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The map label for this gene is rihB [H]

Identifier: 218903531

GI number: 218903531

Start: 2299586

End: 2300527

Strand: Reverse

Name: rihB [H]

Synonym: BCAH820_2415

Alternate gene names: 218903531

Gene position: 2300527-2299586 (Counterclockwise)

Preceding gene: 218903532

Following gene: 218903528

Centisome position: 43.38

GC content: 38.96

Gene sequence:

>942_bases
ATGATGAAAAAAGTGTACTTCAATCATGATGGTGGTGTAGATGATTTAGTTTCACTATTTTTATTACTCCAAATGGATAA
TGTAGAACTTACAGGTGTTTCAGTTATCCCAGCAGATTGCTATTTAGAACCAGCAATGTCTGCAAGTCGAAAAATTATTG
ATCGCTTCGGCAAAAATACTATTGAGGTAGCAGCTTCTAATTCTCGTGGAAAAAATCCGTTTCCAAAAGACTGGCGGATG
CATGCATTTTATGTAGATACTTTACCCATTTTAAATGAGTCTGGAAAAGTTGTAACGCACGTAGCAGCAAAGCCTGCGCA
TCATCATTTAATTGAGACTCTTCTACAAACTGAAGAGAAAACAACTTTATTATTTACAGGTCCTCTTACCGATTTAGCCC
GTGCACTATATGAAGCACCTATAATCGAAAATAAAATTAAACGTTTAGTTTGGATGGGCGGTACATTTCGTACTGCAGGC
AATGTACATGAATCTGAACATGATGGAACAGCCGAATGGAATTCGTTTTGGGACCCTGAAGCAGTAGCTCGCGTATGGGA
AGCAAATATAGAAATCGACTTAGTAACTCTAGAGAGTACAAACCAAGTTCCCCTAACTATAGACATACGTGAACAATGGG
CAAAAGAGCGAAAGTATATCGGTATTGATTTCCTTGGTCAATGTTATGCAATTGTTCCCCCTCTCGTTCACTTTGCAAAG
AACTCTACCTACTATTTGTGGGATGTATTAACTGCTGCCTTTGTTGGGAAAGCTGACCTAGCAAAAGTACAAACGATCAA
TAGTATCGTCTATACATACGGACCAAGCCAAGGACGTACAGTGGAAACTGATGATGGGCGGCCGGTACATGTTGTTTATG
ATGTAAACCACGATCGATTTTTCGACTATATAACTCGGTTAGCAAAGAAAGTCTCTACTTAA

Upstream 100 bases:

>100_bases
GCTATTGATTAATGGAAAAATTGAGGTAGTAGAAATAATCAATGATTTTTCCAAAATGAAAATTTAATTTCTAGTTAAAT
ATTAGAAAATGGAGATTACA

Downstream 100 bases:

>100_bases
AAGCTTCTGTATATAAACAACAAAAAAATGGTGTAGCTTCAAATTGTACGTAGTAAAAAATAATTGGAAATTGGTTGGAA
CTTAATATTAAAAAGAGTAT

Product: inosine-uridine preferring nucleoside hydrolase family protein

Products: NA

Alternate protein names: Cytidine/uridine-specific hydrolase [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MMKKVYFNHDGGVDDLVSLFLLLQMDNVELTGVSVIPADCYLEPAMSASRKIIDRFGKNTIEVAASNSRGKNPFPKDWRM
HAFYVDTLPILNESGKVVTHVAAKPAHHHLIETLLQTEEKTTLLFTGPLTDLARALYEAPIIENKIKRLVWMGGTFRTAG
NVHESEHDGTAEWNSFWDPEAVARVWEANIEIDLVTLESTNQVPLTIDIREQWAKERKYIGIDFLGQCYAIVPPLVHFAK
NSTYYLWDVLTAAFVGKADLAKVQTINSIVYTYGPSQGRTVETDDGRPVHVVYDVNHDRFFDYITRLAKKVST

Sequences:

