity=27.8195488721804, Blast_Score=147, Evalue=6e-37,
Organism=Escherichia coli, GI1788823, Length=240, Percent_Identity=29.5833333333333, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1789620, Length=234, Percent_Identity=23.5042735042735, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33163; Mature: 33163

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00665 DHDPS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIKGAFPVLITPMDEFQEINWNGVKQNVNYFIEQKVAGIIINGSTGEFVSLSKEERFK
CCCCCCCCCEEECCHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEECCHHHHHH
MVETVLKEVNGRIPVIVGTAAETTKETIEFTKHAETHGADCALIINSYYCKPKEEEIYFH
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHEEE
FKEISNAVNIPIMLYNNPFTSGVDMSTELMLRIGKDCENVTHIKESSGDIRKARDLVRQG
HHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCC
EGAFQVFCGSEDLVMESYLVGATGWVSVAGNVVPGLVTKMYEHFQNGELEKAWEINDAIL
CCCEEEEECCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHH
PLCEFLEGSGKYVQIVKRSMELQGQAGGPSRYPRLGLTEEEDQKLQAIISKIAAHAAV
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIIKGAFPVLITPMDEFQEINWNGVKQNVNYFIEQKVAGIIINGSTGEFVSLSKEERFK
CCCCCCCCCEEECCHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEECCHHHHHH
MVETVLKEVNGRIPVIVGTAAETTKETIEFTKHAETHGADCALIINSYYCKPKEEEIYFH
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHEEE
FKEISNAVNIPIMLYNNPFTSGVDMSTELMLRIGKDCENVTHIKESSGDIRKARDLVRQG
HHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCC
EGAFQVFCGSEDLVMESYLVGATGWVSVAGNVVPGLVTKMYEHFQNGELEKAWEINDAIL
CCCEEEEECCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHH
PLCEFLEGSGKYVQIVKRSMELQGQAGGPSRYPRLGLTEEEDQKLQAIISKIAAHAAV
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]