| Definition | Bacillus cereus AH820, complete genome. |
|---|---|
| Accession | NC_011773 |
| Length | 5,302,683 |
Click here to switch to the map view.
The map label for this gene is helD [H]
Identifier: 218903937
GI number: 218903937
Start: 2674645
End: 2676714
Strand: Reverse
Name: helD [H]
Synonym: BCAH820_2821
Alternate gene names: 218903937
Gene position: 2676714-2674645 (Counterclockwise)
Preceding gene: 218903939
Following gene: 218903936
Centisome position: 50.48
GC content: 34.83
Gene sequence:
>2070_bases ATGAACAACATTTTTGAAGAAGAGTTACAAAAAATGAAAGATACATTACGTACGATGGATGATCAATTAGAACAGCTTGA AAAAATCCCAGTTTATTATGGCGATGATTTTAAAGAGCAAATTCTTGAAAGTATGAGGGAGTCTAATAGACAAAACTTAC GTATTGGTGTACAAGAACCGTACTTTGGAAGATTAGATTTTCAAGAGGATGGCAAGGAAGAAGTTATGCCGATCTACATC GGTAAGGTAGGTGTTTCAGATAAAGATACGATGAAACCAATTGTAATTGATTGGCGGGCACCTGTCGCAAGTATGTTTTA TTCATTTACCGGCGGTGATGAATTAGCGTTTTATCAATCACCAGACGGATTAGTAGAAGGTGATGTTTATTTAAAGCGAA ACATCTCTATTCGAAAAAGAGAATTAGAACGTGTTGTTGATACATATGTAAAAGGAAATGAAGATGTCTCGCATGCCGAT GATTTTCTTCTATATCGATTAGGTGAGAATAAAGATAATAAACTAAAGGATATTGTTTCGACGATACAATCGGAGCAAAA TGATATTATTCGTGCGGAAAGAAACTTACCATTACTTATTCAAGGGGTTGCAGGAAGCGGTAAAACAACAATCGCTTTAC ATCGCCTTGCTTTTTTAATTTATGAATATCGTGAGCAATTAGAAGCGGAGCGAATGATTGTTTTCGCTCCGAATAGTCTG TTTTTAGACTATATTTCGAGTGTACTTCCTGAATTAGGTGTAGGGAATATTAGTCAAATAACATTTCTGGACTGGGCATT ACGTACATTAGATGATTCGGTGAAACTGAAGCAGACAGAAGAAAAGTTGAAAGAAGCATTTTCTATTAATCGTGATGAAA GAAAGGTTATGCTTGGTAAATTGAAAGGTACGCTAGAATTTAAGTCCTTTATTGAAGAGCAAATGGTTCAAATTGAAAAA GAACTAGTACCAACAATTAATTTTGAGGCATGGGATAAAGCTGTTATTCCAGTGGAAGATATTAAAAAGTGGATGCAAGT CGAATATAAACACTATCCATTAAAGAAAAGAAGAGAACGTCTAGTCGGCCGAATGAAACGCTGGATTGAAATTGAACTGA AAAAGTATGAAGAAACAAACGAGAAAAAATTACTCAAAAAAGAAGCAACTAAAAGACTGAACACTTACATGAAGTTTTGG CCGAAAATGAGTGCTCTTTCACTGTATAGTTCAATATTAAAGAGTAAGGAAATACTCGGAGTATTACCTGAAGAACTTGT TAAAGAAACAGAAAAGAATTGTCGTAAAAAAGAAGTGTATGTAGAAGATTTACCTGCTTTAATATACATACATCACCGCA TCACAGGTATTGAAATTGGACAAAAGTTTCATCACGTCGTTATCGATGAAGCGCAAGATTTCTCGCCATTCCAAGTTTAT GTATTAAAAGAAATTACACTAGGTAACTCTTTCACTATATTAGGTGATTTATCTCAAGCGATTTATGATTATCAAGGGAT TGAAGATTGGAGTGCGTTTAAGGAAGTATTCCAAGAAACAGGTTATTATGAACTGACGAGAAGTTATCGTTCTACAAAAG AAATTATTGAATTCGCAAATGAGATAATAAAAAATGCAGAAATTCCTGTAGGGCTTGCAATGCCAGTTTTCCGTAGTGGA GAAGAAGTAAAAGTAATTCATACAGAAGATCAGTTTACTGAAATTTTGAAGACATTAAAACAGCTACAAAATGCAGATGT GAAAACAATTGCGGTAATCGGAAGAACAGACGATGAATGCCGCGATATGTATGAGAAATTAACGAATGCAGGATTGACTG TAAACGTCATTGAAGCAGATCAAAGTAAATATGAAGGGGGCATTTCGGTAGTACCTGTATACTTAGCGAAAGGGTTAGAA TTTGATGCTGCTCTACTCATTGATGTCGATGAAGAACATTATAAAAATACGAAACACGATGCGAAGTTATTATATGTCGG ATGTACAAGGTCGCTTCATGATTTATGGATTTTCCATAGCGGGGAAGCATCTCCATTAATTAAGAAGTAA
Upstream 100 bases:
>100_bases TTTTCAGAAAAAACAAATTAAGTCCTTGACTTTATAATTGGATTTTTAATACAATTATATTTCGACTGAAAAATTAGAAC GGATAGGAGGGAATCATCTA
Downstream 100 bases:
>100_bases AAATTCAAATGGTTTTTCAATAGAGAAGCATCTTATTTTATAAAAATATAGGGGACATGATAATGATTACAAAAGTAATA ACAAAAAGAAATTGGGAAAT