>Translated_313_residues
MMKKVYFNHDGGVDDLVSLFLLLQMDNVELTGVSVIPADCYLEPAMSASRKIIDRFGKNTIEVAASNSRGKNPFPKDWRM
HAFYVDTLPILNESGKVVTHVAAKPAHHHLIETLLQTEEKTTLLFTGPLTDLARALYEAPIIENKIKRLVWMGGTFRTAG
NVHESEHDGTAEWNSFWDPEAVARVWEANIEIDLVTLESTNQVPLTIDIREQWAKERKYIGIDFLGQCYAIVPPLVHFAK
NSTYYLWDVLTAAFVGKADLAKVQTINSIVYTYGPSQGRTVETDDGRPVHVVYDVNHDRFFDYITRLAKKVST
>Mature_313_residues
MMKKVYFNHDGGVDDLVSLFLLLQMDNVELTGVSVIPADCYLEPAMSASRKIIDRFGKNTIEVAASNSRGKNPFPKDWRM
HAFYVDTLPILNESGKVVTHVAAKPAHHHLIETLLQTEEKTTLLFTGPLTDLARALYEAPIIENKIKRLVWMGGTFRTAG
NVHESEHDGTAEWNSFWDPEAVARVWEANIEIDLVTLESTNQVPLTIDIREQWAKERKYIGIDFLGQCYAIVPPLVHFAK
NSTYYLWDVLTAAFVGKADLAKVQTINSIVYTYGPSQGRTVETDDGRPVHVVYDVNHDRFFDYITRLAKKVST

Specific function: Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively. Has a clear preference for cytidine over uridine. Strictly specific for ribonucleosides [H]

COG id: COG1957

COG function: function code F; Inosine-uridine nucleoside N-ribohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IUNH family. RihB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788486, Length=214, Percent_Identity=24.7663551401869, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015910
- InterPro:   IPR023186
- InterPro:   IPR001910
- InterPro:   IPR022977 [H]

Pfam domain/function: PF01156 IU_nuc_hydro [H]

EC number: =3.2.2.8 [H]

Molecular weight: Translated: 35386; Mature: 35386

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKVYFNHDGGVDDLVSLFLLLQMDNVELTGVSVIPADCYLEPAMSASRKIIDRFGKNT
CCCEEEECCCCCHHHHHHHHHHHEECCEEEEEEEEECCHHEECHHHHHHHHHHHHHCCCE
IEVAASNSRGKNPFPKDWRMHAFYVDTLPILNESGKVVTHVAAKPAHHHLIETLLQTEEK
EEEEECCCCCCCCCCCCCEEEEEEEECCCEECCCCCEEEEEECCCHHHHHHHHHHCCCCC
TTLLFTGPLTDLARALYEAPIIENKIKRLVWMGGTFRTAGNVHESEHDGTAEWNSFWDPE
EEEEEECCHHHHHHHHHHCCHHHHHHHHHEECCCCEECCCCCCCCCCCCCCCCCCCCCHH
AVARVWEANIEIDLVTLESTNQVPLTIDIREQWAKERKYIGIDFLGQCYAIVPPLVHFAK
HHHHHHHCCCEEEEEEECCCCCCEEEEEHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHC
NSTYYLWDVLTAAFVGKADLAKVQTINSIVYTYGPSQGRTVETDDGRPVHVVYDVNHDRF
CCCEEHHHHHHHHHHCCHHHHHHHHHHEEEEEECCCCCCEEECCCCCEEEEEEECCCHHH
FDYITRLAKKVST
HHHHHHHHHHHCC
>Mature Secondary Structure
MMKKVYFNHDGGVDDLVSLFLLLQMDNVELTGVSVIPADCYLEPAMSASRKIIDRFGKNT
CCCEEEECCCCCHHHHHHHHHHHEECCEEEEEEEEECCHHEECHHHHHHHHHHHHHCCCE
IEVAASNSRGKNPFPKDWRMHAFYVDTLPILNESGKVVTHVAAKPAHHHLIETLLQTEEK
EEEEECCCCCCCCCCCCCEEEEEEEECCCEECCCCCEEEEEECCCHHHHHHHHHHCCCCC
TTLLFTGPLTDLARALYEAPIIENKIKRLVWMGGTFRTAGNVHESEHDGTAEWNSFWDPE
EEEEEECCHHHHHHHHHHCCHHHHHHHHHEECCCCEECCCCCCCCCCCCCCCCCCCCCHH
AVARVWEANIEIDLVTLESTNQVPLTIDIREQWAKERKYIGIDFLGQCYAIVPPLVHFAK
HHHHHHHCCCEEEEEEECCCCCCEEEEEHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHC
NSTYYLWDVLTAAFVGKADLAKVQTINSIVYTYGPSQGRTVETDDGRPVHVVYDVNHDRF
CCCEEHHHHHHHHHHCCHHHHHHHHHHEEEEEECCCCCCEEECCCCCEEEEEEECCCHHH
FDYITRLAKKVST
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA