Click here to switch to the map view.

The map label for this gene is yfeT [C]

Identifier: 218903408

GI number: 218903408

Start: 2175458

End: 2175796

Strand: Direct

Name: yfeT [C]

Synonym: BCAH820_2292

Alternate gene names: 218903408

Gene position: 2175458-2175796 (Clockwise)

Preceding gene: 218903407

Following gene: 218903409

Centisome position: 41.03

GC content: 38.64

Gene sequence:

>339_bases
ATGGGAGCGGGTTTACTCTCGAAAAATTCAGTTGTTATCGGCATTTCTCATTCTGGTAGCGATAAAGGGTTACTTGAAGC
GTTAGAAGTAGCGAAAGCAAGAGGTGCTAAAATTATTGCGATTACGAGCTATCAGAAATCGGCATTAAGTCAACTTACTG
ATATAACGCTCTATACTTCAACACGTGAGACAGAATTCCGCACAGAAGCAAGTTCATCACGATTAGCACAGTTAAGTTTA
ATTGATACTTTGTATGTAGGATTGTCGTTGCAACGACAGGAGGAAACGTTAAAACATTTACAAAGTATACGTGAAACGAT
TTCGATGAGGCGAAAATAA

Upstream 100 bases:

>100_bases
TGGAAATGGTGGCTCTGGTATTATTGCGACGGATGTGTAGCATAAGTTTATGAGAACGGGTATTTCATGTATCGCTCATA
CTGATTCGCATTTCTAAATT

Downstream 100 bases:

>100_bases
GAAAAGCTCTTCAAATGAAGTGCTTTTTTTATTTTCTTGTAGAAATATGTGGCTTACTTATAGCCAGTGATAGACTCTCA
TTTTTAAAAATATAAAATAA

Product: transcriptional regulator, RpiR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MGAGLLSKNSVVIGISHSGSDKGLLEALEVAKARGAKIIAITSYQKSALSQLTDITLYTSTRETEFRTEASSSRLAQLSL
IDTLYVGLSLQRQEETLKHLQSIRETISMRRK

Sequences:

>Translated_112_residues
MGAGLLSKNSVVIGISHSGSDKGLLEALEVAKARGAKIIAITSYQKSALSQLTDITLYTSTRETEFRTEASSSRLAQLSL
IDTLYVGLSLQRQEETLKHLQSIRETISMRRK
>Mature_111_residues
GAGLLSKNSVVIGISHSGSDKGLLEALEVAKARGAKIIAITSYQKSALSQLTDITLYTSTRETEFRTEASSSRLAQLSLI
DTLYVGLSLQRQEETLKHLQSIRETISMRRK

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=96, Percent_Identity=44.7916666666667, Blast_Score=70, Evalue=2e-14,
Organism=Escherichia coli, GI87082369, Length=89, Percent_Identity=35.9550561797753, Blast_Score=62, Evalue=6e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 12268; Mature: 12137

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGLLSKNSVVIGISHSGSDKGLLEALEVAKARGAKIIAITSYQKSALSQLTDITLYTS
CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHEEEEEC
TRETEFRTEASSSRLAQLSLIDTLYVGLSLQRQEETLKHLQSIRETISMRRK
CCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GAGLLSKNSVVIGISHSGSDKGLLEALEVAKARGAKIIAITSYQKSALSQLTDITLYTS
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHEEEEEC
TRETEFRTEASSSRLAQLSLIDTLYVGLSLQRQEETLKHLQSIRETISMRRK
CCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]