Product: uvrD/Rep helicase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 689; Mature: 689
Protein sequence:
>689_residues MNNIFEEELQKMKDTLRTMDDQLEQLEKIPVYYGDDFKEQILESMRESNRQNLRIGVQEPYFGRLDFQEDGKEEVMPIYI GKVGVSDKDTMKPIVIDWRAPVASMFYSFTGGDELAFYQSPDGLVEGDVYLKRNISIRKRELERVVDTYVKGNEDVSHAD DFLLYRLGENKDNKLKDIVSTIQSEQNDIIRAERNLPLLIQGVAGSGKTTIALHRLAFLIYEYREQLEAERMIVFAPNSL FLDYISSVLPELGVGNISQITFLDWALRTLDDSVKLKQTEEKLKEAFSINRDERKVMLGKLKGTLEFKSFIEEQMVQIEK ELVPTINFEAWDKAVIPVEDIKKWMQVEYKHYPLKKRRERLVGRMKRWIEIELKKYEETNEKKLLKKEATKRLNTYMKFW PKMSALSLYSSILKSKEILGVLPEELVKETEKNCRKKEVYVEDLPALIYIHHRITGIEIGQKFHHVVIDEAQDFSPFQVY VLKEITLGNSFTILGDLSQAIYDYQGIEDWSAFKEVFQETGYYELTRSYRSTKEIIEFANEIIKNAEIPVGLAMPVFRSG EEVKVIHTEDQFTEILKTLKQLQNADVKTIAVIGRTDDECRDMYEKLTNAGLTVNVIEADQSKYEGGISVVPVYLAKGLE FDAALLIDVDEEHYKNTKHDAKLLYVGCTRSLHDLWIFHSGEASPLIKK
Sequences:
>Translated_689_residues MNNIFEEELQKMKDTLRTMDDQLEQLEKIPVYYGDDFKEQILESMRESNRQNLRIGVQEPYFGRLDFQEDGKEEVMPIYI GKVGVSDKDTMKPIVIDWRAPVASMFYSFTGGDELAFYQSPDGLVEGDVYLKRNISIRKRELERVVDTYVKGNEDVSHAD DFLLYRLGENKDNKLKDIVSTIQSEQNDIIRAERNLPLLIQGVAGSGKTTIALHRLAFLIYEYREQLEAERMIVFAPNSL FLDYISSVLPELGVGNISQITFLDWALRTLDDSVKLKQTEEKLKEAFSINRDERKVMLGKLKGTLEFKSFIEEQMVQIEK ELVPTINFEAWDKAVIPVEDIKKWMQVEYKHYPLKKRRERLVGRMKRWIEIELKKYEETNEKKLLKKEATKRLNTYMKFW PKMSALSLYSSILKSKEILGVLPEELVKETEKNCRKKEVYVEDLPALIYIHHRITGIEIGQKFHHVVIDEAQDFSPFQVY VLKEITLGNSFTILGDLSQAIYDYQGIEDWSAFKEVFQETGYYELTRSYRSTKEIIEFANEIIKNAEIPVGLAMPVFRSG EEVKVIHTEDQFTEILKTLKQLQNADVKTIAVIGRTDDECRDMYEKLTNAGLTVNVIEADQSKYEGGISVVPVYLAKGLE FDAALLIDVDEEHYKNTKHDAKLLYVGCTRSLHDLWIFHSGEASPLIKK >Mature_689_residues MNNIFEEELQKMKDTLRTMDDQLEQLEKIPVYYGDDFKEQILESMRESNRQNLRIGVQEPYFGRLDFQEDGKEEVMPIYI GKVGVSDKDTMKPIVIDWRAPVASMFYSFTGGDELAFYQSPDGLVEGDVYLKRNISIRKRELERVVDTYVKGNEDVSHAD DFLLYRLGENKDNKLKDIVSTIQSEQNDIIRAERNLPLLIQGVAGSGKTTIALHRLAFLIYEYREQLEAERMIVFAPNSL FLDYISSVLPELGVGNISQITFLDWALRTLDDSVKLKQTEEKLKEAFSINRDERKVMLGKLKGTLEFKSFIEEQMVQIEK ELVPTINFEAWDKAVIPVEDIKKWMQVEYKHYPLKKRRERLVGRMKRWIEIELKKYEETNEKKLLKKEATKRLNTYMKFW PKMSALSLYSSILKSKEILGVLPEELVKETEKNCRKKEVYVEDLPALIYIHHRITGIEIGQKFHHVVIDEAQDFSPFQVY VLKEITLGNSFTILGDLSQAIYDYQGIEDWSAFKEVFQETGYYELTRSYRSTKEIIEFANEIIKNAEIPVGLAMPVFRSG EEVKVIHTEDQFTEILKTLKQLQNADVKTIAVIGRTDDECRDMYEKLTNAGLTVNVIEADQSKYEGGISVVPVYLAKGLE FDAALLIDVDEEHYKNTKHDAKLLYVGCTRSLHDLWIFHSGEASPLIKK
Specific function: Catalyzes the unwinding of duplex DNA in the 3' to 5' direction; this reaction is dependent on the hydrolysis of ATP [H]
COG id: COG3973
COG function: function code R; Superfamily I DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 uvrD-like helicase ATP-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000212 - InterPro: IPR014016 [H]
Pfam domain/function: PF00580 UvrD-helicase [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 79969; Mature: 79969
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIFEEELQKMKDTLRTMDDQLEQLEKIPVYYGDDFKEQILESMRESNRQNLRIGVQEP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCEEEECCCC YFGRLDFQEDGKEEVMPIYIGKVGVSDKDTMKPIVIDWRAPVASMFYSFTGGDELAFYQS CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEC PDGLVEGDVYLKRNISIRKRELERVVDTYVKGNEDVSHADDFLLYRLGENKDNKLKDIVS CCCCEECCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHCEEEEEECCCCCHHHHHHHH TIQSEQNDIIRAERNLPLLIQGVAGSGKTTIALHRLAFLIYEYREQLEAERMIVFAPNSL HHHCCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHH FLDYISSVLPELGVGNISQITFLDWALRTLDDSVKLKQTEEKLKEAFSINRDERKVMLGK HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH LKGTLEFKSFIEEQMVQIEKELVPTINFEAWDKAVIPVEDIKKWMQVEYKHYPLKKRRER HHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH LVGRMKRWIEIELKKYEETNEKKLLKKEATKRLNTYMKFWPKMSALSLYSSILKSKEILG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VLPEELVKETEKNCRKKEVYVEDLPALIYIHHRITGIEIGQKFHHVVIDEAQDFSPFQVY CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCHHHHHHHHHHHEECCCCCCCCEEEE VLKEITLGNSFTILGDLSQAIYDYQGIEDWSAFKEVFQETGYYELTRSYRSTKEIIEFAN EEEEEECCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EIIKNAEIPVGLAMPVFRSGEEVKVIHTEDQFTEILKTLKQLQNADVKTIAVIGRTDDEC HHHHCCCCCCCEECHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHH RDMYEKLTNAGLTVNVIEADQSKYEGGISVVPVYLAKGLEFDAALLIDVDEEHYKNTKHD HHHHHHHHCCCCEEEEEECCCHHHCCCCEEEHHHHHCCCCCCEEEEEECCHHHCCCCCCC AKLLYVGCTRSLHDLWIFHSGEASPLIKK CEEEEEECCCCHHHEEEEECCCCCCCCCC >Mature Secondary Structure MNNIFEEELQKMKDTLRTMDDQLEQLEKIPVYYGDDFKEQILESMRESNRQNLRIGVQEP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCEEEECCCC YFGRLDFQEDGKEEVMPIYIGKVGVSDKDTMKPIVIDWRAPVASMFYSFTGGDELAFYQS CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEC PDGLVEGDVYLKRNISIRKRELERVVDTYVKGNEDVSHADDFLLYRLGENKDNKLKDIVS CCCCEECCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHCEEEEEECCCCCHHHHHHHH TIQSEQNDIIRAERNLPLLIQGVAGSGKTTIALHRLAFLIYEYREQLEAERMIVFAPNSL HHHCCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHH FLDYISSVLPELGVGNISQITFLDWALRTLDDSVKLKQTEEKLKEAFSINRDERKVMLGK HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH LKGTLEFKSFIEEQMVQIEKELVPTINFEAWDKAVIPVEDIKKWMQVEYKHYPLKKRRER HHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH LVGRMKRWIEIELKKYEETNEKKLLKKEATKRLNTYMKFWPKMSALSLYSSILKSKEILG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VLPEELVKETEKNCRKKEVYVEDLPALIYIHHRITGIEIGQKFHHVVIDEAQDFSPFQVY CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCHHHHHHHHHHHEECCCCCCCCEEEE VLKEITLGNSFTILGDLSQAIYDYQGIEDWSAFKEVFQETGYYELTRSYRSTKEIIEFAN EEEEEECCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EIIKNAEIPVGLAMPVFRSGEEVKVIHTEDQFTEILKTLKQLQNADVKTIAVIGRTDDEC HHHHCCCCCCCEECHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHH RDMYEKLTNAGLTVNVIEADQSKYEGGISVVPVYLAKGLEFDAALLIDVDEEHYKNTKHD HHHHHHHHCCCCEEEEEECCCHHHCCCCEEEHHHHHCCCCCCEEEEEECCHHHCCCCCCC AKLLYVGCTRSLHDLWIFHSGEASPLIKK CEEEEEECCCCHHHEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]